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Report for Sequence Feature Glyma02g33021

Feature Type:gene_model
Chromosome:Gm02
Start:36358328
stop:36358948
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma02g33021
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G23430AT Annotation by Michelle Graham. TAIR10: phosphate 1 | chr3:8387818-8393242 REVERSE LENGTH=782 SoyBaseE_val: 3.00E-56ISS
GO:0000041GO-bp Annotation by Michelle Graham. GO Biological Process: transition metal ion transport SoyBaseN/AISS
GO:0006817GO-bp Annotation by Michelle Graham. GO Biological Process: phosphate ion transport SoyBaseN/AISS
GO:0006826GO-bp Annotation by Michelle Graham. GO Biological Process: iron ion transport SoyBaseN/AISS
GO:0009611GO-bp Annotation by Michelle Graham. GO Biological Process: response to wounding SoyBaseN/AISS
GO:0009805GO-bp Annotation by Michelle Graham. GO Biological Process: coumarin biosynthetic process SoyBaseN/AISS
GO:0010106GO-bp Annotation by Michelle Graham. GO Biological Process: cellular response to iron ion starvation SoyBaseN/AISS
GO:0010167GO-bp Annotation by Michelle Graham. GO Biological Process: response to nitrate SoyBaseN/AISS
GO:0015698GO-bp Annotation by Michelle Graham. GO Biological Process: inorganic anion transport SoyBaseN/AISS
GO:0015706GO-bp Annotation by Michelle Graham. GO Biological Process: nitrate transport SoyBaseN/AISS
GO:0016036GO-bp Annotation by Michelle Graham. GO Biological Process: cellular response to phosphate starvation SoyBaseN/AISS
GO:0005794GO-cc Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus SoyBaseN/AISS
GO:0005802GO-cc Annotation by Michelle Graham. GO Cellular Compartment: trans-Golgi network SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0016021GO-cc Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane SoyBaseN/AISS
GO:0015114GO-mf Annotation by Michelle Graham. GO Molecular Function: phosphate ion transmembrane transporter activity SoyBaseN/AISS
PTHR10783Panther XENOTROPIC AND POLYTROPIC MURINE LEUKEMIA VIRUS RECEPTOR JGI ISS
PTHR10783:SF4Panther XENOTROPIC AND POLYTROPIC MURINE LEUKEMIA VIRUS RECEPTOR XPR1 JGI ISS
PF03124PFAM EXS family JGI ISS
UniRef100_G7IJI7UniRef Annotation by Michelle Graham. Most informative UniRef hit: Pho1-like protein n=1 Tax=Medicago truncatula RepID=G7IJI7_MEDTR SoyBaseE_val: 4.00E-57ISS
UniRef100_I1LC80UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LC80_SOYBN SoyBaseE_val: 9.00E-69ISS

Expression Patterns of Glyma02g33021
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma02g33021 not represented in the dataset
Glyma02g33021 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g33021 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.02g186500 Wm82.a2.v1IGC As supplied by JGI

References for Glyma02g33021
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma02g33021
>Glyma02g33021.1   sequence type=CDS   gene model=Glyma02g33021   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTGGCAGCAGAGGCTAGAGTAACATACAGCAGGCAAAATGACAATCTATGGTTTGCTATAATCTTAATCACTTCTGTGGTGGCCACAATGTATCAATTGTACTGGGATTTTATCAAGGACTGGGGATTTCTTAATCCAAAATCCATAAATCCATGGCTTAGAAATGATCTAATTCTAAAGAATAAAAACATATACTATATGTCTATTGTCTTAAATATTGTCTTAAGAGTGACGTGGGTGGAGACTATCATGCACTTCAAAGTAGGGCCTGTTCATTCACAACTACTAGACTTTTTATTAGTTGCACTTGAGGTTATTCGGAGAGGGCATTGGAATTTCTACAAGTATTGGCTTGTTAAAACTCAATGTTTCTAA
Predicted protein sequences of Glyma02g33021
>Glyma02g33021.1   sequence type=predicted peptide   gene model=Glyma02g33021   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVAAEARVTYSRQNDNLWFAIILITSVVATMYQLYWDFIKDWGFLNPKSINPWLRNDLILKNKNIYYMSIVLNIVLRVTWVETIMHFKVGPVHSQLLDFLLVALEVIRRGHWNFYKYWLVKTQCF*






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