|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
ATCG00470 | AT | Annotation by Michelle Graham. TAIR10: ATP synthase epsilon chain | chrC:52265-52663 REVERSE LENGTH=132 | SoyBase | E_val: 2.00E-39 | ISS |
GO:0006091 | GO-bp | Annotation by Michelle Graham. GO Biological Process: generation of precursor metabolites and energy | SoyBase | N/A | ISS |
GO:0006354 | GO-bp | Annotation by Michelle Graham. GO Biological Process: DNA-dependent transcription, elongation | SoyBase | N/A | ISS |
GO:0015979 | GO-bp | Annotation by Michelle Graham. GO Biological Process: photosynthesis | SoyBase | N/A | ISS |
GO:0015986 | GO-bp | Annotation by Michelle Graham. GO Biological Process: ATP synthesis coupled proton transport | SoyBase | N/A | ISS |
GO:0019684 | GO-bp | Annotation by Michelle Graham. GO Biological Process: photosynthesis, light reaction | SoyBase | N/A | ISS |
GO:0042776 | GO-bp | Annotation by Michelle Graham. GO Biological Process: mitochondrial ATP synthesis coupled proton transport | SoyBase | N/A | ISS |
GO:0045333 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cellular respiration | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0009534 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast thylakoid | SoyBase | N/A | ISS |
GO:0009535 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast thylakoid membrane | SoyBase | N/A | ISS |
GO:0009579 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: thylakoid | SoyBase | N/A | ISS |
GO:0009941 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast envelope | SoyBase | N/A | ISS |
GO:0045259 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: proton-transporting ATP synthase complex | SoyBase | N/A | ISS |
GO:0045261 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: proton-transporting ATP synthase complex, catalytic core F(1) | SoyBase | N/A | ISS |
GO:0046933 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism | SoyBase | N/A | ISS |
GO:0046961 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: proton-transporting ATPase activity, rotational mechanism | SoyBase | N/A | ISS |
PTHR13822 | Panther | ATP SYNTHASE DELTA/EPSILON CHAIN | JGI | ISS | |
PTHR13822:SF3 | Panther | ATP SYNTHASE EPISILON CHAIN | JGI | ISS | |
PF00401 | PFAM | ATP synthase, Delta/Epsilon chain, long alpha-helix domain | JGI | ISS | |
UniRef100_I1JG91 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=2 Tax=Glycine max RepID=I1JG91_SOYBN | SoyBase | E_val: 2.00E-43 | ISS |
UniRef100_Q2PMU9 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: ATP synthase epsilon chain, chloroplastic n=2 Tax=Glycine max RepID=ATPE_SOYBN | SoyBase | E_val: 4.00E-40 | ISS |
Glyma02g31971 not represented in the dataset |
Glyma02g31971 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma02g31971.1 sequence type=CDS gene model=Glyma02g31971 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCTCTAATGGGCGGTTTTGCTAGAATAAATAATAATGAGATTATTGTTTTAGTAAATGATGCGGAAAAGGATAGTGACATTGATCCACAAGACGCACAGCAAACTCTTGAAATAGCAAAAGCTAATTTGAATAAGGCGGAAGGCAAGAGACAAACAATTGAGGCAAATCTAGCTCTTAGACGAGCTAGGACACGAGTAGAGGCTATCAATGTTATTTCATAA
>Glyma02g31971.1 sequence type=predicted peptide gene model=Glyma02g31971 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MALMGGFARINNNEIIVLVNDAEKDSDIDPQDAQQTLEIAKANLNKAEGKRQTIEANLALRRARTRVEAINVIS*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||