Glyma02g29321 - SoyBase

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Report for Sequence Feature Glyma02g29321

Feature Type:	gene_model
Chromosome:	Gm02
Start:	30835508
stop:	30839056
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma02g29321

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
PF01081	PFAM	KDPG and KHG aldolase	JGI		ISS
UniRef100_A2Q5T0	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: KDPG and KHG aldolase n=1 Tax=Medicago truncatula RepID=A2Q5T0_MEDTR	SoyBase	E_val: 5.00E-71	ISS
UniRef100_UPI000233860E	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233860E related cluster n=1 Tax=unknown RepID=UPI000233860E	SoyBase	E_val: 1.00E-94	ISS

Expression Patterns of Glyma02g29321

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma02g29321 not represented in the dataset	Glyma02g29321 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g29321 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.02g173800	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma02g29321

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma02g29321

Limit To All Plant Sequences

>Glyma02g29321.1   sequence type=CDS   gene model=Glyma02g29321   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCCCTAGAGGTTGGAACTGTTCTCAAGATTGAGGATGCAAAAAGTGCAATTAATGTCAGAGCCAAATTTCTAATGAGTCCTGCAACTGTTAAGGATATAATGGAAATGGATTATGTTCAGAGTGGTGAAATTTTATATATTTCTGGCACAATGACTCCAACTGAAATATTGTCAGCATGTGATGAAGGTGCTAAAATTGTCAAGATTTATCCAGTTTCTGCACTCGGTGGATTTCAGTACATATCAACACTGAAGAAGGCCTTTCCTCATATCTTTATGGTTGCTTCTCAGGGAATAACAATAGATTCAATTGGGGAATACATTTTGCGAGGAGCATCAGCAGTTGTTTTGTCATATGCGATATTTGATAAAGATGCAATTGCACAACATGATTTAGATAAGATACAAAAACTTGCACATTCTGCTACCTTGGTGGATAACAAATCTGTGAATAGGTAA

Predicted protein sequences of Glyma02g29321

Limit To All Plant Sequences

>Glyma02g29321.1   sequence type=predicted peptide   gene model=Glyma02g29321   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MALEVGTVLKIEDAKSAINVRAKFLMSPATVKDIMEMDYVQSGEILYISGTMTPTEILSACDEGAKIVKIYPVSALGGFQYISTLKKAFPHIFMVASQGITIDSIGEYILRGASAVVLSYAIFDKDAIAQHDLDKIQKLAHSATLVDNKSVNR*

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