Report for Sequence Feature Glyma02g02660
Feature Type: gene_model
Chromosome: Gm02
Start: 2018730
stop: 2024705
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma02g02660
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G27070 AT
Annotation by Michelle Graham. TAIR10: 5'-AMP-activated protein kinase-related | chr1:9396945-9399225 REVERSE LENGTH=532
SoyBase E_val: 9.00E-122 ISS
PTHR10343 Panther
5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT
JGI ISS
PTHR10343:SF10 Panther
5-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT
JGI ISS
UniRef100_G7K9Q9 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: 5'-AMP-activated protein kinase subunit beta-2 n=1 Tax=Medicago truncatula RepID=G7K9Q9_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI0002336C22 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI0002336C22 related cluster n=1 Tax=unknown RepID=UPI0002336C22
SoyBase E_val: 0 ISS
Expression Patterns of Glyma02g02660
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma02g02660
Paralog Evidence Comments
Glyma01g04860 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma02g02660 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.02g022500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma02g02660
Coding sequences of Glyma02g02660
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma02g02660.2 sequence type=CDS gene model=Glyma02g02660 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCACTTCCTCACCGCACCCTCCTACCTTTCGCTGCTCTCGCCCCATTTGACCCCTTCCCTCGCCCCCCCACTCCACTTCCCCGCCTCGACCGGGCGGGTGCGCCGGTTTGCGGTTGAAACCGGTTCGGTTCTCCGTTCTTCTCTCTGGAAGGTGAACCGCTACAAGGGTTTGTGGTTGTCCTGCACCGGGTTCTTGCGGCGGTGCAAGGATTGGGACGGAGAGTTTTCCTCTCTTGAGTCGCAGATTTTGGATTTCATGCAGAATACCGATAAGCCCGAAGTGTTTCCGACCAAGGAAGAGTTGGTTGCTGCAGGGAGGGTGGATTTGGTCAACGCTATTGTCAACGAAGGAGGGTGGCTCGCTTTTGGGTGGGATTTGAATGGTGGGTCCAGCGAAATTCTCGGTTTTGAAGATAATAGTGGCGGTGGAATTGAGGGTAATGGGGCTCAGGCTTCTGGGGTTTCTTCTTCTTCTCCTTCTCAATCAGATAATTCAGTGGGAATTGAAGCTGGAAAATCAGGCATTGAGGGTATATTGAGTCGGTTGGAGAAACAAAGAAATAGATCTTTTGGACTTGACTTAGATAATGTTTCTTTTGAAAATAATGAAGATAAAGATGAATGGGATCCTAGAACCACAACGGATACAATGGCCGCTGGCCTAGAAAATGGTAGCAGAGCATCCTCATCAAGCTCTACTAGCAGTCATCTCAGTGGTTCTCAGATCAAACATGATCCGCACGGATCTCAATTAGGTACTGAAAATTTAAGAAACTCGCTTAAGCCAGAGACGTGGAGGAGTTGGATTATTCAGAGAACTGGTTTTCTGGATACAGATTTTGAAGATGCTGAAATTGTTCCCAATGAAACTGAGAAAGGAGGCATGAGTGACGCTTCAAGACAACCTGATATCCTCAACAGAAGGGAGTTATCTTCTGAACATATAAACAGAGAAACAGGACTATATTCTCTTGATGGAAATGCAAATCACAGTGACATTAAATCCCGTATCCAGAATCTGGAATCGGAGCTATCTTCTATACTTCACTTGTTGAGGTCTAGCTCGGATAAAATTACAATGCAGATGGTCCAGAAGAGCTCTTCTGATGATCTAGCAAAGCTTTCCGATGCTTGGGAATTCCAGGAAAATGAGATCATGAATGCTCAGGACAGATTGCGTTCTATACGGGCTAAGTTGTCAGTGTTAGAAGGAAAGATGGCATTGGCAATAATGGATGCACATAAGGTAGTTGAAGAAAAGCAGAAGAAGATTAATAATGCGCAAAAAGCTTTGCAAATTCTGAAGACTACTTGTGTAGTTTGGCCTAATAGTGCTTCAGAAGTACTTTTAACAGGATCATTTGATGGTTGGTCCACCAAGAGAAAAATGGAGAGGTTAAGTAGTGGTATATTTTCTTTGAACTTGCAGCTGTATCCTGGAAGATATGAGATGAAGTTCATTGTAGATGGAGAATGGAAAATTGATCCATTGCGCCCTGTTGTTACCAGCAATGGCTATGAGAATAATCTTCTCATCATTTATGATTGA
Predicted protein sequences of Glyma02g02660
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma02g02660.2 sequence type=predicted peptide gene model=Glyma02g02660 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MHFLTAPSYLSLLSPHLTPSLAPPLHFPASTGRVRRFAVETGSVLRSSLWKVNRYKGLWLSCTGFLRRCKDWDGEFSSLESQILDFMQNTDKPEVFPTKEELVAAGRVDLVNAIVNEGGWLAFGWDLNGGSSEILGFEDNSGGGIEGNGAQASGVSSSSPSQSDNSVGIEAGKSGIEGILSRLEKQRNRSFGLDLDNVSFENNEDKDEWDPRTTTDTMAAGLENGSRASSSSSTSSHLSGSQIKHDPHGSQLGTENLRNSLKPETWRSWIIQRTGFLDTDFEDAEIVPNETEKGGMSDASRQPDILNRRELSSEHINRETGLYSLDGNANHSDIKSRIQNLESELSSILHLLRSSSDKITMQMVQKSSSDDLAKLSDAWEFQENEIMNAQDRLRSIRAKLSVLEGKMALAIMDAHKVVEEKQKKINNAQKALQILKTTCVVWPNSASEVLLTGSFDGWSTKRKMERLSSGIFSLNLQLYPGRYEMKFIVDGEWKIDPLRPVVTSNGYENNLLIIYD*