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Integrating Genetics and Genomics to Advance Soybean Research


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Report for Sequence Feature Glyma02g10950

Feature Type:gene_model
Chromosome:Gm02
Start:9107753
stop:9107977
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma02g10950
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G67265AT Annotation by Michelle Graham. TAIR10: ROTUNDIFOLIA like 21 | chr1:25175982-25176104 REVERSE LENGTH=40 SoyBaseE_val: 1.00E-13ISS
PF08137PFAM DVL family JGI ISS
UniRef100_I1JDW1UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1JDW1_SOYBN SoyBaseE_val: 1.00E-47ISS
UniRef100_Q6X5U0UniRef Annotation by Michelle Graham. Most informative UniRef hit: DVL3 n=1 Tax=Arabidopsis thaliana RepID=Q6X5U0_ARATH SoyBaseE_val: 5.00E-11ISS

Expression Patterns of Glyma02g10950
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma02g10950 not represented in the dataset
Glyma02g10950 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g10950 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.02g099000 Wm82.a2.v1IGC As supplied by JGI

References for Glyma02g10950
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma02g10950
>Glyma02g10950.1   sequence type=CDS   gene model=Glyma02g10950   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGCAAAGATTTCATGAGAGTTTCAAAGAAGAAAGTTTCATGCAGAAGGCTTGGAGGGAACCTCAAAGAGCAAAAAGGAAGACTATACATAATTAGAAGATGTGTAGTCATGCTTCTCTATTGGCATGACTACAATCATTCTCATCAACAAGAATTGTTTACATTCTTGTTTGCAGCTCATCATATCATGGATGACCACACTCTAGAGTCCTCAAAGTCATAG
Predicted protein sequences of Glyma02g10950
>Glyma02g10950.1   sequence type=predicted peptide   gene model=Glyma02g10950   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSKDFMRVSKKKVSCRRLGGNLKEQKGRLYIIRRCVVMLLYWHDYNHSHQQELFTFLFAAHHIMDDHTLESSKS*






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