Glyma02g26510 - SoyBase

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Report for Sequence Feature Glyma02g26510

Feature Type:	gene_model
Chromosome:	Gm02
Start:	27403751
stop:	27409592
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma02g26510

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G41945	AT	Annotation by Michelle Graham. TAIR10: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). \| chr2:17511071-17512898 REVERSE LENGTH=158	SoyBase	E_val: 1.00E-72	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0016020	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: membrane	SoyBase	N/A	ISS
GO:0003674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: molecular function	SoyBase	N/A	ISS
UniRef100_B6T210	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Gb protein n=1 Tax=Zea mays RepID=B6T210_MAIZE	SoyBase	E_val: 3.00E-66	ISS
UniRef100_I1JFU2	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JFU2_SOYBN	SoyBase	E_val: 5.00E-119	ISS

Expression Patterns of Glyma02g26510

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma02g26510

Paralog	Evidence	Comments
Glyma09g16051	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma02g26510 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.02g170300	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma02g26510

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma02g26510

Limit To All Plant Sequences

>Glyma02g26510.2   sequence type=transcript   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CGAAAAAAACGTGAGGATTCGTTCTCAAGTCTCATCTAATCTATACCCCGTCTAAATCTCCGAGTGGTTGACACCGATCGAAGTAGTAGCACACAGAAAATGGGCACTCGAGAGGTGTACGAAGAGAAACTAAGGACCGGAAATCTCCACCACGATCCCACCATCAACCCTGGCCTCGGTTCCGCTCGATGCCCTCGCTGTCTCTCTCTCCTCAACCCTAATTTCGAAAGAGGCGAGTGGACCATCACTCCCGTCTTGCACGACGCCACTGCCGTCGCTGGGTCGGGGATTGGTGGTATGCTTGGTTTTGTTCATGGTTTCAATACAGGTTTACCTCTTCTTCAAAATGGTCTGAAGGGACCGAAGTGGCTTCCTTTTGTTGTTGGGATTCCTCCATTGTTGATATTCTCCGGCCTAAGTGCAGCATTTGGAGGTTATGTGCTTCCAAAGTTCACTCAACTTACCGTAACATCCTACTATGCCTCCTCGAGTGCCTCACATTATGGAATCTCGCTTCTCACCCGACATATTGAAGAGAATTACAGTTCCAAAACTCGGCAGCACCTCAAGAGGCTCTGATAATTCCTTTCGGGTGTACTGACAAGGAAAATACATTACCTTCTGGCAATTTTGTTTACATTACCTTCCTGTGGATGGTTTGGAGTGTTAAAATTTCATTTATAATATTGTTACTCCATACGGAAATGCTTATAATGTGAATAATGCCTATTTATATTTTACTATTAAGCTGTGATAAGCTCATTTATTGAAGTGTAATGTGTAGTGTTTTAGGGGAAGCGACTAAGAAAGAAAACTAGCAAAAATTCAAGTCAATCTTATTTTTATGGCAATTTTATTCGTAAGATTTATTTACATAGCATCAAATCTAGTCGTATGCAGCTGTTGAAGGGGCATTTGGTTGTCAGTTGTTGAAGGGGCATTTGGTTGTTCTACTGCTGAATGAATTGGTATGTGGGAAGGGAAAATTATA

>Glyma02g26510.3   sequence type=transcript   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CGAAAAAAACGTGAGGATTCGTTCTCAAGTCTCATCTAATCTATACCCCGTCTAAATCTCCGAGTGGTTGACACCGATCGAAGTAGTAGCACACAGAAAATGGGCACTCGAGAGGTGTACGAAGAGAAACTAAGGACCGGAAATCTCCACCACGATCCCACCATCAACCCTGGCCTCGGTTCCGCTCGATGCCCTCGCTGTCTCTCTCTCCTCAACCCTAATTTCGTCTGTCTCTCTCTCCTCAACCCTAATTTCGAAAGAGGCGAGTGGACCATCACTCCCGTCTTGCACGACGCCACTGCCGTCGCTGGGTCGGGGATTGGTGGTATGCTTGGTTTTGTTCATGGTTTCAATACAGGTTTACCTCTTCTTCAAAATGGTCTGAAGGGACCGAAGTGGCTTCCTTTTGTTGTTGGGATTCCTCCATTGTTGATATTCTCCGGCCTAAGTGCAGCATTTGGAGATACATGTGAAACTTTTAGGTTATGTGCTTCCAAAGTTCACTCAACTTACCGTAACATCCTACTATGCCTCCTCGAGTGCCTCACATTATGGAATCTCGCTTCTCACCCGACATATTGAAGAGAATTACAGTTCCAAAACTCGGCAGCACCTCAAGAGGCTCTGATAATTCCTTTCGGGTGTACTGACAAGGAAAATACATTACCTTCTGGCAATTTTGTTTACATTACCTTCCTGTGGATGGTTTGGAGTGTTAAAATTTCATTTATAATATTGTTACTCCATACGGAAATGCTTATAATGTGAATAATGCCTATTTATATTTTACTATTAAGCTGTGATAAGCTCATTTATTGAAGTGTAATGTGTAGTGTTTTAGGGGAAGCGACTAAGAAAGAAAACTAGCAAAAATTCAAGTCAATCTTATTTTTATGGCAATTTTATTCGTAAGATTTATTTACATAGCATCAAATCTAGTCGTATGCAGCTGTTGAAGGGGCATTTGGTTGTCAGTTGTTGAAGGGGCATTTGGTTGTTCTACTGCTGAATGAATTGGTATGTGGGAAGGGAAAATTATA

>Glyma02g26510.4   sequence type=transcript   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CGAAAAAAACGTGAGGATTCGTTCTCAAGTCTCATCTAATCTATACCCCGTCTAAATCTCCGAGTGGTTGACACCGATCGAAGTAGTAGCACACAGAAAATGGGCACTCGAGAGGTGTACGAAGAGAAACTAAGGACCGGAAATCTCCACCACGATCCCACCATCAACCCTGGCCTCGGTTCCGCTCGATGCCCTCGCTGTCTCTCTCTCCTCAACCCTAATTTCGTCTGTCTCTCTCTCCTCAACCCTAATTTCGAAAGAGGCGAGTGGACCATCACTCCCGTCTTGCACGACGCCACTGCCGTCGCTGGGTCGGGGATTGGTGGTATGCTTGGTTTTGTTCATGGTTTCAATACAGGTTTACCTCTTCTTCAAAATGGTCTGAAGGGACCGAAGTGGCTTCCTTTTGTTGTTGGGATTCCTCCATTGTTGATATTCTCCGGCCTAAGTGCAGCATTTGGAGGTAACTTCTGTTCTAGCCTATTTCTTAGATTTATATTAGGGCCTTCAAATTTTAATAGTGCTCACTGCTGAATATTTGAAAACTATTGTGTTGTAGTGGCTTTAACATAAAAAGAAGCATGAAATGATAGGTCATGCTCCATTTGTTTCTGGCTTTGTTTTTTGGTTACTTGAATCAATGTTGTAAATCTCAAGATACTACTACCTAGGGTAAGAAGGATGGGTAAGAGACAAGTATGTGTGCTAGTAACATGGATCTTAAGTAAGAGCCCAACATGCAAAATTATAAAATGACTGAAATAGGCAAAATAACTTAAAATTACTACTAACATGTTGTCTAACTTCAATAGTTCAATTGAAAATGCATGGAAAAGTCAGAACTTAACTCAAGTTAAAGGTGTAACTTATGATATAAAAGGCATTAGTTTTAGTACCAAA

>Glyma02g26510.5   sequence type=transcript   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATCTAATCTATACCCCGTCTAAATCTCCGAGTGGTTGACACCGATCGAAGTAGTAGCACACAGAAAATGGGCACTCGAGAGGTGTACGAAGAGAAACTAAGGACCGGAAATCTCCACCACGATCCCACCATCAACCCTGGCCTCGGTTCCGCTCGATGCCCTCGCTGTCTCTCTCTCCTCAACCCTAATTTCGTCTGTCTCTCTCTCCTCAACCCTAATTTCGAAAGAGGCGAGTGGACCATCACTCCCGTCTTGCACGACGCCACTGCCGTCGTAAGTTCCTCTCTTCCTAATTCGCTTCGGTTTGAGTTTTTTTTCTCTCTTTTTTTGTGTGAACCAAGGTATCCTCGGCCGAAATGCAAGGACTAATGGAATTGAGCTCTTCCAACTGATACTTTTTCATGCGCATGACTTAGGGATGGAATCCATGATAACAATAATATTAATATTAATATTTTAATAAAATTAAGATTAATGAAAAAATTTGAGTTTATTTTTTTTACTTCAAAGATGAGACTAACCATTTTTGAGCTTAAATTCTGACAATATGCTTATTGTATGAGTGGTGTTGTTGTTGCTTATTTTCTGTGTTTGCTGTTGAATAGGCT

>Glyma02g26510.6   sequence type=transcript   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GTCTAAATCTCCGAGTGGTTGACACCGATCGAAGTAGTAGCACACAGAAAATGGGCACTCGAGAGGTGTACGAAGAGAAACTAAGGACCGGAAATCTCCACCACGATCCCACCATCAACCCTGGCCTCGGTTCCGCTCGATGCCCTCGCTGTCTCTCTCTCCTCAACCCTAATTTCGAAAGAGGCGAGTGGACCATCACTCCCGTCTTGCACGACGCCACTGCCGTCGCTGGGTCGGGGATTGGTGGTATGCTTGGTTTTGTTCATGGTTTCAATACAGGTAACGTTATTTTCTTGTGTTTATCTTTATGATGTATCATATGAGATGAAGTTTGATATGAAGTTGGTGTCTATTTTATTTTCAGCATTAAATTCAGGTCATTTTGTTGTGATAAATATTTTTAAGATTTTCTTTTTACTTACTTTGGCATTATAATATTTTTAATAGGTATTATAACGTCTCTAAAACATAGGTTTTTAATTGAGCTGAATGACATCGTCTAATCCATGTAATCACCTCACCTAGCTGGATAAGGCTTTGTTGTTATTGTATTATAGTATTTAATTATTTATTGATGGTGTTAAAC

Coding sequences of Glyma02g26510

Limit To All Plant Sequences

>Glyma02g26510.1   sequence type=CDS   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGCACTCGAGAGGTGTACGAAGAGAAACTAAGGACCGGAAATCTCCACCACGATCCCACCATCAACCCTGGCCTCGGTTCCGCTCGATGCCCTCGCTGTCTCTCTCTCCTCAACCCTAATTTCGTCTGTCTCTCTCTCCTCAACCCTAATTTCGAAAGAGGCGAGTGGACCATCACTCCCGTCTTGCACGACGCCACTGCCGTCGCTGGGTCGGGGATTGGTGGTATGCTTGGTTTTGTTCATGGTTTCAATACAGGTTTACCTCTTCTTCAAAATGGTCTGAAGGGACCGAAGTGGCTTCCTTTTGTTGTTGGGATTCCTCCATTGTTGATATTCTCCGGCCTAAGTGCAGCATTTGGAGGTTATGTGCTTCCAAAGTTCACTCAACTTACCGTAACATCCTACTATGCCTCCTCGAGTGCCTCACATTATGGAATCTCGCTTCTCACCCGACATATTGAAGAGAATTACAGTTCCAAAACTCGGCAGCACCTCAAGAGGCTCTGA

>Glyma02g26510.2   sequence type=CDS   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGCACTCGAGAGGTGTACGAAGAGAAACTAAGGACCGGAAATCTCCACCACGATCCCACCATCAACCCTGGCCTCGGTTCCGCTCGATGCCCTCGCTGTCTCTCTCTCCTCAACCCTAATTTCGAAAGAGGCGAGTGGACCATCACTCCCGTCTTGCACGACGCCACTGCCGTCGCTGGGTCGGGGATTGGTGGTATGCTTGGTTTTGTTCATGGTTTCAATACAGGTTTACCTCTTCTTCAAAATGGTCTGAAGGGACCGAAGTGGCTTCCTTTTGTTGTTGGGATTCCTCCATTGTTGATATTCTCCGGCCTAAGTGCAGCATTTGGAGGTTATGTGCTTCCAAAGTTCACTCAACTTACCGTAACATCCTACTATGCCTCCTCGAGTGCCTCACATTATGGAATCTCGCTTCTCACCCGACATATTGAAGAGAATTACAGTTCCAAAACTCGGCAGCACCTCAAGAGGCTCTGA

>Glyma02g26510.3   sequence type=CDS   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGCACTCGAGAGGTGTACGAAGAGAAACTAAGGACCGGAAATCTCCACCACGATCCCACCATCAACCCTGGCCTCGGTTCCGCTCGATGCCCTCGCTGTCTCTCTCTCCTCAACCCTAATTTCGTCTGTCTCTCTCTCCTCAACCCTAATTTCGAAAGAGGCGAGTGGACCATCACTCCCGTCTTGCACGACGCCACTGCCGTCGCTGGGTCGGGGATTGGTGGTATGCTTGGTTTTGTTCATGGTTTCAATACAGGTTTACCTCTTCTTCAAAATGGTCTGAAGGGACCGAAGTGGCTTCCTTTTGTTGTTGGGATTCCTCCATTGTTGATATTCTCCGGCCTAAGTGCAGCATTTGGAGATACATGTGAAACTTTTAGGTTATGTGCTTCCAAAGTTCACTCAACTTACCGTAACATCCTACTATGCCTCCTCGAGTGCCTCACATTATGGAATCTCGCTTCTCACCCGACATATTGA

>Glyma02g26510.4   sequence type=CDS   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGCACTCGAGAGGTGTACGAAGAGAAACTAAGGACCGGAAATCTCCACCACGATCCCACCATCAACCCTGGCCTCGGTTCCGCTCGATGCCCTCGCTGTCTCTCTCTCCTCAACCCTAATTTCGTCTGTCTCTCTCTCCTCAACCCTAATTTCGAAAGAGGCGAGTGGACCATCACTCCCGTCTTGCACGACGCCACTGCCGTCGCTGGGTCGGGGATTGGTGGTATGCTTGGTTTTGTTCATGGTTTCAATACAGGTTTACCTCTTCTTCAAAATGGTCTGAAGGGACCGAAGTGGCTTCCTTTTGTTGTTGGGATTCCTCCATTGTTGATATTCTCCGGCCTAAGTGCAGCATTTGGAGGTAACTTCTGTTCTAGCCTATTTCTTAGATTTATATTAGGGCCTTCAAATTTTAATAGTGCTCACTGCTGA

>Glyma02g26510.5   sequence type=CDS   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGCACTCGAGAGGTGTACGAAGAGAAACTAAGGACCGGAAATCTCCACCACGATCCCACCATCAACCCTGGCCTCGGTTCCGCTCGATGCCCTCGCTGTCTCTCTCTCCTCAACCCTAATTTCGTCTGTCTCTCTCTCCTCAACCCTAATTTCGAAAGAGGCGAGTGGACCATCACTCCCGTCTTGCACGACGCCACTGCCGTCGTAAGTTCCTCTCTTCCTAATTCGCTTCGGTTTGAGTTTTTTTTCTCTCTTTTTTTGTGTGAACCAAGGTATCCTCGGCCGAAATGCAAGGACTAA

>Glyma02g26510.6   sequence type=CDS   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGCACTCGAGAGGTGTACGAAGAGAAACTAAGGACCGGAAATCTCCACCACGATCCCACCATCAACCCTGGCCTCGGTTCCGCTCGATGCCCTCGCTGTCTCTCTCTCCTCAACCCTAATTTCGAAAGAGGCGAGTGGACCATCACTCCCGTCTTGCACGACGCCACTGCCGTCGCTGGGTCGGGGATTGGTGGTATGCTTGGTTTTGTTCATGGTTTCAATACAGGTAACGTTATTTTCTTGTGTTTATCTTTATGA

Predicted protein sequences of Glyma02g26510

Limit To All Plant Sequences

>Glyma02g26510.1   sequence type=predicted peptide   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGTREVYEEKLRTGNLHHDPTINPGLGSARCPRCLSLLNPNFVCLSLLNPNFERGEWTITPVLHDATAVAGSGIGGMLGFVHGFNTGLPLLQNGLKGPKWLPFVVGIPPLLIFSGLSAAFGGYVLPKFTQLTVTSYYASSSASHYGISLLTRHIEENYSSKTRQHLKRL*

>Glyma02g26510.2   sequence type=predicted peptide   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGTREVYEEKLRTGNLHHDPTINPGLGSARCPRCLSLLNPNFERGEWTITPVLHDATAVAGSGIGGMLGFVHGFNTGLPLLQNGLKGPKWLPFVVGIPPLLIFSGLSAAFGGYVLPKFTQLTVTSYYASSSASHYGISLLTRHIEENYSSKTRQHLKRL*

>Glyma02g26510.3   sequence type=predicted peptide   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGTREVYEEKLRTGNLHHDPTINPGLGSARCPRCLSLLNPNFVCLSLLNPNFERGEWTITPVLHDATAVAGSGIGGMLGFVHGFNTGLPLLQNGLKGPKWLPFVVGIPPLLIFSGLSAAFGDTCETFRLCASKVHSTYRNILLCLLECLTLWNLASHPTY*

>Glyma02g26510.4   sequence type=predicted peptide   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGTREVYEEKLRTGNLHHDPTINPGLGSARCPRCLSLLNPNFVCLSLLNPNFERGEWTITPVLHDATAVAGSGIGGMLGFVHGFNTGLPLLQNGLKGPKWLPFVVGIPPLLIFSGLSAAFGGNFCSSLFLRFILGPSNFNSAHC*

>Glyma02g26510.5   sequence type=predicted peptide   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGTREVYEEKLRTGNLHHDPTINPGLGSARCPRCLSLLNPNFVCLSLLNPNFERGEWTITPVLHDATAVVSSSLPNSLRFEFFFSLFLCEPRYPRPKCKD*

>Glyma02g26510.6   sequence type=predicted peptide   gene model=Glyma02g26510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGTREVYEEKLRTGNLHHDPTINPGLGSARCPRCLSLLNPNFERGEWTITPVLHDATAVAGSGIGGMLGFVHGFNTGNVIFLCLSL*

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