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Report for Sequence Feature Glyma02g32058

Feature Type:gene_model
Chromosome:Gm02
Start:35257270
stop:35266523
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma02g32058
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G32730AT Annotation by Michelle Graham. TAIR10: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit | chr2:13880189-13885464 FORWARD LENGTH=1004 SoyBaseE_val: 1.00E-15ISS
GO:0006094GO-bp Annotation by Michelle Graham. GO Biological Process: gluconeogenesis SoyBaseN/AISS
GO:0006511GO-bp Annotation by Michelle Graham. GO Biological Process: ubiquitin-dependent protein catabolic process SoyBaseN/AISS
GO:0007010GO-bp Annotation by Michelle Graham. GO Biological Process: cytoskeleton organization SoyBaseN/AISS
GO:0009630GO-bp Annotation by Michelle Graham. GO Biological Process: gravitropism SoyBaseN/AISS
GO:0010498GO-bp Annotation by Michelle Graham. GO Biological Process: proteasomal protein catabolic process SoyBaseN/AISS
GO:0042176GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of protein catabolic process SoyBaseN/AISS
GO:0043161GO-bp Annotation by Michelle Graham. GO Biological Process: proteasomal ubiquitin-dependent protein catabolic process SoyBaseN/AISS
GO:0043248GO-bp Annotation by Michelle Graham. GO Biological Process: proteasome assembly SoyBaseN/AISS
GO:0051788GO-bp Annotation by Michelle Graham. GO Biological Process: response to misfolded protein SoyBaseN/AISS
GO:0000502GO-cc Annotation by Michelle Graham. GO Cellular Compartment: proteasome complex SoyBaseN/AISS
GO:0005829GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytosol SoyBaseN/AISS
GO:0008540GO-cc Annotation by Michelle Graham. GO Cellular Compartment: proteasome regulatory particle, base subcomplex SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0030234GO-mf Annotation by Michelle Graham. GO Molecular Function: enzyme regulator activity SoyBaseN/AISS
UniRef100_G8A0B8UniRef Annotation by Michelle Graham. Most informative UniRef hit: 26S proteasome non-ATPase regulatory subunit n=1 Tax=Medicago truncatula RepID=G8A0B8_MEDTR SoyBaseE_val: 2.00E-15ISS
UniRef100_I1KQE8UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KQE8_SOYBN SoyBaseE_val: 5.00E-17ISS

Expression Patterns of Glyma02g32058
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma02g32058 not represented in the dataset
Glyma02g32058 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g32058 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.02g184400 Wm82.a2.v1IGC As supplied by JGI

References for Glyma02g32058
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma02g32058
>Glyma02g32058.1   sequence type=CDS   gene model=Glyma02g32058   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCGACGACTTTGGTGAGCTCTGTGGGTGGGATGCTTGCAATGCTGAACGAGCCACATCTCTCGGTGAAGCTTCACGCTCTCTCCAACCTCAACAACTTGGTCGAGACCTTCTGGCCTCCTCTGGTGGATTCACTCAACTATGCTGTATGCATATTCCAAGGGAATCCAGAAACTCAAGGACTCAAAGCAACTTCAGCGAATATCAACAATGATCAGTTTGGTCACAAATTTGAAATTTCATGCAAAGCACCAATGAAAAAAGGTGGGGAAATAAACAAAAACAAGTGA
Predicted protein sequences of Glyma02g32058
>Glyma02g32058.1   sequence type=predicted peptide   gene model=Glyma02g32058   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MATTLVSSVGGMLAMLNEPHLSVKLHALSNLNNLVETFWPPLVDSLNYAVCIFQGNPETQGLKATSANINNDQFGHKFEISCKAPMKKGGEINKNK*






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