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Report for Sequence Feature Glyma02g17150

Feature Type:gene_model
Chromosome:Gm02
Start:15453645
stop:15457019
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G03470AT Annotation by Michelle Graham. TAIR10: Kinase interacting (KIP1-like) family protein | chr1:866217-867493 REVERSE LENGTH=269 SoyBaseE_val: 3.00E-42ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0005774GO-cc Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane SoyBaseN/AISS
GO:0005884GO-cc Annotation by Michelle Graham. GO Cellular Compartment: actin filament SoyBaseN/AISS
GO:0031965GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nuclear membrane SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
PF07765PFAM KIP1-like protein JGI ISS
UniRef100_D7KCF2UniRef Annotation by Michelle Graham. Most informative UniRef hit: Kinase interacting family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KCF2_ARALL SoyBaseE_val: 8.00E-35ISS
UniRef100_I1JFG0UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JFG0_SOYBN SoyBaseE_val: 0ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma02g17150 not represented in the dataset

Glyma02g17150 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

ParalogEvidenceComments
Glyma10g02640 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Corresponding NameAnnotation VersionEvidenceComments
Glyma.02g152600 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma02g17150.3   sequence type=transcript   gene model=Glyma02g17150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AATTTATCGACTAAGACGTGCTAATTTCGTGATTAAGACCTGCTAATTGTTTTTGTTATTTATTATCTAATGATGATTTTTCGATCTTTGTTTGGGGAATTCTAGGTTTTCTTTTTGTTATTTTATTCTATGTTTTTTCATATATAGTAGGCTCTTGGTGTGATATCAAAGACAACAGAGGATTGCTGAAATGATGAAGAATCAACAGTCACAGTGGTGGTGGCTTGAGAGCCACAACCACACAAGACGATCCCCATGGCTTCAATCCACTCTTACAGAGCTAAATGAGAAGACCAAGGCAATGTTAAAGCTAATTGAAGAAGATGCAGATTCCTTTGCCCAACGTGCAGAGATGTATTACAAGAAGAGACCACAGCTTGTGAGCATGGTTGAAGATTTCTATAGGACACACCGCTCATTAGCCGAGCGGTATGATCAAGTCACTGGAATTCGCCAGCAGAAGACAGGATCACCTTTTTCTCCAATCAAGAATCATCAATCAGAGAAGTTGATGAGTTTTACACATGACAGTTATGATAGCTATTCTGAGTGTTTTGATGTAGAGGAGTCTGTGGAATCTGAAGTTGATGATCCTGAGCAAGAAGAGGAAGAGGTTACCAAATTTGATAACTGTATAGAAGAGGAGGAAGTTAAGATTGTGGCTGCAAATGATGAAGTGATGGGGCTGAGGAAAGAAATCAACAGACTTGGTGAAGAGAACAAGGATCATAAAGATCAAATTAAGGAGAAATATAACGTTTATGATGAAGTTATGGTGTTGAGGGAAGAAGTAGAAGGACTCAGAAAAGAGAATAGAGTGCAGAAGGATGAGCTCAACCAGAAAAGTATCATTTGTGGTGAAGTAATGATATTGAGGGAAGAAATAGAACGACTCAAAGAAGAGAATAGAGAGCAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATTGAAGGACTCAGAAAAGAGAATAGAGAGCAGAAAGATGAACTCAACCAGAAAAGTATCATTTGTAGTGAAGTAATGATGTTGAGGGAAGAAATAGAACGACTCAGAAAAGAGAATAGAGAGCAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATTGGACTCAGAAAAGAGAATAGAGTGCAGAAGGGTGAACTCCACCAGAAAGGTACCATTTGTGGTGACGTAATGATGTTGAGAGAAGAAATAGAACGACTCAGAAAAGAGAATAGAGTGCAAAATGATGAACTCAAGCAGAAAGGTACCATTTATGGTGAAGTAATGATGTTAAGGAAGGAGATAGAAAGAGTCAGCGAAGAGAATATGGTACAGAAGGACCATCTCATGCAAAAAGACCTAGAGAAAATAGAGGTGATTAGACACCTGAGTTTAGCTATAGATGTGCTGAAGCAGGAGAATGTAAAGATGAGAAGCTTCATTGCTAAGGAATTTACCAACAAATGGAACAACCCATTTGAGTTTAAAAAACTCATGGGATCATTATCGATGAAGTTGTTTAATGGAAAGAATCAACCTAGTATTGTAGCTCTATAGATATGGTTCAGAAAGTAAATAGCGTAGTTCTGTAGAGCAATCTTATAAAAATGTCTACGTAAATATTTTGGGGACTTATCAAGTAACCCACAATTCTTGTAAACAGTACATTCCTAATCAGAGAATCCTAGTAGACTTTCCTATACAACTAATTAATATTTTTATACATCCTTCGTTAGCGAGATATGCA

>Glyma02g17150.4   sequence type=transcript   gene model=Glyma02g17150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AATTACTGCATTATTTAAGCACCATTTCACTTACTAAAAATCCGCACACAATTTTCGTGCTTTGAAAATGCTCCCATAAATTATGGCAGCGGGTTCATTGACTGAATTTGAATCTTAGTTGTACTTGCATTAGGCTCGAGGCATAGGGTTGATTCTGAAGTGTAAAATACACGTGTCACGACATCACAGGTAGAAGCTCTCAAATGAGACAAACAAAGAAATTCAAAACCGAAAACAACAGTACTATAATACTATGGTTCTATATGTAGTATCTTCATATATCTTGTTCTGCCTGAACTCTACTTCTACCACTAACTCAGGCTCTTGGTGTGATATCAAAGACAACAGAGGATTGCTGAAATGATGAAGAATCAACAGTCACAGTGGTGGTGGCTTGAGAGCCACAACCACACAAGACGATCCCCATGGCTTCAATCCACTCTTACAGAGCTAAATGAGAAGACCAAGGCAATGTTAAAGCTAATTGAAGAAGATGCAGATTCCTTTGCCCAACGTGCAGAGATGTATTACAAGAAGAGACCACAGCTTGTGAGCATGGTTGAAGATTTCTATAGGACACACCGCTCATTAGCCGAGCGGTATGATCAAGTCACTGGAATTCGCCAGCAGAAGACAGGATCACCTTTTTCTCCAATCAAGAATCATCAATCAGAGAAGTTGATGAGTTTTACACATGACAGTTATGATAGCTATTCTGAGTGTTTTGATGTAGAGGAGTCTGTGGAATCTGAAGTTGATGATCCTGAGCAAGAAGAGGAAGAGGTTACCAAATTTGATAACTGTATAGAAGAGGAGGAAGTTAAGATTGTGGCTGCAAATGATGAAGTGATGGGGCTGAGGAAAGAAATCAACAGACTTGGTGAAGAGAACAAGGATCATAAAGATCAAATTAAGGAGAAATATAACGTTTATGATGAAGTTATGGTGTTGAGGGAAGAAGTAGAAGGACTCAGAAAAGAGAATAGAGTGCAGAAGGATGAGCTCAACCAGAAAAGTATCATTTGTGGTGAAGTAATGATATTGAGGGAAGAAATAGAACGACTCAAAGAAGAGAATAGAGAGCAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATTGAAGGACTCAGAAAAGAGAATAGAGAGCAGAAAGATGAACTCAACCAGAAAAGTATCATTTGTAGTGAAGTAATGATGTTGAGGGAAGAAATAGAACGACTCAGAAAAGAGAATAGAGAGCAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATTGGACTCAGAAAAGAGAATAGAGTGCAGAAGGGTGAACTCCACCAGAAAGGTACCATTTGTGGTGACGTAATGATGTTGAGAGAAGAAATAGAACGACTCAGAAAAGAGAATAGAGTGCAAAATGATGAACTCAAGCAGAAAGGTACCATTTATGGTGAAGTAATGATGTTAAGGAAGGAGATAGAAAGAGTCAGCGAAGAGAATATGGTACAGAAGGACCATCTCATGCAAAAAGACCTAGAGAAAATAGAGGTGATTAGACACCTGAGTTTAGCTATAGATGTGCTGAAGCAGGAGAATGTAAAGATGAGAAGCTTCATTGCTAAGGAATTTACCAACAAATGGAACAACCCATTTGAGTTTAAAAAACTCATGGGATCATTATCGATGAAGTTGTTTAATGGAAAGAATCAACCTAGTATTGTAGCTCTATAGATATGGTTCAGAAAGTAAATAGCGTAGTTCTGTAGAGCAATCTTATAAAAATGTCTACGTAAATATTTTGGGGACTTATCAAGTAACCCACAATTCTTGTAAACAGTACATTCCTAATCAGAGAATCCTAGTAGACTTTCCTATACAACTAATTAATATTTTTATACATCCTTCGTTAGCGAGATATGCA

>Glyma02g17150.2   sequence type=CDS   gene model=Glyma02g17150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGATGAAGAATCAACAGTCACAGTGGTGGTGGCTTGAGAGCCACAACCACACAAGACGATCCCCATGGCTTCAATCCACTCTTACAGAGCTAAATGAGAAGACCAAGGCAATGTTAAAGCTAATTGAAGAAGATGCAGATTCCTTTGCCCAACGTGCAGAGATGTATTACAAGAAGAGACCACAGCTTGTGAGCATGGTTGAAGATTTCTATAGGACACACCGCTCATTAGCCGAGCGGTATGATCAAGTCACTGGAATTCGCCAGCAGAAGACAGGATCACCTTTTTCTCCAATCAAGAATCATCAATCAGAGAAGTTGATGAGTTTTACACATGACAGTTATGATAGCTATTCTGAGTGTTTTGATGTAGAGGAGTCTGTGGAATCTGAAGTTGATGATCCTGAGCAAGAAGAGGAAGAGGTTACCAAATTTGATAACTGTATAGAAGAGGAGGAAGTTAAGATTGTGGCTGCAAATGATGAAGTGATGGGGCTGAGGAAAGAAATCAACAGACTTGGTGAAGAGAACAAGGATCATAAAGATCAAATTAAGGAGAAATATAACGTTTATGATGAAGTTATGGTGTTGAGGGAAGAAGTAGAAGGACTCAGAAAAGAGAATAGAGTGCAGAAGGATGAGCTCAACCAGAAAAGTATCATTTGTGGTGAAGTAATGATATTGAGGGAAGAAATAGAACGACTCAAAGAAGAGAATAGAGAGCAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATTGAAGGACTCAGAAAAGAGAATAGAGAGCAGAAAGATGAACTCAACCAGAAAAGTATCATTTGTAGTGAAGTAATGATGTTGAGGGAAGAAATAGAACGACTCAGAAAAGAGAATAGAGAGCAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATTGGACTCAGAAAAGAGAATAGAGTGCAGAAGGGTGAACTCCACCAGAAAGGTACCATTTGTGGTGACGTAATGATGTTGAGAGAAGAAATAGAACGACTCAGAAAAGAGAATAGAGTGCAAAATGATGAACTCAAGCAGAAAGGTACCATTTATGGTGAAGTAATGATGTTAAGGAAGGAGATAGAAAGAGTCAGCGAAGAGAATATGGTACAGAAGGACCATCTCATGCAAAAAGACCTAGAGAAAATAGAGGTGATTAGACACCTGAGTTTAGCTATAGATGTGCTGAAGCAGGAGAATGTAAAGATGAGAAGCTTCATTGCTAAGGAATTTACCAACAAATGGAACAACCCATTTGAGTTTAAAAAACTCATGGGATCATTATCGATGAAGTTGTTTAATGGAAAGAATCAACCTAGTATTGTAGCTCTATAG

>Glyma02g17150.3   sequence type=CDS   gene model=Glyma02g17150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGATGAAGAATCAACAGTCACAGTGGTGGTGGCTTGAGAGCCACAACCACACAAGACGATCCCCATGGCTTCAATCCACTCTTACAGAGCTAAATGAGAAGACCAAGGCAATGTTAAAGCTAATTGAAGAAGATGCAGATTCCTTTGCCCAACGTGCAGAGATGTATTACAAGAAGAGACCACAGCTTGTGAGCATGGTTGAAGATTTCTATAGGACACACCGCTCATTAGCCGAGCGGTATGATCAAGTCACTGGAATTCGCCAGCAGAAGACAGGATCACCTTTTTCTCCAATCAAGAATCATCAATCAGAGAAGTTGATGAGTTTTACACATGACAGTTATGATAGCTATTCTGAGTGTTTTGATGTAGAGGAGTCTGTGGAATCTGAAGTTGATGATCCTGAGCAAGAAGAGGAAGAGGTTACCAAATTTGATAACTGTATAGAAGAGGAGGAAGTTAAGATTGTGGCTGCAAATGATGAAGTGATGGGGCTGAGGAAAGAAATCAACAGACTTGGTGAAGAGAACAAGGATCATAAAGATCAAATTAAGGAGAAATATAACGTTTATGATGAAGTTATGGTGTTGAGGGAAGAAGTAGAAGGACTCAGAAAAGAGAATAGAGTGCAGAAGGATGAGCTCAACCAGAAAAGTATCATTTGTGGTGAAGTAATGATATTGAGGGAAGAAATAGAACGACTCAAAGAAGAGAATAGAGAGCAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATTGAAGGACTCAGAAAAGAGAATAGAGAGCAGAAAGATGAACTCAACCAGAAAAGTATCATTTGTAGTGAAGTAATGATGTTGAGGGAAGAAATAGAACGACTCAGAAAAGAGAATAGAGAGCAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATTGGACTCAGAAAAGAGAATAGAGTGCAGAAGGGTGAACTCCACCAGAAAGGTACCATTTGTGGTGACGTAATGATGTTGAGAGAAGAAATAGAACGACTCAGAAAAGAGAATAGAGTGCAAAATGATGAACTCAAGCAGAAAGGTACCATTTATGGTGAAGTAATGATGTTAAGGAAGGAGATAGAAAGAGTCAGCGAAGAGAATATGGTACAGAAGGACCATCTCATGCAAAAAGACCTAGAGAAAATAGAGGTGATTAGACACCTGAGTTTAGCTATAGATGTGCTGAAGCAGGAGAATGTAAAGATGAGAAGCTTCATTGCTAAGGAATTTACCAACAAATGGAACAACCCATTTGAGTTTAAAAAACTCATGGGATCATTATCGATGAAGTTGTTTAATGGAAAGAATCAACCTAGTATTGTAGCTCTATAG

>Glyma02g17150.4   sequence type=CDS   gene model=Glyma02g17150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGATGAAGAATCAACAGTCACAGTGGTGGTGGCTTGAGAGCCACAACCACACAAGACGATCCCCATGGCTTCAATCCACTCTTACAGAGCTAAATGAGAAGACCAAGGCAATGTTAAAGCTAATTGAAGAAGATGCAGATTCCTTTGCCCAACGTGCAGAGATGTATTACAAGAAGAGACCACAGCTTGTGAGCATGGTTGAAGATTTCTATAGGACACACCGCTCATTAGCCGAGCGGTATGATCAAGTCACTGGAATTCGCCAGCAGAAGACAGGATCACCTTTTTCTCCAATCAAGAATCATCAATCAGAGAAGTTGATGAGTTTTACACATGACAGTTATGATAGCTATTCTGAGTGTTTTGATGTAGAGGAGTCTGTGGAATCTGAAGTTGATGATCCTGAGCAAGAAGAGGAAGAGGTTACCAAATTTGATAACTGTATAGAAGAGGAGGAAGTTAAGATTGTGGCTGCAAATGATGAAGTGATGGGGCTGAGGAAAGAAATCAACAGACTTGGTGAAGAGAACAAGGATCATAAAGATCAAATTAAGGAGAAATATAACGTTTATGATGAAGTTATGGTGTTGAGGGAAGAAGTAGAAGGACTCAGAAAAGAGAATAGAGTGCAGAAGGATGAGCTCAACCAGAAAAGTATCATTTGTGGTGAAGTAATGATATTGAGGGAAGAAATAGAACGACTCAAAGAAGAGAATAGAGAGCAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATTGAAGGACTCAGAAAAGAGAATAGAGAGCAGAAAGATGAACTCAACCAGAAAAGTATCATTTGTAGTGAAGTAATGATGTTGAGGGAAGAAATAGAACGACTCAGAAAAGAGAATAGAGAGCAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATTGGACTCAGAAAAGAGAATAGAGTGCAGAAGGGTGAACTCCACCAGAAAGGTACCATTTGTGGTGACGTAATGATGTTGAGAGAAGAAATAGAACGACTCAGAAAAGAGAATAGAGTGCAAAATGATGAACTCAAGCAGAAAGGTACCATTTATGGTGAAGTAATGATGTTAAGGAAGGAGATAGAAAGAGTCAGCGAAGAGAATATGGTACAGAAGGACCATCTCATGCAAAAAGACCTAGAGAAAATAGAGGTGATTAGACACCTGAGTTTAGCTATAGATGTGCTGAAGCAGGAGAATGTAAAGATGAGAAGCTTCATTGCTAAGGAATTTACCAACAAATGGAACAACCCATTTGAGTTTAAAAAACTCATGGGATCATTATCGATGAAGTTGTTTAATGGAAAGAATCAACCTAGTATTGTAGCTCTATAG

>Glyma02g17150.2   sequence type=predicted peptide   gene model=Glyma02g17150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MMKNQQSQWWWLESHNHTRRSPWLQSTLTELNEKTKAMLKLIEEDADSFAQRAEMYYKKRPQLVSMVEDFYRTHRSLAERYDQVTGIRQQKTGSPFSPIKNHQSEKLMSFTHDSYDSYSECFDVEESVESEVDDPEQEEEEVTKFDNCIEEEEVKIVAANDEVMGLRKEINRLGEENKDHKDQIKEKYNVYDEVMVLREEVEGLRKENRVQKDELNQKSIICGEVMILREEIERLKEENREQKDELNQKDIICGEVMMLREEIEGLRKENREQKDELNQKSIICSEVMMLREEIERLRKENREQKDELNQKDIICGEVMMLREEIGLRKENRVQKGELHQKGTICGDVMMLREEIERLRKENRVQNDELKQKGTIYGEVMMLRKEIERVSEENMVQKDHLMQKDLEKIEVIRHLSLAIDVLKQENVKMRSFIAKEFTNKWNNPFEFKKLMGSLSMKLFNGKNQPSIVAL*

>Glyma02g17150.3   sequence type=predicted peptide   gene model=Glyma02g17150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MMKNQQSQWWWLESHNHTRRSPWLQSTLTELNEKTKAMLKLIEEDADSFAQRAEMYYKKRPQLVSMVEDFYRTHRSLAERYDQVTGIRQQKTGSPFSPIKNHQSEKLMSFTHDSYDSYSECFDVEESVESEVDDPEQEEEEVTKFDNCIEEEEVKIVAANDEVMGLRKEINRLGEENKDHKDQIKEKYNVYDEVMVLREEVEGLRKENRVQKDELNQKSIICGEVMILREEIERLKEENREQKDELNQKDIICGEVMMLREEIEGLRKENREQKDELNQKSIICSEVMMLREEIERLRKENREQKDELNQKDIICGEVMMLREEIGLRKENRVQKGELHQKGTICGDVMMLREEIERLRKENRVQNDELKQKGTIYGEVMMLRKEIERVSEENMVQKDHLMQKDLEKIEVIRHLSLAIDVLKQENVKMRSFIAKEFTNKWNNPFEFKKLMGSLSMKLFNGKNQPSIVAL*

>Glyma02g17150.4   sequence type=predicted peptide   gene model=Glyma02g17150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MMKNQQSQWWWLESHNHTRRSPWLQSTLTELNEKTKAMLKLIEEDADSFAQRAEMYYKKRPQLVSMVEDFYRTHRSLAERYDQVTGIRQQKTGSPFSPIKNHQSEKLMSFTHDSYDSYSECFDVEESVESEVDDPEQEEEEVTKFDNCIEEEEVKIVAANDEVMGLRKEINRLGEENKDHKDQIKEKYNVYDEVMVLREEVEGLRKENRVQKDELNQKSIICGEVMILREEIERLKEENREQKDELNQKDIICGEVMMLREEIEGLRKENREQKDELNQKSIICSEVMMLREEIERLRKENREQKDELNQKDIICGEVMMLREEIGLRKENRVQKGELHQKGTICGDVMMLREEIERLRKENRVQNDELKQKGTIYGEVMMLRKEIERVSEENMVQKDHLMQKDLEKIEVIRHLSLAIDVLKQENVKMRSFIAKEFTNKWNNPFEFKKLMGSLSMKLFNGKNQPSIVAL*







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