Glyma02g33780 - SoyBase

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Report for Sequence Feature Glyma02g33780

Feature Type:	gene_model
Chromosome:	Gm02
Start:	37582058
stop:	37583987
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma02g33780

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G29420	AT	Annotation by Michelle Graham. TAIR10: glutathione S-transferase tau 7 \| chr2:12618111-12618871 REVERSE LENGTH=227	SoyBase	E_val: 1.00E-69	ISS
GO:0009407	GO-bp	Annotation by Michelle Graham. GO Biological Process: toxin catabolic process	SoyBase	N/A	ISS
GO:0009751	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to salicylic acid stimulus	SoyBase	N/A	ISS
GO:0010583	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to cyclopentenone	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0005829	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytosol	SoyBase	N/A	ISS
GO:0004364	GO-mf	Annotation by Michelle Graham. GO Molecular Function: glutathione transferase activity	SoyBase	N/A	ISS
KOG0406	KOG	Glutathione S-transferase	JGI		ISS
PTHR11260	Panther	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	JGI		ISS
PTHR11260:SF16	Panther	GLUTATHIONE S-TRANSFERASE THETA	JGI		ISS
PF00043	PFAM	Glutathione S-transferase, C-terminal domain	JGI		ISS
PF02798	PFAM	Glutathione S-transferase, N-terminal domain	JGI		ISS
UniRef100_Q9FQD9	UniRef	Annotation by Michelle Graham. Best UniRef hit: Glutathione S-transferase GST 19 n=1 Tax=Glycine max RepID=Q9FQD9_SOYBN	SoyBase	E_val: 2.00E-162	ISS
UniRef100_Q9FQD9	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Glutathione S-transferase GST 19 n=1 Tax=Glycine max RepID=Q9FQD9_SOYBN	SoyBase	E_val: 2.00E-162	ISS

Expression Patterns of Glyma02g33780

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g33780 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.02g187200	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma02g33780

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma02g33780

Limit To All Plant Sequences

>Glyma02g33780.1   sequence type=CDS   gene model=Glyma02g33780   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAAGAAGTGAAGCTGATTGCTACACATCAAAGCTTCCCTTGTGCCAGGGTAGAATGGGCTTTAAGGATAAAAGGTGTTGAATATGAGTACTTAAAAGAAGACTTAGCAAATAAGAGTTCTTTGCTTCTTCAATCTAACCCTGTCCACAAGAAAGTTCCAGTGCTCCTACATAATAACAAGCCTATAGCTGAATCACTTGTCATCCTGGAGTACATAGATGAGACATGGAAGAAGAACCCTTTGCTACCACTTGATCCATATGAGAGAGCACAGGCTCGCTTCTGGGCTAGGTTTATTGATGAGAAGTGTGTGTTAGCTGTATGGGGAGCTACCGTGGCGCAAGGAGAAGAGAAAGAGAAAGCTGTGGGTGCTGCACTAGAGTCTCTGGCACTTCTTGAGAAGGAAATTCAAGGGAAGAAGTATTTTGGTGGAGAGAAGATTGGTTATCTTGATATTGCAGCTGGCTGCATGTCTCTTTGGTTCAGTGTCCTGGAAGAGCTTGGAGAGATGGAGCTACTCAATGCTGAGAGGTTCCCTTCTCTTCATGAATGGAGTCAGAACTTCTTACAGACTTCACCTGTCAAAGATTGCATTCCATCCAGGGAAAGTGTGGTTGAATATTTCAGCTTTGGCATCAACTATGTGCGTTCCTTAGCAGCATCCAGTAAATCTTGA

Predicted protein sequences of Glyma02g33780

Limit To All Plant Sequences

>Glyma02g33780.1   sequence type=predicted peptide   gene model=Glyma02g33780   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEEVKLIATHQSFPCARVEWALRIKGVEYEYLKEDLANKSSLLLQSNPVHKKVPVLLHNNKPIAESLVILEYIDETWKKNPLLPLDPYERAQARFWARFIDEKCVLAVWGATVAQGEEKEKAVGAALESLALLEKEIQGKKYFGGEKIGYLDIAAGCMSLWFSVLEELGEMELLNAERFPSLHEWSQNFLQTSPVKDCIPSRESVVEYFSFGINYVRSLAASSKS*

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