Report for Sequence Feature Glyma02g10730
Feature Type: gene_model
Chromosome: Gm02
Start: 8621113
stop: 8624276
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma02g10730
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G13100 AT
Annotation by Michelle Graham. TAIR10: unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:4156789-4158235 FORWARD LENGTH=354
SoyBase E_val: 3.00E-167 ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
UniRef100_I1JDU1 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JDU1_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q9FYA0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: AT5g13100/T19L5_60 n=1 Tax=Arabidopsis thaliana RepID=Q9FYA0_ARATH
SoyBase E_val: 1.00E-164 ISS
Expression Patterns of Glyma02g10730
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma02g10730
Paralog Evidence Comments
Glyma18g52095 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma02g10730 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.02g097000 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma02g10730
Coding sequences of Glyma02g10730
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma02g10730.1 sequence type=CDS gene model=Glyma02g10730 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGGAAGCTTCTCTGCGACTCAACCACCGTCGCCGAACCATTCCAAGGTTCGCCCCCGGCTGCGCTTCCGTGGCGGGATCCCAAACCAGAACCTATCGGAACCGTAGATCTCGTCGTTTCGGCCAACGTCGGTGGCGGGCCCTTCGCCGGCGGCGGCTGGGAAGAGGTCGTCGGTCTGGAGGAGCAGCAGCGGCGCCACCTCCAGAGGCTCCACGCCAAGGGAGTGCTCTGGAAGCCTCCGCCCGAGGAGGAGGACTCGTCGTCGTCGCCGCCGCCGTCTTCCTCCGCCCTCAGATCTGTTGTCTTCCGGCTCTCTCACGGCGGCGAGGTCTCCGCCGACGGAAACTGCCTGTTCACGGCGTCGCGGAAGGCGATGAGCGGCGAGGACGTGGACGCGCGCGAGCTGCGGCGGCGGACGGTGGCGCGGTTCTTGGAGGATCTCGGATCTGTGAGTTTTGAGGAGAGAGAAGCAATCGACGACGCGATTCGGCACATGTACTCGCCGGATCTGAAGAACGGTTGGGGGATTCATGTCGTTCAGGAGGTGAAGTTGTTGGCGAAGAAGGAGGATCGATTCGCTCTTGATTCGGCCATCGAAGAGCTTGTTCACCTCGGCATGCAAAGAGAAATGGCGGCGGAGTCTATTTACAAAGAGAGATGTGTTCCTGTGAATGATGGTCCAAGTTGGGCCAAATACATGTTGATCTCTGGTTCTCCTGATGATGAATATGATATCATCACTTTGCAATATACTGAGGAGGGTTTATTATCTGTAGATGAGAATAGAGAGGGTCGTGCTGCAGCTTTCGGTGATGATATTGCAATTGAATGCCTTGCTACAGAGTTCAAGAGAGAGATATATGTGGTGCAAGCACATGGTTCAGATGCCATGGTCGATGAAGAAAATTGTGTTTTCTTCCTTCCACATCGTCCAAGGAGCCGAATTAATGAACCTCCTTTTTTCCTTTTCATGAAAGGAACAGGTTGGTGCGGTGCTGGAGCTGACCACTATGAGCCCCTGATTGCTCATCCTTCCGCGTTTGGTTCCCAAGAAAAGGTTGCTGTGGTACTGTGA
Predicted protein sequences of Glyma02g10730
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma02g10730.1 sequence type=predicted peptide gene model=Glyma02g10730 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGKLLCDSTTVAEPFQGSPPAALPWRDPKPEPIGTVDLVVSANVGGGPFAGGGWEEVVGLEEQQRRHLQRLHAKGVLWKPPPEEEDSSSSPPPSSSALRSVVFRLSHGGEVSADGNCLFTASRKAMSGEDVDARELRRRTVARFLEDLGSVSFEEREAIDDAIRHMYSPDLKNGWGIHVVQEVKLLAKKEDRFALDSAIEELVHLGMQREMAAESIYKERCVPVNDGPSWAKYMLISGSPDDEYDIITLQYTEEGLLSVDENREGRAAAFGDDIAIECLATEFKREIYVVQAHGSDAMVDEENCVFFLPHRPRSRINEPPFFLFMKGTGWCGAGADHYEPLIAHPSAFGSQEKVAVVL*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
