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Integrating Genetics and Genomics to Advance Soybean Research


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Report for Sequence Feature Glyma02g07895

Feature Type:gene_model
Chromosome:Gm02
Start:6231784
stop:6232394
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma02g07895
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G20380AT Annotation by Michelle Graham. TAIR10: Prolyl oligopeptidase family protein | chr1:7061665-7065047 FORWARD LENGTH=731 SoyBaseE_val: 3.00E-18ISS
GO:0006508GO-bp Annotation by Michelle Graham. GO Biological Process: proteolysis SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0004252GO-mf Annotation by Michelle Graham. GO Molecular Function: serine-type endopeptidase activity SoyBaseN/AISS
GO:0008236GO-mf Annotation by Michelle Graham. GO Molecular Function: serine-type peptidase activity SoyBaseN/AISS
GO:0070008GO-mf Annotation by Michelle Graham. GO Molecular Function: serine-type exopeptidase activity SoyBaseN/AISS
PTHR11757Panther PROTEASE FAMILY S9A OLIGOPEPTIDASE JGI ISS
PTHR11757:SF2Panther PROLYL ENDOPEPTIDASE (PROLYL OLIGOPEPTIDASE) JGI ISS
UniRef100_B9R8I0UniRef Annotation by Michelle Graham. Most informative UniRef hit: Prolyl endopeptidase, putative n=1 Tax=Ricinus communis RepID=B9R8I0_RICCO SoyBaseE_val: 9.00E-17ISS
UniRef100_I1JSY1UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JSY1_SOYBN SoyBaseE_val: 8.00E-17ISS

Expression Patterns of Glyma02g07895
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma02g07895 not represented in the dataset
Glyma02g07895 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g07895 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma02g07895
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma02g07895
>Glyma02g07895.1   sequence type=CDS   gene model=Glyma02g07895   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTGGTTGGTGTTATGGACATGTTACGGTTCCACAAATTTACAATAGGTCATGCTTGTACCACAGATTATGGTTGTTCAGACAAGGAGGAAGAATTTCATTGGCTAATCAAGTTTGTTAAACCGATCATGAAATATAATAATGATGTATATATATATATATATATATATTATAAATGCATAATTGTAGTTTCTGTAAGTATTTTATTTTAG
Predicted protein sequences of Glyma02g07895
>Glyma02g07895.1   sequence type=predicted peptide   gene model=Glyma02g07895   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLVGVMDMLRFHKFTIGHACTTDYGCSDKEEEFHWLIKFVKPIMKYNNDVYIYIYIYYKCIIVVSVSILF*






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