Report for Sequence Feature Glyma02g27000
Feature Type: gene_model
Chromosome: Gm02
Start: 28167796
stop: 28169238
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma02g27000
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G39200 AT
Annotation by Michelle Graham. TAIR10: Seven transmembrane MLO family protein | chr2:16356255-16359797 REVERSE LENGTH=576
SoyBase E_val: 5.00E-19 ISS
GO:0002679 GO-bp
Annotation by Michelle Graham. GO Biological Process: respiratory burst involved in defense response
SoyBase N/A ISS
GO:0006857 GO-bp
Annotation by Michelle Graham. GO Biological Process: oligopeptide transport
SoyBase N/A ISS
GO:0006865 GO-bp
Annotation by Michelle Graham. GO Biological Process: amino acid transport
SoyBase N/A ISS
GO:0006952 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response
SoyBase N/A ISS
GO:0008219 GO-bp
Annotation by Michelle Graham. GO Biological Process: cell death
SoyBase N/A ISS
GO:0009407 GO-bp
Annotation by Michelle Graham. GO Biological Process: toxin catabolic process
SoyBase N/A ISS
GO:0009817 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response to fungus, incompatible interaction
SoyBase N/A ISS
GO:0010150 GO-bp
Annotation by Michelle Graham. GO Biological Process: leaf senescence
SoyBase N/A ISS
GO:0010200 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to chitin
SoyBase N/A ISS
GO:0010583 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to cyclopentenone
SoyBase N/A ISS
GO:0015824 GO-bp
Annotation by Michelle Graham. GO Biological Process: proline transport
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0016021 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane
SoyBase N/A ISS
GO:0005516 GO-mf
Annotation by Michelle Graham. GO Molecular Function: calmodulin binding
SoyBase N/A ISS
PF03094 PFAM
Mlo family
JGI ISS
UniRef100_I1MNL9 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: MLO-like protein n=1 Tax=Glycine max RepID=I1MNL9_SOYBN
SoyBase E_val: 1.00E-20 ISS
UniRef100_UPI00023373A3 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI00023373A3 related cluster n=1 Tax=unknown RepID=UPI00023373A3
SoyBase E_val: 5.00E-40 ISS
Expression Patterns of Glyma02g27000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma02g27000 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
References for Glyma02g27000
Coding sequences of Glyma02g27000
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma02g27000.1 sequence type=CDS gene model=Glyma02g27000 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGTGGCATCTCCAATCTTCTTTCTTCCTTCTCTATTTCCTTGCCATTAATCTTCAAGAAGCAAAGGACTTCATTGATGAAGAAGATCCAAGGCCTACAAGCTCAACATGGAGCTACATCACTACTCATTCTGCAATCTTATTAGTGGGTGTCAAGCTACAAAGGATCATAACAAAGATGGGACTAAGGATTGAAGACAAAGGGGAAGTATTCAAGGATGCACTAGTGGTGGAGCCAGGAGATGACTTGTTCTGGTTCAACTGTCCACGCCTCCTTCTCTTTGTCATTCATCTTGTTTTCTTTCTTGGCACTAAAATTGGAATTTATGGATCTAATTGCCCAGAATGGATTATGGCAATGGAGATGCATGCCAAAGATATGATCCTAACCAAAGCCAATCTTCGGTCTTTGTTTATTTTACATCTCTTAGTAAACAGATATGAGGAAGAGAAAGCTAAAGCCACCGCAATTGGAATTAAGCCATATTCGTGGCATGACTTCTTGCACTTGGTT
Predicted protein sequences of Glyma02g27000
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma02g27000.1 sequence type=predicted peptide gene model=Glyma02g27000 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVWHLQSSFFLLYFLAINLQEAKDFIDEEDPRPTSSTWSYITTHSAILLVGVKLQRIITKMGLRIEDKGEVFKDALVVEPGDDLFWFNCPRLLLFVIHLVFFLGTKIGIYGSNCPEWIMAMEMHAKDMILTKANLRSLFILHLLVNRYEEEKAKATAIGIKPYSWHDFLHLV