|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G21610 | AT | Annotation by Michelle Graham. TAIR10: pectinesterase 11 | chr2:9245161-9247025 REVERSE LENGTH=352 | SoyBase | E_val: 4.00E-45 | ISS |
GO:0006499 | GO-bp | Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation | SoyBase | N/A | ISS |
GO:0042545 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cell wall modification | SoyBase | N/A | ISS |
GO:0005618 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cell wall | SoyBase | N/A | ISS |
GO:0009505 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plant-type cell wall | SoyBase | N/A | ISS |
GO:0030599 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: pectinesterase activity | SoyBase | N/A | ISS |
PF01095 | PFAM | Pectinesterase | JGI | ISS | |
UniRef100_B9RWI7 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RWI7_RICCO | SoyBase | E_val: 1.00E-85 | ISS |
UniRef100_UPI0002337588 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI0002337588 related cluster n=1 Tax=unknown RepID=UPI0002337588 | SoyBase | E_val: 7.00E-179 | ISS |
Glyma02g09535 not represented in the dataset |
Glyma02g09535 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.02g086800 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma02g09535.1 sequence type=CDS gene model=Glyma02g09535 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GAGTTGAACTTCTCAGCTCTCAAAAAACTTGTGTTTTCTCTCGCGATCACCATGTATCTTGGTTGGTATCTTTTGACATTTTTCTTTTTTTTGACGAGTGTTAAAATAGTGTTAGTGCATGCTAATCACAATCATCATCACCATCATCATCACGAACAAAGAAACAATAAACAAATTGCAAACAAAACATCCCATTCTTCTTCCGGGACAATTATTGTGGACTTATCGGGGAATGGAGACTTCTCTACGATACAATCTGCTATTGATTCAATTTCTTCTGACAACAAGAATTGGGTTTATATCTATGTGAAGGCAGGCACCTACAGGGAAAAGGTGAAGATCAGTTTTGACAAGCCTTTCATCGTACTAGAAGGCGAGGGACAAAAGAACACTTTTGTTGAGTGGGATGACCATGATTCAAGTGCAGAGAGTCCTACGTTCACAACCATGGCTGACAATGTTGTCGTCAAGTCCATTAGCTTTAGGGACTGTACCATATCCGCTATTGATGCTAATCTTGGTCCTGGCATTATTGGTTTTATCACCGCACAAGGGAGAACAGATCCAAACGATTCAAATGGGTTTGTTTTTAAGCAATGCAATATCATTGGAAATGGTACAACTTACTTGGGAAGACCATGGAGAGGTTATGCTAGAGTTATTTTCTATAATACTAAAATGTCCAACATTATACAACCATTAGGTTGGCAGCCATGGGGCTTCGCTGGCCAAGAGGATCACATAACATTCGCTGAGTATGGGAATTCTGGACCTGGTTCTGACACTTCCAAGCGAGTAAGTTGGTTAAAGAATTTGGATTCATCAACCGTTAGTAAGATGGCAAGTACTAGCTTCATTGGCACCGATGGTTGGCTAAAGACCCTGACGCAGCTCTAA
>Glyma02g09535.1 sequence type=predicted peptide gene model=Glyma02g09535 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ELNFSALKKLVFSLAITMYLGWYLLTFFFFLTSVKIVLVHANHNHHHHHHHEQRNNKQIANKTSHSSSGTIIVDLSGNGDFSTIQSAIDSISSDNKNWVYIYVKAGTYREKVKISFDKPFIVLEGEGQKNTFVEWDDHDSSAESPTFTTMADNVVVKSISFRDCTISAIDANLGPGIIGFITAQGRTDPNDSNGFVFKQCNIIGNGTTYLGRPWRGYARVIFYNTKMSNIIQPLGWQPWGFAGQEDHITFAEYGNSGPGSDTSKRVSWLKNLDSSTVSKMASTSFIGTDGWLKTLTQL*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||