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Report for Sequence Feature Glyma02g07081

Feature Type:gene_model
Chromosome:Gm02
Start:5653930
stop:5654797
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma02g07081
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G07990AT Annotation by Michelle Graham. TAIR10: serine carboxypeptidase-like 27 | chr3:2552544-2554644 FORWARD LENGTH=459 SoyBaseE_val: 2.00E-37ISS
GO:0006508GO-bp Annotation by Michelle Graham. GO Biological Process: proteolysis SoyBaseN/AISS
GO:0007020GO-bp Annotation by Michelle Graham. GO Biological Process: microtubule nucleation SoyBaseN/AISS
GO:0005576GO-cc Annotation by Michelle Graham. GO Cellular Compartment: extracellular region SoyBaseN/AISS
GO:0004185GO-mf Annotation by Michelle Graham. GO Molecular Function: serine-type carboxypeptidase activity SoyBaseN/AISS
PTHR11802Panther SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE JGI ISS
PTHR11802:SF8Panther SERINE CARBOXYPEPTIDASE II (CARBOXYPEPTIDASE D) (PLANTS) JGI ISS
PF00450PFAM Serine carboxypeptidase JGI ISS
UniRef100_C6TD45UniRef Annotation by Michelle Graham. Best UniRef hit: Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6TD45_SOYBN SoyBaseE_val: 3.00E-69ISS
UniRef100_G7I9K3UniRef Annotation by Michelle Graham. Most informative UniRef hit: Serine carboxypeptidase-like protein n=1 Tax=Medicago truncatula RepID=G7I9K3_MEDTR SoyBaseE_val: 1.00E-36ISS

Expression Patterns of Glyma02g07081
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma02g07081 not represented in the dataset
Glyma02g07081 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g07081 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma02g07081
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma02g07081
>Glyma02g07081.1   sequence type=CDS   gene model=Glyma02g07081   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGTGGAGACACTGATTCAGTAGTTCCTGTAACCGCGTCTTGGTATTCAATTCGTGCCTTGAACCTATCTACCATCATCAATTGGTACGTTTGGTATGATAATGACGAGGTTGGTGGCTGGAGTCAAGTTTATGAAGGGCTTACATTGGTTACAGTAAGAGGGGCAGGGCACGAGGTTCCACTTCATAAACCCCGCCAAGGTTTTACTCTTTTTAAGTCATTCTTGGAGAACAAGAACATGCCATTGCCAATTGATAGCAAGCTTAGTGGCCCAACTCAATCACTGAACAAGAACATTCGATTGGCTAGGCCCATACGCAAGATCACTATGCCATCATCGGTGCAGGGCTTCTTTACTTATTAG
Predicted protein sequences of Glyma02g07081
>Glyma02g07081.1   sequence type=predicted peptide   gene model=Glyma02g07081   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSGDTDSVVPVTASWYSIRALNLSTIINWYVWYDNDEVGGWSQVYEGLTLVTVRGAGHEVPLHKPRQGFTLFKSFLENKNMPLPIDSKLSGPTQSLNKNIRLARPIRKITMPSSVQGFFTY*






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