SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
|
A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G70260 | AT | Annotation by Michelle Graham. TAIR10: nodulin MtN21 /EamA-like transporter family protein | chr1:26457067-26459338 REVERSE LENGTH=375 | SoyBase | E_val: 5.00E-23 | ISS |
| GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
| GO:0003674 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: molecular function | SoyBase | N/A | ISS |
| UniRef100_I1JFZ3 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JFZ3_SOYBN | SoyBase | E_val: 9.00E-40 | ISS |
| UniRef100_O04519 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: F20P5.1 protein n=1 Tax=Arabidopsis thaliana RepID=O04519_ARATH | SoyBase | E_val: 8.00E-22 | ISS |
|
Glyma02g28560 not represented in the dataset |
Glyma02g28560 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma02g28560.2 sequence type=CDS gene model=Glyma02g28560 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGAGGTTAAGACTAAGATGTCGGAAGTGCTACCATTCATATTGATGGTGATTATGGAAGGTTGGACCATAGGACTCACAATCTTTGCAAAAACTGGAATAACTAAGGGAATGAGTCCATTTGTGTTCATTGTTTATACCAATGCTCTGGCCACTATAATATTGTTCCCTTGTTCCTTTTTATCACACCAAGAGGATAGGTCTCTCTCTTCCTCTTTTGCTTCTCCTTATGATTCTAGCTAG
>Glyma02g28560.2 sequence type=predicted peptide gene model=Glyma02g28560 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MEVKTKMSEVLPFILMVIMEGWTIGLTIFAKTGITKGMSPFVFIVYTNALATIILFPCSFLSHQEDRSLSSSFASPYDSS*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
|
|
|
