|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G36230 | AT | Annotation by Michelle Graham. TAIR10: Aldolase-type TIM barrel family protein | chr2:15193878-15195509 REVERSE LENGTH=304 | SoyBase | E_val: 7.00E-154 | ISS |
GO:0000105 | GO-bp | Annotation by Michelle Graham. GO Biological Process: histidine biosynthetic process | SoyBase | N/A | ISS |
GO:0007020 | GO-bp | Annotation by Michelle Graham. GO Biological Process: microtubule nucleation | SoyBase | N/A | ISS |
GO:0008152 | GO-bp | Annotation by Michelle Graham. GO Biological Process: metabolic process | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0003824 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: catalytic activity | SoyBase | N/A | ISS |
GO:0003949 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | SoyBase | N/A | ISS |
KOG3055 | KOG | Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase | JGI | ISS | |
PTHR21169 | Panther | 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE | JGI | ISS | |
PF00977 | PFAM | Histidine biosynthesis protein | JGI | ISS | |
UniRef100_C6TJR8 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=C6TJR8_SOYBN | SoyBase | E_val: 0 | ISS |
UniRef100_D7LIP8 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: BBMII isomerase n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LIP8_ARALL | SoyBase | E_val: 2.00E-151 | ISS |
Glyma02g06120 not represented in the dataset |
Glyma02g06120 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma02g06120.1 sequence type=CDS gene model=Glyma02g06120 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGCGCAATCTGGCTGCACCTCATTCCTTGGGGGTTTTCATCTTTCGCCCCAATAAGCCTCCTTTTCTCACTCTCCCCTCACTCTCTCGAAGATCTCTCCCTTCCATCCAGTGCGGTGCAGTTCAATTCCGCCCCTGCATCGATATCCACAAAGGGAAAGTGAAGCAAATTGTAGGGTCCACCCTTCAAGACTTGAAAGGCTCCGATCCCGTCACCAATTTTGAGTCTGATAAGTCAGCCGCTGAATACGCCACGCTTTACAAGCAAGATGGACTCACTGGTGGTCACGTCATCATGCTTGGTGCGGATCCTTTGAGCAAAGCTGCTGCCCTTCAAGCATTGCACGCTTATCCCGGCGGTCTGCAAGTCGGAGGGGGAATAAATTCTGACAATTGTTTGAGTTACATTGAGGAAGGAGCAAGCCATGTCATTGTCACTTCTTATGTATTCAATAATGGACAAATGGATATTGGAAGGCTAAAAGATCTTGTTCAAATTGTTGGAAAAGAGAGACTTGTGTTGGATCTCAGTTGCAGAAAAAAGGATGGTAAATATGCAATTGTCACTGATAGATGGCAGAAGTTCAGTGATGTGTTTGTTGATCCTGATGTAATGGAATTTCTTGCCAACTTTGCTGATGAGTTTCTGGTTCATGGTGTTGATGTTGAAGGGAAGAAGTTGGGAATTGATGAAGAACTTGTGGCTTTGCTTGGCAAATATTCAACGATTCCTGTTACTTATGCTGGTGGTGTGACTGAAATGGCTGATCTAGAGAGGATAAGAACGGCTGGAATGGAGCGTGTGAATGTTACTGTGGGCAGTGCCTTGGATATTTTTGGGGGAAACCTGGCTTACGAAGATGTTGTAGCTTGGCATGCCCAGCAAAATGCCTCTGTAGTTTAA
>Glyma02g06120.1 sequence type=predicted peptide gene model=Glyma02g06120 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MRNLAAPHSLGVFIFRPNKPPFLTLPSLSRRSLPSIQCGAVQFRPCIDIHKGKVKQIVGSTLQDLKGSDPVTNFESDKSAAEYATLYKQDGLTGGHVIMLGADPLSKAAALQALHAYPGGLQVGGGINSDNCLSYIEEGASHVIVTSYVFNNGQMDIGRLKDLVQIVGKERLVLDLSCRKKDGKYAIVTDRWQKFSDVFVDPDVMEFLANFADEFLVHGVDVEGKKLGIDEELVALLGKYSTIPVTYAGGVTEMADLERIRTAGMERVNVTVGSALDIFGGNLAYEDVVAWHAQQNASVV*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||