|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G68410 | AT | Annotation by Michelle Graham. TAIR10: Protein phosphatase 2C family protein | chr1:25650262-25652255 REVERSE LENGTH=436 | SoyBase | E_val: 2.00E-22 | ISS |
GO:0005575 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cellular component | SoyBase | N/A | ISS |
GO:0003824 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: catalytic activity | SoyBase | N/A | ISS |
GO:0004722 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine phosphatase activity | SoyBase | N/A | ISS |
PTHR25483 | Panther | FAMILY NOT NAMED | JGI | ISS | |
PTHR25483:SF25 | Panther | JGI | ISS | ||
UniRef100_B9SLZ1 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Protein phosphatase, putative n=1 Tax=Ricinus communis RepID=B9SLZ1_RICCO | SoyBase | E_val: 6.00E-25 | ISS |
UniRef100_B9SLZ1 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Protein phosphatase, putative n=1 Tax=Ricinus communis RepID=B9SLZ1_RICCO | SoyBase | E_val: 6.00E-25 | ISS |
Glyma02g13036 not represented in the dataset |
Glyma02g13036 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.02g116800 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma02g13036.1 sequence type=CDS gene model=Glyma02g13036 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGACAACTCAGGTCCAATCAACATCTGGCATTTTCGTATGTGCTATGTACCAGGTTTGCCTTCCATCAAGCGAGGGCATCTCTGTCCATGCAGATTCTATTTTCTTGACCTGGTCGAAGCCATGGCAAGGTCCTTTTCTATGTGCTGATTGTCACAACAAGAATGATACTGTAGAAGGAAAACTCCCTAGTGGAGTTAGAGTAGGCCTATTGTTTATGTCCTTATTCTTTTTGCAACAGATGTATATGTGA
>Glyma02g13036.1 sequence type=predicted peptide gene model=Glyma02g13036 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MTTQVQSTSGIFVCAMYQVCLPSSEGISVHADSIFLTWSKPWQGPFLCADCHNKNDTVEGKLPSGVRVGLLFMSLFFLQQMYM*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||