Report for Sequence Feature Glyma02g17470
Feature Type: gene_model
Chromosome: Gm02
Start: 15722317
stop: 15724906
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma02g17470
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G47710 AT
Annotation by Michelle Graham. TAIR10: Adenine nucleotide alpha hydrolases-like superfamily protein | chr2:19555045-19555956 REVERSE LENGTH=162
SoyBase E_val: 1.00E-71 ISS
GO:0002238 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to molecule of fungal origin
SoyBase N/A ISS
GO:0005773 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: vacuole
SoyBase N/A ISS
GO:0005794 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
PF00582 PFAM
Universal stress protein family
JGI ISS
UniRef100_B4UW73 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Universal stress protein n=1 Tax=Arachis hypogaea RepID=B4UW73_ARAHY
SoyBase E_val: 2.00E-83 ISS
UniRef100_C6TGN9 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=C6TGN9_SOYBN
SoyBase E_val: 2.00E-112 ISS
Expression Patterns of Glyma02g17470
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma02g17470
Paralog Evidence Comments
Glyma10g02340 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma02g17470 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.02g155600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma02g17470
Transcripts of Glyma02g17470
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma02g17470.3 sequence type=transcript gene model=Glyma02g17470 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GGCTCATTCGAGATTTGAATGAAAGTATCGTACGCTACATACCAATAAAGGGGAAAAAAAAAAGTATCTAACTCTACAATTATTTTAAACAAATTTAGTTTTAATCTTATCTTAGGGAGCATATTCAGCGTGCTTCAACTTGATTATCATTCGAGTGGTTTTGTATATATTGGCTAAGAAAACAAAATTAAAAATAAGTTATTATATTTTAAAATAATTCAAAGTATTGAAGGAAAGCTATTTTATAAAAACATTAAATTCTGGCCTCTCTGGTATCCTACATTATCCGCAAAGGGCGAGAAGCCGCGACGTCGTTTTCAGACACGGCTTCGATAGTGAAGCAACGATTCAATAGTTGACAAGTGGTTTTGGTTTGATATATAGATGTGGTGCGCGTCGTGTTGTTCGAAGGAAGTGAAGTAAAGACTAAAGAGAGTTGTGGTGTGGTGGTGGTTGTCGTTTTTGAAATGGCAGCGTCGTCGTCAGAGAAGCAAGTGGTGGTGATAGGCATAGACGACAGCGAGCAGAGCACGTACGCGTTGAATTGGGCTCTGGATAACTTTTTCCCGAGCCCAATTTTCAAGCTCGTTCTCATCCACTCCAGGCCCACCGCCACCTCCGCTGTGGGCTTCGCCGGCCCTGTGTTTGCAGGAGCCGCTGAGGTCTTGCCTATTGTAGATTCCGATTTGAGAAAGATTGGCGCCAGAGTCCTCGAAACCGCTAAACAACTTTGCATCAACAAATCCGTAAATGATGTGACAGCAGAAGTGGTGGAAGGTGATCCTAGAAATGTTCTTTGTGATGCTGTAGATAAGTACCGTGCTGCAATGTTGGTTGTGGGTAGTCATGGTTATGGGGCTATAAAAAGGTAGTGTCAGTGACTATTGTGCTCATCATGCTCACTGCACTGTGATGATCGTGAAGAAGCCAAAAATCAAACACTGATCTGTAATGGCTGCGTCTATATAGTACAACAATAAACATAATCCTTTCAGCCAAAGAAGAGAGAAAGAAAATAATGTTCACAGAAATTCGTAACTATGCTTGTTGTATGGATATGGCTTATTGACTTTATGGTTTGATACGTTGAGGCACAGTTTATTTTTAAAGATGGAACCATCAGAAAATATGTACGTATCAGGACTTTACCTTACATTGTACACGAAAAGTTCTTGAACTGATGAGTTCAATTCCATTACTGCTCTTTTCATCCTTAATAAAATAAAATAGTAAAAAAATATTGTACTAGTTTATTGCAATGCACTACTAGCCTGAACAATTTCTAGTTATTCATTTGTTGGCTTGAATATGATTTTGGTTATGGAAAGATAGGGTTATTTTGATTTTAGTCCCGTAATTTTTAGTGTACCAATGTGCTGGTTAATAATAATAATAAAAAAAGGTGTACTAGTGTGCTGCGTTGCACTGTAATTTTTAGGTTGAATTTCTTATGCATTTAAAATAATTTATAACGTCAATCTAGTTGACGGGTAATTT
>Glyma02g17470.4 sequence type=transcript gene model=Glyma02g17470 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GGCTCATTCGAGATTTGAATGAAAGTATCGTACGCTACATACCAATAAAGGGGAAAAAAAAAAGTATCTAACTCTACAATTATTTTAAACAAATTTAGTTTTAATCTTATCTTAGGGAGCATATTCAGCGTGCTTCAACTTGATTATCATTCGAGTGGTTTTGTATATATTGGCTAAGAAAACAAAATTAAAAATAAGTTATTATATTTTAAAATAATTCAAAGTATTGAAGGAAAGCTATTTTATAAAAACATTAAATTCTGGCCTCTCTGGTATCCTACATTATCCGCAAAGGGCGAGAAGCCGCGACGTCGTTTTCAGACACGGCTTCGATAGTGAAGCAACGATTCAATAGTTGACAAGTGGTTTTGGTTTGATATATAGATGTGGTGCGCGTCGTGTTGTTCGAAGGAAGTGAAGTAAAGACTAAAGAGAGTTGTGGTGTGGTGGTGGTTGTCGTTTTTGAAATGGCAGCGTCGTCGTCAGAGAAGCAAGTGGTGGTGATAGGCATAGACGACAGCGAGCAGAGCACGTACGCGTTGAATTGGGCTCTGGATAACTTTTTCCCGAGCCCAATTTTCAAGCTCGTTCTCATCCACTCCAGGCCCACCGCCACCTCCGCTGTGGGCTTCGCCGGCCCTGATTCCGATTTGAGAAAGATTGGCGCCAGAGTCCTCGAAACCGCTAAACAACTTTGCATCAACAAATCCGTAAATGATGTGACAGCAGAAGTGGTGGAAGGTGATCCTAGAAATGTTCTTTGTGATGCTGTAGATAAGTACCGTGCTGCAATGTTGGTTGTGGGTAGTCATGGTTATGGGGCTATAAAAAGGGCGGTTTTAGGTAGTGTCAGTGACTATTGTGCTCATCATGCTCACTGCACTGTGATGATCGTGAAGAAGCCAAAAATCAAACACTGATCTGTAATGGCTGCGTCTATATAGTACAACAATAAACATAATCCTTTCAGCCAAAGAAGAGAGAAAGAAAATAATGTTCACAGAAATTCGTAACTATGCTTGTTGTATGGATATGGCTTATTGACTTTATGGTTTGATACGTTGAGGCACAGTTTATTTTTAAAGATGGAACCATCAGAAAATATGTACGTATCAGGACTTTACCTTACATTGTACACGAAAAGTTCTTGAACTGATGAGTTCAATTCCATTACTGCTCTTTTCATCCTTAATAAAATAAAATAGTAAAAAAATATTGTACTAGTTTATTGCAATGCACTACTAGCCTGAACAATTTCTAGTTATTCATTTGTTGGCTTGAATATGATTTTGGTTATGGAAAGATAGGGTTATTTTGATTTTAGTCCCGTAATTTTTAGTGTACCAATGTGCTGGTTAATAATAATAATAAAAAAAGGTGTACTAGTGTGCTGCGTTGCACTGTAATTTTTAGGTTGAATTTCTTATGCATTTAAAATAATTTATAACGTCAATCTAGTTGACGGGTAATTT
>Glyma02g17470.5 sequence type=transcript gene model=Glyma02g17470 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GGCTCATTCGAGATTTGAATGAAAGTATCGTACGCTACATACCAATAAAGGGGAAAAAAAAAAGTATCTAACTCTACAATTATTTTAAACAAATTTAGTTTTAATCTTATCTTAGGGAGCATATTCAGCGTGCTTCAACTTGATTATCATTCGAGTGGTTTTGTATATATTGGCTAAGAAAACAAAATTAAAAATAAGTTATTATATTTTAAAATAATTCAAAGTATTGAAGGAAAGCTATTTTATAAAAACATTAAATTCTGGCCTCTCTGGTATCCTACATTATCCGCAAAGGGCGAGAAGCCGCGACGTCGTTTTCAGACACGGCTTCGATAGTGAAGCAACGATTCAATAGTTGACAAGTGGTTTTGGTTTGATATATAGATGTGGTGCGCGTCGTGTTGTTCGAAGGAAGTGAAGTAAAGACTAAAGAGAGTTGTGGTGTGGTGGTGGTTGTCGTTTTTGAAATGGCAGCGTCGTCGTCAGAGAAGCAAGTGGTGGTGATAGGCATAGACGACAGCGAGCAGAGCACGTACGCGTTGAATTGGGCTCTGGATAACTTTTTCCCGAGCCCAATTTTCAAGCTCGTTCTCATCCACTCCAGGCCCACCGCCACCTCCGCTGTGGGCTTCGCCGGCCCTGCCGCTGAGGTCTTGCCTATTGTAGATTCCGATTTGAGAAAGATTGGCGCCAGAGTCCTCGAAACCGCTAAACAACTTTGCATCAACAAATCCGTAAATGATGTGACAGCAGAAGTGGTGGAAGGTGATCCTAGAAATGTTCTTTGTGATGCTGTAGATAAGTACCGTGCTGCAATGTTGGTTGTGGGTAGTCATGGTTATGGGGCTATAAAAAGGGCGGTTTTAGGTAGTGTCAGTGACTATTGTGCTCATCATGCTCACTGCACTGTGATGATCGTGAAGAAGCCAAAAATCAAACACTGATCTGTAATGGCTGCGTCTATATAGTACAACAATAAACATAATCCTTTCAGCCAAAGAAGAGAGAAAGAAAATAATGTTCACAGAAATTCGTAACTATGCTTGTTGTATGGATATGGCTTATTGACTTTATGGTTTGATACGTTGAGGCACAGTTTATTTTTAAAGATGGAACCATCAGAAAATATGTACGTATCAGGACTTTACCTTACATTGTACACGAAAAGTTCTTGAACTGATGAGTTCAATTCCATTACTGCTCTTTTCATCCTTAATAAAATAAAATAGTAAAAAAATATTGTACTAGTTTATTGCAATGCACTACTAGCCTGAACAATTTCTAGTTATTCATTTGTTGGCTTGAATATGATTTTGGTTATGGAAAGATAGGGTTATTTTGATTTTAGTCCCGTAATTTTTAGTGTACCAATGTGCTGGTTAATAATAATAATAAAAAAAGGTGTACTAGTGTGCTGCGTTGCACTGTAATTTTTAGGTTGAATTTCTTATGCATTTAAAATAATTTATAACGTCAATCTAGTTGACGGGTAATTT
>Glyma02g17470.6 sequence type=transcript gene model=Glyma02g17470 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GGCTCATTCGAGATTTGAATGAAAGTATCGTACGCTACATACCAATAAAGGGGAAAAAAAAAAGTATCTAACTCTACAATTATTTTAAACAAATTTAGTTTTAATCTTATCTTAGGGAGCATATTCAGCGTGCTTCAACTTGATTATCATTCGAGTGGTTTTGTATATATTGGCTAAGAAAACAAAATTAAAAATAAGTTATTATATTTTAAAATAATTCAAAGTATTGAAGGAAAGCTATTTTATAAAAACATTAAATTCTGGCCTCTCTGGTATCCTACATTATCCGCAAAGGGCGAGAAGCCGCGACGTCGTTTTCAGACACGGCTTCGATAGTGAAGCAACGATTCAATAGTTGACAAGTGGTTTTGGTTTGATATATAGATGTGGTGCGCGTCGTGTTGTTCGAAGGAAGTGAAGTAAAGACTAAAGAGAGTTGTGGTGTGGTGGTGGTTGTCGTTTTTGAAATGGCAGCGTCGTCGTCAGAGAAGCAAGTGGTGGTGATAGGCATAGACGACAGCGAGCAGAGCACGTACGCGTTGAATTGGGCTCTGGATAACTTTTTCCCGAGCCCAATTTTCAAGCTCGTTCTCATCCACTCCAGGCCCACCGCCACCTCCGCTGTGGGCTTCGCCGGCCCTGGAGCCGCTGAGGTCTTGCCTATTGTAGATTCCGATTTGAGAAAGATTGGCGCCAGAGTCCTCGAAACCGCTAAACAACTTTGCATCAACAAATCCGTAAATGATGTGACAGCAGAAGTGGTGGAAGGTGATCCTAGAAATGTTCTTTGTGATGCTGTAGATAAGTACCGTGCTGCAATGTTGGTTGTGGGTAGTCATGGTTATGGGGCTATAAAAAGGGCGGTTTTAGGTAGTGTCAGTGACTATTGTGCTCATCATGCTCACTGCACTGTGATGATCGTGAAGAAGCCAAAAATCAAACACTGATCTGTAATGGCTGCGTCTATATAGTACAACAATAAACATAATCCTTTCAGCCAAAGAAGAGAGAAAGAAAATAATGTTCACAGAAATTCGTAACTATGCTTGTTGTATGGATATGGCTTATTGACTTTATGGTTTGATACGTTGAGGCACAGTTTATTTTTAAAGATGGAACCATCAGAAAATATGTACGTATCAGGACTTTACCTTACATTGTACACGAAAAGTTCTTGAACTGATGAGTTCAATTCCATTACTGCTCTTTTCATCCTTAATAAAATAAAATAGTAAAAAAATATTGTACTAGTTTATTGCAATGCACTACTAGCCTGAACAATTTCTAGTTATTCATTTGTTGGCTTGAATATGATTTTGGTTATGGAAAGATAGGGTTATTTTGATTTTAGTCCCGTAATTTTTAGTGTACCAATGTGCTGGTTAATAATAATAATAAAAAAAGGTGTACTAGTGTGCTGCGTTGCACTGTAATTTTTAGGTTGAATTTCTTATGCATTTAAAATAATTTATAACGTCAATCTAGTTGACGGGTAATTT
Coding sequences of Glyma02g17470
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma02g17470.2 sequence type=CDS gene model=Glyma02g17470 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCAGCGTCGTCGTCAGAGAAGCAAGTGGTGGTGATAGGCATAGACGACAGCGAGCAGAGCACGTACGCGTTGAATTGGGCTCTGGATAACTTTTTCCCGAGCCCAATTTTCAAGCTCGTTCTCATCCACTCCAGGCCCACCGCCACCTCCGCTGTGGGCTTCGCCGGCCCTGGAGCCGCTGAGGTCTTGCCTATTGTAGATTCCGATTTGAGAAAGATTGGCGCCAGAGTCCTCGAAACCGCTAAACAACTTTGCATCAACAAATCCGTAATTCTGTTTTTCTTCCTCTTTCCATGCCTTTTCGTTAATCTCTTAATCCTTCTTCTGCATGTTTGTTTTTCACGTTTAACTTTACCGGTTAACGTGATTTTAGGTAAATTTTCGTATGCATGA
>Glyma02g17470.3 sequence type=CDS gene model=Glyma02g17470 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCAGCGTCGTCGTCAGAGAAGCAAGTGGTGGTGATAGGCATAGACGACAGCGAGCAGAGCACGTACGCGTTGAATTGGGCTCTGGATAACTTTTTCCCGAGCCCAATTTTCAAGCTCGTTCTCATCCACTCCAGGCCCACCGCCACCTCCGCTGTGGGCTTCGCCGGCCCTGTGTTTGCAGGAGCCGCTGAGGTCTTGCCTATTGTAGATTCCGATTTGAGAAAGATTGGCGCCAGAGTCCTCGAAACCGCTAAACAACTTTGCATCAACAAATCCGTAAATGATGTGACAGCAGAAGTGGTGGAAGGTGATCCTAGAAATGTTCTTTGTGATGCTGTAGATAAGTACCGTGCTGCAATGTTGGTTGTGGGTAGTCATGGTTATGGGGCTATAAAAAGGTAG
>Glyma02g17470.4 sequence type=CDS gene model=Glyma02g17470 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCAGCGTCGTCGTCAGAGAAGCAAGTGGTGGTGATAGGCATAGACGACAGCGAGCAGAGCACGTACGCGTTGAATTGGGCTCTGGATAACTTTTTCCCGAGCCCAATTTTCAAGCTCGTTCTCATCCACTCCAGGCCCACCGCCACCTCCGCTGTGGGCTTCGCCGGCCCTGATTCCGATTTGAGAAAGATTGGCGCCAGAGTCCTCGAAACCGCTAAACAACTTTGCATCAACAAATCCGTAAATGATGTGACAGCAGAAGTGGTGGAAGGTGATCCTAGAAATGTTCTTTGTGATGCTGTAGATAAGTACCGTGCTGCAATGTTGGTTGTGGGTAGTCATGGTTATGGGGCTATAAAAAGGGCGGTTTTAGGTAGTGTCAGTGACTATTGTGCTCATCATGCTCACTGCACTGTGATGATCGTGAAGAAGCCAAAAATCAAACACTGA
>Glyma02g17470.5 sequence type=CDS gene model=Glyma02g17470 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCAGCGTCGTCGTCAGAGAAGCAAGTGGTGGTGATAGGCATAGACGACAGCGAGCAGAGCACGTACGCGTTGAATTGGGCTCTGGATAACTTTTTCCCGAGCCCAATTTTCAAGCTCGTTCTCATCCACTCCAGGCCCACCGCCACCTCCGCTGTGGGCTTCGCCGGCCCTGCCGCTGAGGTCTTGCCTATTGTAGATTCCGATTTGAGAAAGATTGGCGCCAGAGTCCTCGAAACCGCTAAACAACTTTGCATCAACAAATCCGTAAATGATGTGACAGCAGAAGTGGTGGAAGGTGATCCTAGAAATGTTCTTTGTGATGCTGTAGATAAGTACCGTGCTGCAATGTTGGTTGTGGGTAGTCATGGTTATGGGGCTATAAAAAGGGCGGTTTTAGGTAGTGTCAGTGACTATTGTGCTCATCATGCTCACTGCACTGTGATGATCGTGAAGAAGCCAAAAATCAAACACTGA
>Glyma02g17470.6 sequence type=CDS gene model=Glyma02g17470 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCAGCGTCGTCGTCAGAGAAGCAAGTGGTGGTGATAGGCATAGACGACAGCGAGCAGAGCACGTACGCGTTGAATTGGGCTCTGGATAACTTTTTCCCGAGCCCAATTTTCAAGCTCGTTCTCATCCACTCCAGGCCCACCGCCACCTCCGCTGTGGGCTTCGCCGGCCCTGGAGCCGCTGAGGTCTTGCCTATTGTAGATTCCGATTTGAGAAAGATTGGCGCCAGAGTCCTCGAAACCGCTAAACAACTTTGCATCAACAAATCCGTAAATGATGTGACAGCAGAAGTGGTGGAAGGTGATCCTAGAAATGTTCTTTGTGATGCTGTAGATAAGTACCGTGCTGCAATGTTGGTTGTGGGTAGTCATGGTTATGGGGCTATAAAAAGGGCGGTTTTAGGTAGTGTCAGTGACTATTGTGCTCATCATGCTCACTGCACTGTGATGATCGTGAAGAAGCCAAAAATCAAACACTGA
Predicted protein sequences of Glyma02g17470
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma02g17470.2 sequence type=predicted peptide gene model=Glyma02g17470 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAASSSEKQVVVIGIDDSEQSTYALNWALDNFFPSPIFKLVLIHSRPTATSAVGFAGPGAAEVLPIVDSDLRKIGARVLETAKQLCINKSVILFFFLFPCLFVNLLILLLHVCFSRLTLPVNVILGKFSYA*
>Glyma02g17470.3 sequence type=predicted peptide gene model=Glyma02g17470 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAASSSEKQVVVIGIDDSEQSTYALNWALDNFFPSPIFKLVLIHSRPTATSAVGFAGPVFAGAAEVLPIVDSDLRKIGARVLETAKQLCINKSVNDVTAEVVEGDPRNVLCDAVDKYRAAMLVVGSHGYGAIKR*
>Glyma02g17470.4 sequence type=predicted peptide gene model=Glyma02g17470 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAASSSEKQVVVIGIDDSEQSTYALNWALDNFFPSPIFKLVLIHSRPTATSAVGFAGPDSDLRKIGARVLETAKQLCINKSVNDVTAEVVEGDPRNVLCDAVDKYRAAMLVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKIKH*
>Glyma02g17470.5 sequence type=predicted peptide gene model=Glyma02g17470 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAASSSEKQVVVIGIDDSEQSTYALNWALDNFFPSPIFKLVLIHSRPTATSAVGFAGPAAEVLPIVDSDLRKIGARVLETAKQLCINKSVNDVTAEVVEGDPRNVLCDAVDKYRAAMLVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKIKH*
>Glyma02g17470.6 sequence type=predicted peptide gene model=Glyma02g17470 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAASSSEKQVVVIGIDDSEQSTYALNWALDNFFPSPIFKLVLIHSRPTATSAVGFAGPGAAEVLPIVDSDLRKIGARVLETAKQLCINKSVNDVTAEVVEGDPRNVLCDAVDKYRAAMLVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKIKH*