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A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G31725 | AT | Annotation by Michelle Graham. TAIR10: Eukaryotic protein of unknown function (DUF842) | chr2:13486447-13487391 REVERSE LENGTH=149 | SoyBase | E_val: 5.00E-68 | ISS |
GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
GO:0005575 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cellular component | SoyBase | N/A | ISS |
GO:0003674 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: molecular function | SoyBase | N/A | ISS |
KOG3377 | KOG | Uncharacterized conserved protein | JGI | ISS | |
PTHR21096 | Panther | UNCHARACTERIZED | JGI | ISS | |
PF05811 | PFAM | Eukaryotic protein of unknown function (DUF842) | JGI | ISS | |
UniRef100_C6T4W6 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=C6T4W6_SOYBN | SoyBase | E_val: 7.00E-108 | ISS |
UniRef100_G7IYL4 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Protein FAM136A n=1 Tax=Medicago truncatula RepID=G7IYL4_MEDTR | SoyBase | E_val: 8.00E-78 | ISS |
Glyma02g06480 not represented in the dataset |
Glyma02g06480 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.02g058200 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma02g06480.4 sequence type=transcript gene model=Glyma02g06480 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GGAACTGTGTAAGAAGAGAAAGAGGACGCAGCAAGGCCGAAGCAGAGTTTCAATTCAATTCAATAGCGATTTAGAGTTTCCAGAAAAGAAATTGATTTTCAGATCTCATTGTTGACAGTCAGTATCAGATGGATCATTTTGCAGCACATGAAGAGCAACTTGCTTCACAGAGAATGAGGCAGAAACTTGAAGAAGTAAATGTGGCTGCTCAAACTAATCTTGCCCCTGTCCAAGACTATGTCAATTATACACTCCAGAAAGCATATTTTAAGTGTGCATATGAGTGCTTTGATAGAAGCAAAAGGCAGGAAGAAATAAGCAGTTGTGTCGAAAATTGCAGTATTCCTCTTTCTAATGTGCAACATACATTTGATCATGAGATGGCACAGTTTCAGGAGAGGTTGAATAGATCTCTGATGGTGTGTCAAGATAAGTACGAGGCGGCTAGGCTACAGAAGAAAAATGATGCTATGAATGATTTGGTTTCCTGTGCTGACCAGTCAATCCTGGAAAGCATCAAGACGCTGCCACATCTTGCCAACAAGTTGAAAGCTTCCTTTGGAATTAGTGACAATGGCTCCTAGTAGCACGCTTTTCTAGTGGGAAAAGACTATCATTGTCGTTATTGGTTCATTGTAGCTTTTTTCTTCTTCCATACATTTAATTTAACCCACAAGAAAATACTTGCATTGCAAACAGATCATTGATCATAAGGGTGTTTTCTCAACATGTGAGAGTTTTAGTCAACGATGGACGTTGTAATTTGCAAGAAAGTTTAGCCGCACAA >Glyma02g06480.5 sequence type=transcript gene model=Glyma02g06480 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATTTTTTTGTTATGGTAAGAAGAAGAAAACAAAAATTTAACCGAAGGTTTAAACCCTTAAAGGGCCTAAAGCCCCAAAACCCTTTGAAACGGAACTGTGTAAGAAGAGAAAGAGGACGCAGCAAGGCCGAAGCAGAGTTTCAATTCAATTCAATAGCGATTTAGAGTTTCCAGAAAAGAAATTGATTTTCAGTCAGTATCAGATGGATCATTTTGCAGCACATGAAGAGCAACTTGCTTCACAGAGAATGAGGCAGAAACTTGAAGAAGTAAATGTGGCTGCTCAAACTAATCTTGCCCCTGTCCAAGACTATGTCAATTATACACTCCAGAAAGCATATTTTAAGTGTGCATATGAGTGCTTTGATAGAAGCAAAAGGCAGGAAGAAATAAGCAGTTGTGTCGAAAATTGCAGTATTCCTCTTTCTAATGTGCAACATACATTTGATCATGAGATGGCACAGTTTCAGGAGAGGTTGAATAGATCTCTGATGGTGTGTCAAGATAAGTACGAGGCGGCTAGGCTACAGAAGAAAAATGATGCTATGAATGATTTGGTTTCCTGTGCTGACCAGTCAATCCTGGAAAGCATCAAGACGCTGCCACATCTTGCCAACAAGTTGAAAGCTTCCTTTGGAATTAGTGACAATGGCTCCTAGTAGCACGCTTTTCTAGTGGGAAAAGACTATCATTGTCGTTATTGGTTCATTGTAGCTTTTTTCTTCTTCCATACATTTAATTTAACCCACAAGAAAATACTTGCATTGCAAACAGATCATTGATCATAAGGGTGTTTTCTCAACATGTGAGAGTTTTAGTCAACGATGGACGTTGTAATTTGCAAGAAAGTTTAGCCGCACAATTCCTATCTTGACTATAGTTGCGTATGGTTAACATTCGAATACAGGGGACATCAAATGAAGGATATGTATAAACCTAGAATGCTTAAAAAGAAACAAACATATTTTTTTTAAAGACAGGGTAAAAGACACAAGTCTGTTCAACGTGAAAGCATTAATTTATTTGGTTATCTCGTCGGGATTGATTATTTATGAAAATTTGATGAATGGATTCCATCCTTAAATCTGCAGGAGGT
>Glyma02g06480.1 sequence type=CDS gene model=Glyma02g06480 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGATCATTTTGCAGCACATGAAGAGCAACTTGCTTCACAGAGAATGAGGCAGAAACTTGAAGAAGTAAATGTGGCTGCTCAAACTAATCTTGCCCCTGTCCAAGACTATGTCAATTATACACTCCAGAAAGCATATTTTAAGTGTGCATATGAGTGCTTTGATAGAAGCAAAAGGCAGGAAGAAATAAGCAGTTGTGTCGAAAATTGCAGTATTCCTCTTTCTAATGTGCAACATACATTTGATCATGAGATGGCACAGTTTCAGGAGAGGTTGAATAGATCTCTGATGGTGTGTCAAGATAAGTACGAGGCGGCTAGGCTACAGAAGAAAAATGATGCTATGAATGATTTGGTTTCCTGTGCTGACCAGTCAATCCTGGAAAGCATCAAGACGCTGCCACATCTTGCCAACAAGTTGAAAGCTTCCTTTGGAATTAGTGACAATGGCTCCTAG >Glyma02g06480.4 sequence type=CDS gene model=Glyma02g06480 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGATCATTTTGCAGCACATGAAGAGCAACTTGCTTCACAGAGAATGAGGCAGAAACTTGAAGAAGTAAATGTGGCTGCTCAAACTAATCTTGCCCCTGTCCAAGACTATGTCAATTATACACTCCAGAAAGCATATTTTAAGTGTGCATATGAGTGCTTTGATAGAAGCAAAAGGCAGGAAGAAATAAGCAGTTGTGTCGAAAATTGCAGTATTCCTCTTTCTAATGTGCAACATACATTTGATCATGAGATGGCACAGTTTCAGGAGAGGTTGAATAGATCTCTGATGGTGTGTCAAGATAAGTACGAGGCGGCTAGGCTACAGAAGAAAAATGATGCTATGAATGATTTGGTTTCCTGTGCTGACCAGTCAATCCTGGAAAGCATCAAGACGCTGCCACATCTTGCCAACAAGTTGAAAGCTTCCTTTGGAATTAGTGACAATGGCTCCTAG >Glyma02g06480.5 sequence type=CDS gene model=Glyma02g06480 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGATCATTTTGCAGCACATGAAGAGCAACTTGCTTCACAGAGAATGAGGCAGAAACTTGAAGAAGTAAATGTGGCTGCTCAAACTAATCTTGCCCCTGTCCAAGACTATGTCAATTATACACTCCAGAAAGCATATTTTAAGTGTGCATATGAGTGCTTTGATAGAAGCAAAAGGCAGGAAGAAATAAGCAGTTGTGTCGAAAATTGCAGTATTCCTCTTTCTAATGTGCAACATACATTTGATCATGAGATGGCACAGTTTCAGGAGAGGTTGAATAGATCTCTGATGGTGTGTCAAGATAAGTACGAGGCGGCTAGGCTACAGAAGAAAAATGATGCTATGAATGATTTGGTTTCCTGTGCTGACCAGTCAATCCTGGAAAGCATCAAGACGCTGCCACATCTTGCCAACAAGTTGAAAGCTTCCTTTGGAATTAGTGACAATGGCTCCTAG
>Glyma02g06480.1 sequence type=predicted peptide gene model=Glyma02g06480 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MDHFAAHEEQLASQRMRQKLEEVNVAAQTNLAPVQDYVNYTLQKAYFKCAYECFDRSKRQEEISSCVENCSIPLSNVQHTFDHEMAQFQERLNRSLMVCQDKYEAARLQKKNDAMNDLVSCADQSILESIKTLPHLANKLKASFGISDNGS* >Glyma02g06480.4 sequence type=predicted peptide gene model=Glyma02g06480 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MDHFAAHEEQLASQRMRQKLEEVNVAAQTNLAPVQDYVNYTLQKAYFKCAYECFDRSKRQEEISSCVENCSIPLSNVQHTFDHEMAQFQERLNRSLMVCQDKYEAARLQKKNDAMNDLVSCADQSILESIKTLPHLANKLKASFGISDNGS* >Glyma02g06480.5 sequence type=predicted peptide gene model=Glyma02g06480 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MDHFAAHEEQLASQRMRQKLEEVNVAAQTNLAPVQDYVNYTLQKAYFKCAYECFDRSKRQEEISSCVENCSIPLSNVQHTFDHEMAQFQERLNRSLMVCQDKYEAARLQKKNDAMNDLVSCADQSILESIKTLPHLANKLKASFGISDNGS*
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