SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G13560 | AT | Annotation by Michelle Graham. TAIR10: aminoalcoholphosphotransferase 1 | chr1:4638834-4641691 REVERSE LENGTH=389 | SoyBase | E_val: 0 | ISS |
| GO:0008654 | GO-bp | Annotation by Michelle Graham. GO Biological Process: phospholipid biosynthetic process | SoyBase | N/A | ISS |
| GO:0046686 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to cadmium ion | SoyBase | N/A | ISS |
| GO:0005794 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus | SoyBase | N/A | ISS |
| GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
| GO:0016780 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: phosphotransferase activity, for other substituted phosphate groups | SoyBase | N/A | ISS |
| GO:0030572 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: phosphatidyltransferase activity | SoyBase | N/A | ISS |
| KOG2877 | KOG | sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases | JGI | ISS | |
| PTHR10414 | Panther | ETHANOLAMINEPHOSPHOTRANSFERASE | JGI | ISS | |
| PTHR10414:SF4 | Panther | ETHANOLAMINEPHOSPHOTRANSFERASE | JGI | ISS | |
| PF01066 | PFAM | CDP-alcohol phosphatidyltransferase | JGI | ISS | |
| UniRef100_Q39810 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Aminoalcoholphosphotransferase n=1 Tax=Glycine max RepID=Q39810_SOYBN | SoyBase | E_val: 0 | ISS |
| UniRef100_UPI0002337A49 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI0002337A49 related cluster n=1 Tax=unknown RepID=UPI0002337A49 | SoyBase | E_val: 0 | ISS |
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Glyma02g14211 not represented in the dataset |
Glyma02g14211 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.02g128300 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma02g14211.2 sequence type=transcript gene model=Glyma02g14211 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GGGTAAAATAGGGTAATTAATAAGTGTTGAACTCAAAGGAGCTAGCGTAATTTGCTCTTATGCAACTTTGGAACTCTTTTAATCTCAACCGTTTAACTAATCCAAGGGACTGTAATTGTGCTGGAGACAATGTAGTAGGCTGTAGAGGATCCGCATCCAACCGCGAAGAGAGGTCTCTCACTCGTGACCTAACAAAGCTGGTGCTTCTTTTTCTCTGCAGCCTCTTCGATCCCGCTGGTGCTCACTTCGATCCCGTTGGCGCTCTCTTCGATTCAGCAGGTTGTGCTGAGGCTTAATTGACCCTTGAAGCATATTTCGGAGTTTTATCAGAGAACAAATGGGATATATTGGGGCTCATGGTGTTGCAGCTCTGCACAGATATAAATATAGTGGAGTAGATCATTCCTACGTGGCCAAATATGTACTACAACCCTTTTGGAGTCGCTTTGTTAATTTTTTCCCCCTATGGATGCCTCCAAACATGATAACTCTTATGGGATTTATGTTCTTACTAGTGTCTGCATTGCTTGGTTATATATACTCCCCACAATTGGACACACCTCCTCCAAGATGGGTTCATTTTGCTCATGGACTACTTCTGTTTTTATACCAGACATTTGATGCTGTTGACGGGAAGCAAGCTAGACGAACAAATTCCTCAAGCCCATTGGGGGAGCTCTTTGATCATGGGTGTGACGCACTTGCTTGCACATTTGAAGCATTGGCTTTTGGGAGCACAGCCATGTGTGGAAGAAATACTTTCTGGTGGTGGTTAATATCTGCAATTACATTTTATGGTGCAACCTGGGAGCACTATTTCACCAATACACTTATACTGCCTGTTATAAATGGGCCTACAGAGGGTCTTATGATAATATACATCTGTCACTTTTTCACTGCTATCGTGGGTGCTGAGTGGTGGGTTCAGCAATTTGGGAAGTCTTTGCCATTTTTAAATTGGCTTCCTTATCTTGCGGGAATCCCAACATTCAAAGCTATATTGTGTCTAATGATAGCTTTTGGTGTTACACCAACAGTCACATGCAATGTTAGTAATGTTTATAAGGTTGTGAAGGCAAAGAACGGAAGCATGCCACTTGCATTGGCAATGCTTTACCCATTTGTTGTACTCGTGGGAGGAGTGCTTGTGTGGGATTATTTGTCGCCATTAGACATCATGGGTAGATATCCACATTTAGTTGTCATAGGAACTGGACTTACTTTCGGTTATCTTGTGGGAAGGATGATTTTGGCACACTTATGTGATGAACCTAAGGGTCTGAAAACTGGGATGTGCATGTCCCTCATGTTTCTCCCATTGGCCATTGCAAATGTACTTGCATCCAGGCTAAATGATGGGGTTCCTTTAGTAGATGAGAGACTAGTTCTTCTTGGTTACTGTGCATTTTCAGTGACACTATACTTGCATTTTGCGACATCAGTCATTCATGAAATTACCAATGCCCTGGGAATATATTGTTTCAGGATAACTAGGAAGGAAGCTTGAATCCACCCAAGATTTCCTTTAGCTTGCAAGTCAAGGAAAATACTGGCAAGGCTTTGGTCAGTACTAATTTTGCTTTATTTAACTAACTTGGATCTTTGTAATTATATATTGATTCTTAGATAGATAGGAGATCTATTTTTTGAAATACGAGTGTTTCAATTCAGCCACCAGAAATATTTATTTTTATTTTGAATATGACTTGAAAAAAATCTGCATATTGTTTATTTTTTAATATGTGGATTTGACTTGGTTATTTGAGTATGTATAGCTGAATTTAAAATAAACCAAAATAGAACTATAAATAGAGAATATGAAAATAGAGGTCAAAGTATATTTTGAGATTTTGACTCGTGGATTTTTACGAATTAA
>Glyma02g14211.1 sequence type=CDS gene model=Glyma02g14211 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGGATATATTGGGGCTCATGGTGTTGCAGCTCTGCACAGATATAAATATAGTGGAGTAGATCATTCCTACGTGGCCAAATATGTACTACAACCCTTTTGGAGTCGCTTTGTTAATTTTTTCCCCCTATGGATGCCTCCAAACATGATAACTCTTATGGGATTTATGTTCTTACTAGTGTCTGCATTGCTTGGTTATATATACTCCCCACAATTGGACACACCTCCTCCAAGATGGGTTCATTTTGCTCATGGACTACTTCTGTTTTTATACCAGACATTTGATGCTGTTGACGGGAAGCAAGCTAGACGAACAAATTCCTCAAGCCCATTGGGGGAGCTCTTTGATCATGGGTGTGACGCACTTGCTTGCACATTTGAAGCATTGGCTTTTGGGAGCACAGCCATGTGTGGAAGAAATACTTTCTGGTGGTGGTTAATATCTGCAATTACATTTTATGGTGCAACCTGGGAGCACTATTTCACCAATACACTTATACTGCCTGTTATAAATGGGCCTACAGAGGGTCTTATGATAATATACATCTGTCACTTTTTCACTGCTATCGTGGGTGCTGAGTGGTGGGTTCAGCAATTTGGGAAGTCTTTGCCATTTTTAAATTGGCTTCCTTATCTTGCGGGAATCCCAACATTCAAAGCTATATTGTGTCTAATGATAGCTTTTGGTGTTACACCAACAGTCACATGCAATGTTAGTAATGTTTATAAGGTTGTGAAGGCAAAGAACGGAAGCATGCCACTTGCATTGGCAATGCTTTACCCATTTGTTGTACTCGTGGGAGGAGTGCTTGTGTGGGATTATTTGTCGCCATTAGACATCATGGGTAGATATCCACATTTAGTTGTCATAGGAACTGGACTTACTTTCGGTTATCTTGTGGGAAGGATGATTTTGGCACACTTATGTGATGAACCTAAGGGTCTGAAAACTGGGATGTGCATGTCCCTCATGTTTCTCCCATTGGCCATTGCAAATGTACTTGCATCCAGGCTAAATGATGGGGTTCCTTTAGTAGATGAGAGACTAGTTCTTCTTGGTTACTGTGCATTTTCAGTGACACTATACTTGCATTTTGCGACATCAGTCATTCATGAAATTACCAATGCCCTGGGAATATATTGTTTCAGGATAACTAGGAAGGAAGCTTGA >Glyma02g14211.2 sequence type=CDS gene model=Glyma02g14211 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGGATATATTGGGGCTCATGGTGTTGCAGCTCTGCACAGATATAAATATAGTGGAGTAGATCATTCCTACGTGGCCAAATATGTACTACAACCCTTTTGGAGTCGCTTTGTTAATTTTTTCCCCCTATGGATGCCTCCAAACATGATAACTCTTATGGGATTTATGTTCTTACTAGTGTCTGCATTGCTTGGTTATATATACTCCCCACAATTGGACACACCTCCTCCAAGATGGGTTCATTTTGCTCATGGACTACTTCTGTTTTTATACCAGACATTTGATGCTGTTGACGGGAAGCAAGCTAGACGAACAAATTCCTCAAGCCCATTGGGGGAGCTCTTTGATCATGGGTGTGACGCACTTGCTTGCACATTTGAAGCATTGGCTTTTGGGAGCACAGCCATGTGTGGAAGAAATACTTTCTGGTGGTGGTTAATATCTGCAATTACATTTTATGGTGCAACCTGGGAGCACTATTTCACCAATACACTTATACTGCCTGTTATAAATGGGCCTACAGAGGGTCTTATGATAATATACATCTGTCACTTTTTCACTGCTATCGTGGGTGCTGAGTGGTGGGTTCAGCAATTTGGGAAGTCTTTGCCATTTTTAAATTGGCTTCCTTATCTTGCGGGAATCCCAACATTCAAAGCTATATTGTGTCTAATGATAGCTTTTGGTGTTACACCAACAGTCACATGCAATGTTAGTAATGTTTATAAGGTTGTGAAGGCAAAGAACGGAAGCATGCCACTTGCATTGGCAATGCTTTACCCATTTGTTGTACTCGTGGGAGGAGTGCTTGTGTGGGATTATTTGTCGCCATTAGACATCATGGGTAGATATCCACATTTAGTTGTCATAGGAACTGGACTTACTTTCGGTTATCTTGTGGGAAGGATGATTTTGGCACACTTATGTGATGAACCTAAGGGTCTGAAAACTGGGATGTGCATGTCCCTCATGTTTCTCCCATTGGCCATTGCAAATGTACTTGCATCCAGGCTAAATGATGGGGTTCCTTTAGTAGATGAGAGACTAGTTCTTCTTGGTTACTGTGCATTTTCAGTGACACTATACTTGCATTTTGCGACATCAGTCATTCATGAAATTACCAATGCCCTGGGAATATATTGTTTCAGGATAACTAGGAAGGAAGCTTGA
>Glyma02g14211.1 sequence type=predicted peptide gene model=Glyma02g14211 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MGYIGAHGVAALHRYKYSGVDHSYVAKYVLQPFWSRFVNFFPLWMPPNMITLMGFMFLLVSALLGYIYSPQLDTPPPRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACTFEALAFGSTAMCGRNTFWWWLISAITFYGATWEHYFTNTLILPVINGPTEGLMIIYICHFFTAIVGAEWWVQQFGKSLPFLNWLPYLAGIPTFKAILCLMIAFGVTPTVTCNVSNVYKVVKAKNGSMPLALAMLYPFVVLVGGVLVWDYLSPLDIMGRYPHLVVIGTGLTFGYLVGRMILAHLCDEPKGLKTGMCMSLMFLPLAIANVLASRLNDGVPLVDERLVLLGYCAFSVTLYLHFATSVIHEITNALGIYCFRITRKEA* >Glyma02g14211.2 sequence type=predicted peptide gene model=Glyma02g14211 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MGYIGAHGVAALHRYKYSGVDHSYVAKYVLQPFWSRFVNFFPLWMPPNMITLMGFMFLLVSALLGYIYSPQLDTPPPRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACTFEALAFGSTAMCGRNTFWWWLISAITFYGATWEHYFTNTLILPVINGPTEGLMIIYICHFFTAIVGAEWWVQQFGKSLPFLNWLPYLAGIPTFKAILCLMIAFGVTPTVTCNVSNVYKVVKAKNGSMPLALAMLYPFVVLVGGVLVWDYLSPLDIMGRYPHLVVIGTGLTFGYLVGRMILAHLCDEPKGLKTGMCMSLMFLPLAIANVLASRLNDGVPLVDERLVLLGYCAFSVTLYLHFATSVIHEITNALGIYCFRITRKEA*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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