Report for Sequence Feature Glyma02g10360
Feature Type: gene_model
Chromosome: Gm02
Start: 8231730
stop: 8240219
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma02g10360
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G42010 AT
Annotation by Michelle Graham. TAIR10: phospholipase D beta 1 | chr2:17533018-17537990 REVERSE LENGTH=1083
SoyBase E_val: 0 ISS
GO:0008152 GO-bp
Annotation by Michelle Graham. GO Biological Process: metabolic process
SoyBase N/A ISS
GO:0009816 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response to bacterium, incompatible interaction
SoyBase N/A ISS
GO:0046686 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to cadmium ion
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0009506 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma
SoyBase N/A ISS
GO:0003824 GO-mf
Annotation by Michelle Graham. GO Molecular Function: catalytic activity
SoyBase N/A ISS
GO:0004630 GO-mf
Annotation by Michelle Graham. GO Molecular Function: phospholipase D activity
SoyBase N/A ISS
GO:0005515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein binding
SoyBase N/A ISS
GO:0005546 GO-mf
Annotation by Michelle Graham. GO Molecular Function: phosphatidylinositol-4,5-bisphosphate binding
SoyBase N/A ISS
KOG1329
KOG
Phospholipase D1
JGI ISS
PTHR18896 Panther
PHOSPHOLIPASE D
JGI ISS
PTHR18896:SF33 Panther
PLDGAMMA1 (MATERNAL EFFECT EMBRYO ARREST 54), PHOS
JGI ISS
PF00168 PFAM
C2 domain
JGI ISS
PF00614 PFAM
Phospholipase D Active site motif
JGI ISS
PF12357 PFAM
Phospholipase D C terminal
JGI ISS
UniRef100_G7L1G0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Phospholipase D n=1 Tax=Medicago truncatula RepID=G7L1G0_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI0002337681 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI0002337681 related cluster n=1 Tax=unknown RepID=UPI0002337681
SoyBase E_val: 0 ISS
Expression Patterns of Glyma02g10360
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma02g10360
Paralog Evidence Comments
Glyma18g52560 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma02g10360 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.02g093500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma02g10360
Coding sequences of Glyma02g10360
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma02g10360.1 sequence type=CDS gene model=Glyma02g10360 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGATAATTATGGATCATCTTCTCCTTACCGGTATCCAAGCCCATATATGTACCCTCCCAATCCTCATCAACCGTACCCTCCTCCTCCAGGTTCAGCTCCTGATCCATATGCACAGCATGTTCCTTATCAACCATATCCTTACCTTTCTTCACATTCCTTCAACTATTCCTATCCTCCACCTCCTAGACCTTCCTCACATTCTGGCCATTTTGAGTATTCCTATACTCCTCCTCCTCACCCTTCTGATTTTCCCTACCCCCCTCCACCTTATTATGCTCATCCTCCATCTTATCCTTATCCCTACCATGTTCCTCCACCAAATCATGATCCTTCCAAGCCTTCCCTTTCATACCATGCTAGTTTCCAACATGGATCATCTCATTATTATTATCAACAACCAAACCAGGCCTATTCAGCTTCGGCTCCTGAAGTCCAACCTGATATCCACTCGCACACCAATAGCTACTCTGGTCCCTACTGGCAGGAGAACACAAGCACTGCAGCAGATGAAGTGTCACAAGCTAGTGATAGTTCCAAGCCTTCTCAGGGTTCTGCTTACCCGCCTTTGGATGATCTTATGAGCAATGTTCGGTTGTCTGATGGCCAGCCAACTGCTCCTGCATCGCCACCTGCACCTGCAAGGCAACCATTTATGCATTCCATTTCAGTTCCAAAGTTGCAACAGAAGAGAGAGGAATTTTATGGATATTCGAATAACTCCTTCTCGGGGTGGGGATCCTCCTACCACAGTCAGGTGGATTCGTCTAGGCTTTCTGATTTTTCTGGCTCATTTAATGAATCAATGCATAGTCAGAGTTTGCAGATTGTTCCAGTGCAGAATAAAGGGTCCTTGAGAGTTTTGCTGCTACATGGAAATTTAGATATATGGATCCATGAAGCCAAGAACCTTCCAAATATGGACATGTTTCACAAAACATTAGGAGATATGTTTGGTAAATTACCTGGTAGTGTGGGCAATAAAATTGAAGGAACTATGAATAAGAAGATTACTAGTGATCCTTATGTATCAATTTCAGTATCCAATGCTGTTATTGGGAGGACTTACGTCATTAGCAACTCCGAAAATCCTGTTTGGTTGCAACATTTCTATGTTCCTGTTGCGTATCATGCTGCTGAAGTGCACTTTCTTGTTAAAGACAACGATATTGTGGGTTCACAGCTCATTGGCATTGTGGCAATTCCAGTGGAGCAAATATACTCAGGAGCAGTAGTTGAAGGAACCTTTCCTATCCTGAATAATAATGGGAAGCCTTGTAAGCAAGGTGCTGTCCTGACCCTATCCATTCAGTACATACCTATGGAGAAATTGAGCATTTATCACCAAGGAGTTGGAGCAGGGCCAGAATACATTGGGGTTCCTGGCACATATTTTCCTTTGAGGAGGGGTGGAACCGTTACTCTGTACCAAGATGCTCATGTTCCAGATGGCAGCCTCCCTAATGTGTTGCTTGACAGTGGGATGTATTATGTGAATGGAAAGTGTTGGCAAGATATCTTTGATTCCATAAGTCAAGCTCGGCGTTTGATTTATATTACAGGATGGTCTGTGTGGCACAAAGTAAGGTTGGTTAGGGATGCTGCTGGTTATGCTTCAGATTATACCTTGGGTGATCTTGTAAAGTCAAAGTCACAGGAAGGAGTAAGAGTTCTTCTCCTTATCTGGGATGATCCTACGTCAAGAAGCATTTTTGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACTCGTAGATTTTTTAAGCACTCTTCAGTGCAAGTGCTTCTTTGTCCTCGCAGTGGCAAACGACATAGCTGGATCAAGCAAAAGGAAGTTGGAACGATATATACACATCATCAGAAAACCGTGATTGTGGATGCTGATGCTGGAAATAATAGAAGAAAAATTATAGCATTTGTTGGTGGACTTGATTTGTGTGATGGGCGATATGATACTCCCCACCATCCTCTTTTTAGAACATTGAATACAATACATAAGGATGACTACCACAACCCTACTTTTACGGGTAATATTGGTGGTTGTCCGCGGGAGCCATGGCATGATTTGCATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTAACTAACTTTGAGGAGCGCTGGTTAAAAGCTTCGAAACCTCACGGGATTAAAAAGTTGAAAATTTCATATGATGATGCTTTGCTAAGGCTGGAAAGAATTCCAGATGTTATTGGCATCAATGATGCTCCAAGTGTTGGTGAAGATAATCCTGAAGTTTGGCATGTTCAGATATTTCGTTCAATTGATTCAAATTCCGTTAAGGGGTTTCCAAAGGATCCAAAAGATGCAACGAGCAAGAACCTAGTTTGTGGAAAGAATGTGCTGATTGACATGAGCATACATACAGCATATGTTAAGGCCATTCGTGCTGCACAACATTACATTTATATAGAGAATCAATATTTCATCGGTTCTTCTTACAATTGGAGTCAACATAAAGACCTAGGTGCTAATAACTTAATCCCAATGGAAATTGCTCTAAAGATTGCTGAAAAGATAAAAGCAAACGAGAGATTTGCAGTGTATGTTGTTATTCCAATGTGGCCAGAAGGTGTTCCAACAGGGGCTGCCACACAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGCAGGGCTTGAAGCTGCATTTTCTCCACAAGATTATTTGAACTTTTTCTGTCTTGGTAATCGAGAGGCCATGAATTTGTATGATAATGCCGGTGTGACTGGAGCTCCTCCCCCAGCAAATAGTCCACAAGCAGCCAGCCGAAATAGCCAACGCTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGGTCTGCAAACATCAACCAACGCTCCATGGAAGGAACAAGGGACAGTGAGATTGCAATGGGAGCTTATCAACCTCATCATACGTGGGCAAGAAAACAATCTTATCCACATGGACAAATCCATGGATATAGGATGTCACTTTGGGCAGAACATACAGGAACAATTGAAGAGTGCTTTTTGCAACCCGAGAGCCTTGAATGTGTAAGAAGGGTTAAAGCAATGGGTGAAATGAACTGGAAACAATTTTCAGCTAAGGAAGCAACAGAGATGAAAGGGCATCTACTGAAATACCCGGTAGAAGTTGATCGAAATGGCAAGGTTAGACCCCTTCAGGACTGTGAAGAGTTCCCGGATGTGGGAGGAAAAATAGTTGGATCTTTTCTTGCTATGAAGGAGAACCTAACCATTTGA
Predicted protein sequences of Glyma02g10360
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma02g10360.1 sequence type=predicted peptide gene model=Glyma02g10360 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MDNYGSSSPYRYPSPYMYPPNPHQPYPPPPGSAPDPYAQHVPYQPYPYLSSHSFNYSYPPPPRPSSHSGHFEYSYTPPPHPSDFPYPPPPYYAHPPSYPYPYHVPPPNHDPSKPSLSYHASFQHGSSHYYYQQPNQAYSASAPEVQPDIHSHTNSYSGPYWQENTSTAADEVSQASDSSKPSQGSAYPPLDDLMSNVRLSDGQPTAPASPPAPARQPFMHSISVPKLQQKREEFYGYSNNSFSGWGSSYHSQVDSSRLSDFSGSFNESMHSQSLQIVPVQNKGSLRVLLLHGNLDIWIHEAKNLPNMDMFHKTLGDMFGKLPGSVGNKIEGTMNKKITSDPYVSISVSNAVIGRTYVISNSENPVWLQHFYVPVAYHAAEVHFLVKDNDIVGSQLIGIVAIPVEQIYSGAVVEGTFPILNNNGKPCKQGAVLTLSIQYIPMEKLSIYHQGVGAGPEYIGVPGTYFPLRRGGTVTLYQDAHVPDGSLPNVLLDSGMYYVNGKCWQDIFDSISQARRLIYITGWSVWHKVRLVRDAAGYASDYTLGDLVKSKSQEGVRVLLLIWDDPTSRSIFGYKTDGVMATHDEETRRFFKHSSVQVLLCPRSGKRHSWIKQKEVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPHHPLFRTLNTIHKDDYHNPTFTGNIGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPDVIGINDAPSVGEDNPEVWHVQIFRSIDSNSVKGFPKDPKDATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYVVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEAGLEAAFSPQDYLNFFCLGNREAMNLYDNAGVTGAPPPANSPQAASRNSQRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHHTWARKQSYPHGQIHGYRMSLWAEHTGTIEECFLQPESLECVRRVKAMGEMNWKQFSAKEATEMKGHLLKYPVEVDRNGKVRPLQDCEEFPDVGGKIVGSFLAMKENLTI*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
