|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G22770 | AT | Annotation by Michelle Graham. TAIR10: gigantea protein (GI) | chr1:8062398-8067447 FORWARD LENGTH=1173 | SoyBase | E_val: 3.00E-30 | ISS |
GO:0005982 | GO-bp | Annotation by Michelle Graham. GO Biological Process: starch metabolic process | SoyBase | N/A | ISS |
GO:0006355 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent | SoyBase | N/A | ISS |
GO:0007623 | GO-bp | Annotation by Michelle Graham. GO Biological Process: circadian rhythm | SoyBase | N/A | ISS |
GO:0009409 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to cold | SoyBase | N/A | ISS |
GO:0009637 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to blue light | SoyBase | N/A | ISS |
GO:0009639 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to red or far red light | SoyBase | N/A | ISS |
GO:0009908 | GO-bp | Annotation by Michelle Graham. GO Biological Process: flower development | SoyBase | N/A | ISS |
GO:0010218 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to far red light | SoyBase | N/A | ISS |
GO:0010378 | GO-bp | Annotation by Michelle Graham. GO Biological Process: temperature compensation of the circadian clock | SoyBase | N/A | ISS |
GO:0042542 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to hydrogen peroxide | SoyBase | N/A | ISS |
GO:0042752 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of circadian rhythm | SoyBase | N/A | ISS |
GO:0048574 | GO-bp | Annotation by Michelle Graham. GO Biological Process: long-day photoperiodism, flowering | SoyBase | N/A | ISS |
GO:0048578 | GO-bp | Annotation by Michelle Graham. GO Biological Process: positive regulation of long-day photoperiodism, flowering | SoyBase | N/A | ISS |
GO:0080167 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to karrikin | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0005654 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleoplasm | SoyBase | N/A | ISS |
GO:0005515 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein binding | SoyBase | N/A | ISS |
UniRef100_E1CI63 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: GIGANTEA n=1 Tax=Glycine max RepID=E1CI63_SOYBN | SoyBase | E_val: 7.00E-41 | ISS |
UniRef100_I1L1I0 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L1I0_SOYBN | SoyBase | E_val: 1.00E-51 | ISS |
Glyma02g08680 not represented in the dataset |
Glyma02g08680 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma02g08680.1 sequence type=CDS gene model=Glyma02g08680 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGCAGTGTCGCCTACCAGCTACAATCAGATGCCTTTCTCATCCAAGTGCAAATGTCCGTGCTCTAAGCACTTCAGTTCTTCGTGACATTTTGCATACTAGTTCAATTGGATCGAGTCCTAAGCCACCACAAAAGAATGGCATCCATAATCAGTACTTCAATTTGGATGTCATTGACTGGCGAGCTGACGTAGAAAAATGCTCGACATGGGAAGCTCACAGCCGGCTTTCAAATGGATTGTCTATTGAATATCTTAACACAGCCGCGAATGATTTAGGCTTTGCTATTTCTATC
>Glyma02g08680.1 sequence type=predicted peptide gene model=Glyma02g08680 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MQCRLPATIRCLSHPSANVRALSTSVLRDILHTSSIGSSPKPPQKNGIHNQYFNLDVIDWRADVEKCSTWEAHSRLSNGLSIEYLNTAANDLGFAISI
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||