|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G33680 | AT | Annotation by Michelle Graham. TAIR10: Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:14249608-14251791 FORWARD LENGTH=727 | SoyBase | E_val: 2.00E-23 | ISS |
GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
GO:0005575 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cellular component | SoyBase | N/A | ISS |
PTHR24015 | Panther | FAMILY NOT NAMED | JGI | ISS | |
PTHR24015:SF124 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
PF01535 | PFAM | PPR repeat | JGI | ISS | |
UniRef100_B9RBA6 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RBA6_RICCO | SoyBase | E_val: 1.00E-58 | ISS |
UniRef100_I1MJM8 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=2 Tax=Glycine max RepID=I1MJM8_SOYBN | SoyBase | E_val: 2.00E-96 | ISS |
Glyma02g24715 not represented in the dataset |
Glyma02g24715 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.02g164800 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma02g24715.1 sequence type=CDS gene model=Glyma02g24715 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGATGCTCACTCAGATTTGTTTGCTGCTATTGGACTTGTAGATATGCATTCTAAGTGTGAAATGATGGATGATGCGAGAAGAGCTTATGATTCGATGTATGCAGTCTCACTTTTTTCTAATATGTTTAGTAAAGATATAGATTTCAACCAAACTACTTTGTCAAGGGTTCTCAAATCTGTGGCTAGCTTGCAGGCAATTAAGGTGTGTAAGCAGATTCATATAATTTCCATCAAAGTTGGAATTTATTCAGATTTCTATGTAATATACAGTCTTGTTGACAAGTTTGGAAAATGTAACCATATAGATGAAGCTTCGAAAACATTTGAAGATTGCACTTGGGAAGATTTGGTGGCTTACACATCCATGATAAGAACATATTCTCAATATGGGGATGGGGAGGAGGCTTTAAAGCTATATTTAGAAATGCAAGATGCAGATATCAATCCCGATCCATTTATCTGCAGTTCCCTTTTAAATGCTTGTGCAAATTTGTCTACCTATGAGCAAGGGAAACAATTACATATCAAAGACAAGGTATATACACTTTCTTTGGGTGACCTTCTAAGTAAAGCTGGATATAGTTCCATTGTGGACATCGAAATACACAATGTGGACAAAAGTGAAAAGGAGAAGCTCTTATATCTACGAATTTGTGTTGATTGCCACACCTTTTTCAAATTCGTATGTGAAATTGTTTCAAGGGAAATTATTGTCAGAGATATTAATAGATTCCATCATTTTAAGGCCATACTAACTTAG
>Glyma02g24715.1 sequence type=predicted peptide gene model=Glyma02g24715 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MDAHSDLFAAIGLVDMHSKCEMMDDARRAYDSMYAVSLFSNMFSKDIDFNQTTLSRVLKSVASLQAIKVCKQIHIISIKVGIYSDFYVIYSLVDKFGKCNHIDEASKTFEDCTWEDLVAYTSMIRTYSQYGDGEEALKLYLEMQDADINPDPFICSSLLNACANLSTYEQGKQLHIKDKVYTLSLGDLLSKAGYSSIVDIEIHNVDKSEKEKLLYLRICVDCHTFFKFVCEIVSREIIVRDINRFHHFKAILT*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||