Report for Sequence Feature Glyma02g29150
Feature Type: gene_model
Chromosome: Gm02
Start: 30578882
stop: 30584243
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma02g29150
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G42080 AT
Annotation by Michelle Graham. TAIR10: Chaperone DnaJ-domain superfamily protein | chr2:17553409-17555475 REVERSE LENGTH=263
SoyBase E_val: 2.00E-67 ISS
GO:0006457 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein folding
SoyBase N/A ISS
GO:0031072 GO-mf
Annotation by Michelle Graham. GO Molecular Function: heat shock protein binding
SoyBase N/A ISS
PTHR25040 Panther
FAMILY NOT NAMED
JGI ISS
PTHR25040:SF104 Panther
JGI ISS
PF00226 PFAM
DnaJ domain
JGI ISS
UniRef100_B9SXJ3 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Heat shock protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SXJ3_RICCO
SoyBase E_val: 5.00E-92 ISS
UniRef100_I1JG10 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JG10_SOYBN
SoyBase E_val: 3.00E-179 ISS
Expression Patterns of Glyma02g29150
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma02g29150
Paralog Evidence Comments
Glyma09g17020 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma02g29150 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.02g172700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma02g29150
Coding sequences of Glyma02g29150
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma02g29150.1 sequence type=CDS gene model=Glyma02g29150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAACAAGGCCATCTTCACCAGATTCTTTCACTCCACTCCTCTCTTGGAACGCAAATCCCGCACTTTTGGGGAATCTAGATGCAACAATTACTCCAAAAGATTCCGAAAACTCCGTGCCAAACAAACGCTGCTTCACGATGTCAATGCCTACGCACAATTCATGTGTCAGAGCTGGAAAGAAGATGTTGATGAGGATGGTCCATCTCCCAGTCTAGGCCCCTCATGGTTCAGAAAACAATATTCTCCTAAAGGCTCTGGAAGGCACAGGAATGACAATCAAAGATCAAAGCATCAATTTAGAAGAAATCATGAATTTTGCAAAGATGATTTTGACGTTGAAACCGTTTTCCGCTCTGCCTTTGGTGGCAATCGATCTTTTTATTGGTCCTTTATAAATGAGGAAAATCCTCAGTGGAGGAAGTCAGGAGGCTTTTCTAATCATGGGAAATCTTGGAATTGGAGACGTTGGAGTGAAAATGGATATAATGGCACATCAACCGAGTCAGATTGTTCGCAATCAGATTTAATTTCAGATAGATTAGCCCTTGGAATGAGTGCTTCTGGCCCTTTGAAACTTGAAGATGTGAAAAATGCGTACCGGATATGTGCCTTAAAGTGGCATCCAGATCGTCATGATGGCTCTTTTAAGGTTATAGCAGAGGAAAAGTTCAAGCATTGCAGTGCTGCTTATCAATCCTTGTGTGATAAGCTGGCCTTGGATTAG
Predicted protein sequences of Glyma02g29150
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma02g29150.1 sequence type=predicted peptide gene model=Glyma02g29150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MNKAIFTRFFHSTPLLERKSRTFGESRCNNYSKRFRKLRAKQTLLHDVNAYAQFMCQSWKEDVDEDGPSPSLGPSWFRKQYSPKGSGRHRNDNQRSKHQFRRNHEFCKDDFDVETVFRSAFGGNRSFYWSFINEENPQWRKSGGFSNHGKSWNWRRWSENGYNGTSTESDCSQSDLISDRLALGMSASGPLKLEDVKNAYRICALKWHPDRHDGSFKVIAEEKFKHCSAAYQSLCDKLALD*