Glyma02g28318 - SoyBase

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Report for Sequence Feature Glyma02g28318

Feature Type:	gene_model
Chromosome:	Gm02
Start:	29589058
stop:	29590435
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma02g28318

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_B9SYV7	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9SYV7_RICCO	SoyBase	E_val: 9.00E-11	ISS
UniRef100_UPI000233C1AB	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233C1AB related cluster n=1 Tax=unknown RepID=UPI000233C1AB	SoyBase	E_val: 5.00E-28	ISS

Expression Patterns of Glyma02g28318

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma02g28318 not represented in the dataset	Glyma02g28318 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g28318 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.U022500	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma02g28318

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma02g28318

Limit To All Plant Sequences

>Glyma02g28318.1   sequence type=CDS   gene model=Glyma02g28318   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCCTTATCCAACATGGAACAACAACAACAACACCACGCGCTTCTACGGAACAACAACGACTTCGTTTTCTCACCACCACCACCACCAACACCAACAACCTATTAACGGAAGCCCCTTAGCGTTTTGGAGAATCCCTAATGGCTCCACCAATAATAACAACCCTAGTTTCAGCCACGAGCATTCGTCGTTGCCGCCTTTGTTCGCGACCGAGGAAATAGCGAACGTGAGAACCTCGCAGGTTGTCGGAGCCTCGGGGCCAACGCAAAATCGCTACGTGTATGACTCGAAACGCGACCGTACTGGGGAAACTGTTTCACACGTGTGGGATTATGGAAAGGGTAAGAGACAGTTGTGTGCGCATGAACAATTTGTCGAGACACACGTGTGCCGAAATCCATCATATTGTCCAGGCAGGTGGGGTGATGAGAGAGGTGGGTTTCTGATTCAATGCAATTGTAATTGTGAAAGGTCATGA

Predicted protein sequences of Glyma02g28318

Limit To All Plant Sequences

>Glyma02g28318.1   sequence type=predicted peptide   gene model=Glyma02g28318   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MPYPTWNNNNNTTRFYGTTTTSFSHHHHHQHQQPINGSPLAFWRIPNGSTNNNNPSFSHEHSSLPPLFATEEIANVRTSQVVGASGPTQNRYVYDSKRDRTGETVSHVWDYGKGKRQLCAHEQFVETHVCRNPSYCPGRWGDERGGFLIQCNCNCERS*

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