|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT4G04040 | AT | Annotation by Michelle Graham. TAIR10: Phosphofructokinase family protein | chr4:1939250-1942765 FORWARD LENGTH=569 | SoyBase | E_val: 3.00E-59 | ISS |
GO:0006096 | GO-bp | Annotation by Michelle Graham. GO Biological Process: glycolysis | SoyBase | N/A | ISS |
GO:0009793 | GO-bp | Annotation by Michelle Graham. GO Biological Process: embryo development ending in seed dormancy | SoyBase | N/A | ISS |
GO:0015979 | GO-bp | Annotation by Michelle Graham. GO Biological Process: photosynthesis | SoyBase | N/A | ISS |
GO:0016036 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cellular response to phosphate starvation | SoyBase | N/A | ISS |
GO:0019375 | GO-bp | Annotation by Michelle Graham. GO Biological Process: galactolipid biosynthetic process | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0005829 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosol | SoyBase | N/A | ISS |
GO:0005945 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: 6-phosphofructokinase complex | SoyBase | N/A | ISS |
GO:0010318 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex | SoyBase | N/A | ISS |
GO:0003872 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: 6-phosphofructokinase activity | SoyBase | N/A | ISS |
GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
GO:0047334 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: diphosphate-fructose-6-phosphate 1-phosphotransferase activity | SoyBase | N/A | ISS |
PTHR13697 | Panther | PHOSPHOFRUCTOKINASE | JGI | ISS | |
UniRef100_G7JKF2 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Pyrophosphate-fructose 6-phosphate 1-phosphotransferase subunit beta n=1 Tax=Medicago truncatula RepID=G7JKF2_MEDTR | SoyBase | E_val: 7.00E-69 | ISS |
UniRef100_I1KNH5 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KNH5_SOYBN | SoyBase | E_val: 7.00E-95 | ISS |
Glyma02g26530 not represented in the dataset |
Glyma02g26530 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.02g170100 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma02g26530.1 sequence type=CDS gene model=Glyma02g26530 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGACCGAAGGAGATTTTGCAATCAACGGTGGTTTCCCCGGCGCCAGAGTCACTCCTCCTTCCGTCACCGGTCGCTTCGCCGCCGTCTACAGCGAGGTCCAAAACAGTTGCATTGACCACGAACTCCCTCTCCCCTCCGTTCTCAAAAGCCCTTTCATCATTGTCGATAGTCCCCAAAGCTCTGCCGCCGGCAACCCTGAGGAGATCGCGAAGCCGTTCCCGAAACTGTTCGGGCAACCGTCCGCGGCTTTGGTGTCAAGTGATTCCCATGCGCCGCATGCAAATCGAAAGCTGAAGATTGGCGTGGTTCTGTCCGGTGTCCAGCCTCCCGACGGTCACAATGTTATTTTTGGAATCTTCGATTACCTACAAGACCTTGCAGAAGGAAGCACATTGTATGGTTTCAGGGGTGGTCCAGCTGGCATCATGAAGTGCAAATACATTGAACTTACCTCAGATTATATTTATCCTTCCAGAAATCAGACTATTGTGGCTAGGGAAACCCATTTCATCCCATTTCATCTTGTTATTAATACCATAGTTAGAACTTAG
>Glyma02g26530.1 sequence type=predicted peptide gene model=Glyma02g26530 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MTEGDFAINGGFPGARVTPPSVTGRFAAVYSEVQNSCIDHELPLPSVLKSPFIIVDSPQSSAAGNPEEIAKPFPKLFGQPSAALVSSDSHAPHANRKLKIGVVLSGVQPPDGHNVIFGIFDYLQDLAEGSTLYGFRGGPAGIMKCKYIELTSDYIYPSRNQTIVARETHFIPFHLVINTIVRT*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||