Report for Sequence Feature Glyma02g13740
Feature Type: gene_model
Chromosome: Gm02
Start: 12070262
stop: 12071937
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma02g13740
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
UniRef100_I1JEL3 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JEL3_SOYBN
SoyBase E_val: 1.00E-78 ISS
Expression Patterns of Glyma02g13740
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma02g13740
Paralog Evidence Comments
Glyma01g09251 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma02g13740 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.02g124200 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma02g13740
Coding sequences of Glyma02g13740
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma02g13740.1 sequence type=CDS gene model=Glyma02g13740 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGCTAATCAAGAAAAGTGCTTGTGTTGTGCTTGTATTTCTTTGTGCTGCCTGTCTATCCACTGCTCGCTTGAACCCTAAAGGTGCTTCAGTTAATGATATTCCAGATATAAAGGCAAGTATTGCAACTAGTGTTACAAAGAGTACTATGGCTGCAATCGATGAAGACAACTTGAACAGACCAAGTGAGAAGCGACTTATGAGCAAATCTGGGAAGGTTATCTCTGCTCCCAATGTAGAAGCCAAAAGGAATAATGCAAGAAGCTGTTTGTCTGATGAGGTCAATGAGGATCCGTTGGCTTTCACTGCTGATTATCGTCGACCAGTGCACCATCCACCTAAGAATAATAAATGA
Predicted protein sequences of Glyma02g13740
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma02g13740.1 sequence type=predicted peptide gene model=Glyma02g13740 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVLIKKSACVVLVFLCAACLSTARLNPKGASVNDIPDIKASIATSVTKSTMAAIDEDNLNRPSEKRLMSKSGKVISAPNVEAKRNNARSCLSDEVNEDPLAFTADYRRPVHHPPKNNK*