Report for Sequence Feature Glyma02g11370
Feature Type: gene_model
Chromosome: Gm02
Start: 9568139
stop: 9578530
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma02g11370
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G61170 AT
Annotation by Michelle Graham. TAIR10: Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:22638691-22641237 REVERSE LENGTH=783
SoyBase E_val: 0 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
PTHR24015 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24015:SF95 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF01535 PFAM
PPR repeat
JGI ISS
UniRef100_G7L1H0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Pentatricopeptide repeat-containing protein n=1 Tax=Medicago truncatula RepID=G7L1H0_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1JDZ4 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1JDZ4_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma02g11370
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma02g11370 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.02g102000 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma02g11370
Coding sequences of Glyma02g11370
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma02g11370.2 sequence type=CDS gene model=Glyma02g11370 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAGACTCTGATGATACAGGGGTGCAACAAGTGGTTATGCACAAGTTGGACTCAAAAGTCAAAAGTCGTAGCCTTTTCTTACAACCCATGTTACCCATTTAAGCTTATGTCATTTCTTCGTTCTATCCACACCAGCATTGCTGATTCCTATCAATCTATATTTCACTCCAATCAGCTTCTTAATGGGTTGTCAAAATCTGGCCAAATTGACGATGCCCGAGAATTGTTTGATAAAATGCTTCAAAGGGATGAGTATACATGGAACACCATGGTATCTGGTTATGCTAATGTGGGAAGATTGGTTGAAGCAAGAGAGCTTTTTAATGGGTTTTCAAGTAGAAGTTCTATCACTTGGTCCTCCCTCATATCCGGGTATTGTAGATTTGGGCGTCAAGCTGAGGCTTTTGATTTGTTTAAGAGGATGAGGTTGGAGGGTCAGAAACCTAGTCAGTACACTTTAGGAAGTATCCTGAGGGGGTGTTCAGCGTTGGGTTTGATACAAAAGGGGGAAATGATTCATGGGTATGTGGTGAAGAATGGATTTGAATCAAATGTGTATGTTGTCGCTGGCCTTGTTGATATGTATGCAAAGTGCAGGCACATTTCGGAAGCTGAGATTCTCTTCAAGGGGTTGGCCTTCAACAAGGGAAATCATGTCCTGTGGACCGCCATGGTTACTGGTTATGCTCAAAATGGTGATGACCATAAGGCAATTGAGTTTTTTCGTTACATGCACACAGAAGGGGTTGAGTCTAATCAGTTTACATTTCCTAGCATATTGACAGCGTGCTCTTCAGTTTCAGCTCATTGTTTTGGAGAACAGGTGCATGGTTGCATTGTACGGAATGGTTTTGGATGCAATGCATATGTTCAGAGTGCGTTGGTTGATATGTATGCCAAATGTGGAGATTTAGGTAGTGCAAAAAGGGTATTAGAAAATATGGAGGATGATGATGTTGTTTCATGGAACTCCATGATAGTTGGGTGTGTAAGACATGGATTTGAAGAGGAAGCTATTCTCTTGTTTAAAAAAATGCATGCAAGAAATATGAAGATTGATCATTATACATTTCCATCTGTTCTGAATTGTTGCATAGTAGGTAGAATTGATGGTAAATCTGTTCACTGTTTGGTAATCAAAACTGGATTTGAGAACTATAAGCTTGTTAGCAATGCTCTTGTTGATATGTATGCCAAAACTGAAGACTTGAATTGTGCATATGCTGTGTTTGAAAAGATGTTTGAGAAAGATGTCATCTCATGGACCTCCCTTGTCACAGGTTATACACAAAATGGCTCCCATGAAGAATCCCTGAAGACTTTTTGTGACATGAGAATTTCCGGGGTAAGTCCAGACCAATTTATTGTTGCCAGCATTTTGAGTGCTTGCGCAGAATTGACTCTTCTGGAATTCGGTAAACAAGTGCATTCTGACTTCATTAAATTAGGTCTAAGATCATCCCTGTCGGTGAATAATTCTCTTGTAACCATGTATGCAAAATGTGGATGCCTGGATGATGCTGATGCAATTTTTGTTTCAATGCATGTTCGGGATGTAATTACTTGGACAGCTCTTATTGTTGGTTATGCACGGAATGGCAAGGGAAGAGACTCCTTAAAATTCTATGATGCTATGGTTTCAAGTGGCACAAAACCAGATTTTATTACATTTATAGGATTATTATTTGCTTGTAGTCATGCTGGTCTTGTGGATGAAGGTCGTACATATTTTCAACAAATGAAAAAGATTTATGGAATAGAACCTGGCCCTGAACACTACGCCTGCATGATTGATCTGTTTGGACGCTTAGGAAAACTTGACGAGGCAAAAGAAATACTAAATCAAATGGATGTGAAACCTGATGCAACTGTATGGAAGGCACTCCTTGCTGCATGTAGAGTGCATGGTAACTTAGAATTGGGAGAGAGGGCAGCTACAAATCTTTTTGAGTTGGAACCCATGAATGCTATGCCTTATGTTATGTTGTCTAACATGTATTTGGCAGCTCGAAAATGGGATGATGCTGCGAAAATACGAAGGTTGATGAAATCAAAAGGCATAACAAAGGAGCCTGGATGCAGTTGGATTGAGATGAACAGCAGACTGCATACATTCATTTCTGAAGATAGAGGACATCCAAGGGAAGCTGAGATTTATTCCAAGATCGATGAAATTATAAGAAGAATTAAGGAAGTTGGTTATGTTCCAGATATGAATTTTTCATTGCATGACATGGATAGAGAGGGAAAGGAGGCTGGTCTTGCTTATCACAGTGAGAAACTGGCTGTTGCTTTTGGATTACTTGCTTCCCCACCAGGTGCACCAATTCGGATATTTAAGAATCTTAGAGTTTGTGGAGATTGTCATTCTGCCATGAAATATATATCAGGAGTTTTCACTCGTCATATCATATTGAGGGATTCAAACTGTTTTCATCATTTTAAAGAAGGAGAATGTTCATGTGAGGATTACTGGTACCCTCGAACCCTCACTGTCGCTCTCGTGCCTCCACTGTTGCGAACTCCACCATGTCTGCCACTCCGCCTGCTGCCCTCTCCGTGA
Predicted protein sequences of Glyma02g11370
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma02g11370.2 sequence type=predicted peptide gene model=Glyma02g11370 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKTLMIQGCNKWLCTSWTQKSKVVAFSYNPCYPFKLMSFLRSIHTSIADSYQSIFHSNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCIVGRIDGKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKFYDAMVSSGTKPDFITFIGLLFACSHAGLVDEGRTYFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAACRVHGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIRRLMKSKGITKEPGCSWIEMNSRLHTFISEDRGHPREAEIYSKIDEIIRRIKEVGYVPDMNFSLHDMDREGKEAGLAYHSEKLAVAFGLLASPPGAPIRIFKNLRVCGDCHSAMKYISGVFTRHIILRDSNCFHHFKEGECSCEDYWYPRTLTVALVPPLLRTPPCLPLRLLPSP*