Glyma02g31320 - SoyBase

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Report for Sequence Feature Glyma02g31320

Feature Type:	gene_model
Chromosome:	Gm02
Start:	34074028
stop:	34082008
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma02g31320

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G57650	AT	Annotation by Michelle Graham. TAIR10: lysophosphatidyl acyltransferase 2 \| chr3:21349751-21352839 FORWARD LENGTH=389	SoyBase	E_val: 0	ISS
GO:0006655	GO-bp	Annotation by Michelle Graham. GO Biological Process: phosphatidylglycerol biosynthetic process	SoyBase	N/A	ISS
GO:0008152	GO-bp	Annotation by Michelle Graham. GO Biological Process: metabolic process	SoyBase	N/A	ISS
GO:0005576	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: extracellular region	SoyBase	N/A	ISS
GO:0005783	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: endoplasmic reticulum	SoyBase	N/A	ISS
GO:0003841	GO-mf	Annotation by Michelle Graham. GO Molecular Function: 1-acylglycerol-3-phosphate O-acyltransferase activity	SoyBase	N/A	ISS
GO:0016746	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring acyl groups	SoyBase	N/A	ISS
KOG1505	KOG	Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases	JGI		ISS
PTHR10983	Panther	1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE	JGI		ISS
PTHR10983:SF1	Panther	ACYL-COA:1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE	JGI		ISS
PF01553	PFAM	Acyltransferase	JGI		ISS
UniRef100_I1JG72	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JG72_SOYBN	SoyBase	E_val: 0	ISS
UniRef100_Q2Z1Y8	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: 1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Prunus mume RepID=Q2Z1Y8_PRUMU	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma02g31320

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g31320 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.02g181300	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma02g31320

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma02g31320

Limit To All Plant Sequences

>Glyma02g31320.1   sequence type=CDS   gene model=Glyma02g31320   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGACTGCAGTTGTGGTCGTCCCATTGGGCCTTCTCTTCTTCGCTTCCGGCCTCATCGTTAACCTCATTCAGGCAATATGCTACGTGGTTGTGCGGCCGGTGTCAAAGAATTTGTACCGGCGGATGAACAGGGTGGTGGCTGAACTGCTGTGGCTGGAGCTCGTTTGGATTATTGATTGGTGGGCTGGTGTTAAGGTCCAAGTATTCACAGATCCTGAAACCTTTCATTCAATGGGTAAAGAGCATGCTCTTGTCATATCCAATCACAGAAGTGACATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGTTCAGGTTGCCTTGGCAGCACACTTGCTGTGATGAAGAAATCTTCAAAGTTTCTACCGGTCATTGGTTGGTCAATGTGGTTTTCTGAATATCTTTTCCTGGAGAGAAGTTGGGCCAAGGATGAACGCACATTAAAGTCAGGCCTACAGCAACTGAGGGATTTCCCTCTTCCCTTTTGGTTGGCTCTCTTTGTAGAAGGAACTCGCTTTACCCAGGCCAAACTATTAGCTGCTCAGGAGTATGCAGCCTCAGCTGGATTGCCTGTTCCAAGAAATGTTTTGATTCCAAGAACTAAGGGTTTTGTTTCAGCAGTAAACCATATGCGCTCGTTTGTTCCTGCCATTTATGATGTAACTGTGGCAATTCCCAAGAGTTCACCTGCTCCTACAATGCTAAGACTCTTCAGAGGGAAATCTTCATTGGTGCATGTGCATATTAAGCGGCATGCGATGAAGGATTTGCCAGAAGAAGATGAAGCTGTTGCTCAATGGTGTCGAGATGTGTTTGTGGCTAAGGATGCATTGTTAGACAAACATATAGCTGAGGACACATTTAGTGATCAAGAGCTGCAGGATACTGGTCGACCCGTAAAGTCTCTTGTGGTTGTCATATTGTGGGCTTGTGTCGTTGTTACGGGGGTCGTAAAGTTCCTCCAATGGTCTTCACTACTATCCTCCTGGAAGGGTGTTGCATTTTCAGCATTTGGTTTGGGAGTTGTCACTCTACTCATGCACATCTTGATCATGTTCTCACAATCTGAGCGTTCAACCCCTTCCAAGGTTGCCCCTACAAAAAAGTCCAAGAATAGCGAACAACTGGAAGCTAGGGATAACAAACAAGACTAG

Predicted protein sequences of Glyma02g31320

Limit To All Plant Sequences

>Glyma02g31320.1   sequence type=predicted peptide   gene model=Glyma02g31320   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MTAVVVVPLGLLFFASGLIVNLIQAICYVVVRPVSKNLYRRMNRVVAELLWLELVWIIDWWAGVKVQVFTDPETFHSMGKEHALVISNHRSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDERTLKSGLQQLRDFPLPFWLALFVEGTRFTQAKLLAAQEYAASAGLPVPRNVLIPRTKGFVSAVNHMRSFVPAIYDVTVAIPKSSPAPTMLRLFRGKSSLVHVHIKRHAMKDLPEEDEAVAQWCRDVFVAKDALLDKHIAEDTFSDQELQDTGRPVKSLVVVILWACVVVTGVVKFLQWSSLLSSWKGVAFSAFGLGVVTLLMHILIMFSQSERSTPSKVAPTKKSKNSEQLEARDNKQD*

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