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A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G02850 | AT | Annotation by Michelle Graham. TAIR10: beta glucosidase 11 | chr1:630569-633085 FORWARD LENGTH=497 | SoyBase | E_val: 0 | ISS |
GO:0005975 | GO-bp | Annotation by Michelle Graham. GO Biological Process: carbohydrate metabolic process | SoyBase | N/A | ISS |
GO:0005576 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: extracellular region | SoyBase | N/A | ISS |
GO:0003824 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: catalytic activity | SoyBase | N/A | ISS |
GO:0004553 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds | SoyBase | N/A | ISS |
GO:0043169 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: cation binding | SoyBase | N/A | ISS |
KOG0626 | KOG | Beta-glucosidase, lactase phlorizinhydrolase, and related proteins | JGI | ISS | |
PTHR10353 | Panther | GLYCOSIDE HYDROLASES | JGI | ISS | |
PF00232 | PFAM | Glycosyl hydrolase family 1 | JGI | ISS | |
UniRef100_I1JBM0 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JBM0_SOYBN | SoyBase | E_val: 0 | ISS |
UniRef100_Q8S3J3 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Hydroxyisourate hydrolase n=1 Tax=Glycine max RepID=HIUH_SOYBN | SoyBase | E_val: 0 | ISS |
Glyma02g02230 not represented in the dataset |
Glyma02g02230 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.02g018700 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma02g02230.3 sequence type=transcript gene model=Glyma02g02230 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high CAATAATTGACTTTATGTTAACATTTCTCATAAAATATCAACAACTACCACTAGGATCACTAGGCCTTTTTGGCACATTCGATTCTAGATGATGACTTTCTCCGTCTCTACACGTAATAAATGAAGTCCTAAGATGCCATCGAAAGAAGAAAATTAAAACGAACATGCATGTATCTATGAATGATGGAACCACCACAAACGAGGTTGATGATCAACGTTTTCATAGTGAGTTTCTTAGCACTACTTGTGAACTTGGTGGTGGGAGTGCTCGGCGCTGATAACTATAGCAGAGATGATTTTCCTCTTGACTTTGTTTTCGGTTCAGGAACCTCTGCTTATCAGGTGGAAGGAGCTGCTAACAAAGATGGAAGAACTCCTAGCATCTGGGACACCTTTGCCTACGCTGGATATGCCCATGGAGAAAATGGAGATGTAGCCTGTGATGGGTACCACAAGTACAAGGAAGATGTGCAGCTAATGCTGGAAACAGGGCTTGATGCCTATAGATTTTCGATTTCATGGTCAAGATTGTTACCAAATGGCAGAGGACCCGTCAATCCCAAAGGATTACAGTACTACAACAATCTCATCAACGAACTTATCAGCAATGGAATCCAACCACATGCCACGCTACACAACTTTGATCTTCCACAGGTACTTGAAGATGAATATGGAGGATGGATTAGTCGTGACATCATAAGAGACTTCACATACTACGCAGAAGTATGTTTTAGAGAGTTTGGTGACAGAGTGTTGTATTGGACCACTGTAAATGAGCCCAATGTTTTCGCCTTAGGTGGTTATGATCAGGGAAACAGCCCACCTCGACGATGTTCTCCCCCATTTTGTGCTACAAACGACACAATGGGCAACTCAACATATGAACCCTACTTGGCTGTTCATCATATTTTGTTATCACATTCTTCAGCTGCTAGATTGTACTGGAGAAAATATAGGGACAAACAACATGGATTTGTTGGTATCTCTATTTACACGTTTGGGATTTTTCCTCAAACAAATACAGAAAAAGACAGGGTAGCATCTCAACGAGCCCGTGATTTTTTTGTTGGTTGGATTATGGAACCCCTGCAATATGGAGACTATCCCATTTCCATGAAGACAAATGCAGGTGAAAGAATTCCGGCCTTCACAAATCATGAATCTAAACAAGTTAAGGGTTCATTTGACTTCATAGGCGTAATTCACTACACCAATCTCAATGTCTCAGACAATTCTGACGCCCTTAAGAACCAACTGAGAGATTTCACTGCAGACATGGCGGCAAATATCTTTGGAGAGGATCTGTTTTCAAATGAAGAGTACCTTATAACACCGTGGGGTTTGCGTCAAGAGTTGAATAAATTCAAGCTCCTTTATGGGAATCCTCCTATATTTATTCATGAAAATGGTCAACGGACAGCAAGTAATTCGTCACTGCAAGACGTGACAAGGGTGAAATACTTGCATGGATATATTGGTAGCGTGCTTGATGCCTTAAGAGATGGATCAAATATAAAGGGGTATTTTGCATGGTCTTTCCTGGATTTGTTCGAGTTGCTAGATGGATACAAGTCGAGCTTTGGCCTATACTACGTTGATAGGGATGATCCAGAGTTGAAGAGATACCCAAAGCTCTCTGCAAAATGGTACAACCGGTTTTTGAAGGGTAGAAGGACCTCTATAGTTGGAACTATTGAACTTGAGAAGGATCCATCACTTGTTTTTGTTTCCCAATTATTTGAGTAGGTTCTTTATTAATTTCTTTTCACAAGATCATGCTTAGTGGTGTTATTAGCTATGCTTACTTTTCCTTGTATACATACATAAAATAAGAATTTATGTGGAGGGAGCCTAGCTGCCCGGGCAAAATTCCTCTCAAATATTGGTAATGTTTAAAAGAGATATTCCTTTTCTGAAGATATTTTACTAAAAGTAATATGTGAAATGTAATTTAGAGTAAAAGCTTTCATCATTTTCACTCTCTCAATTT >Glyma02g02230.4 sequence type=transcript gene model=Glyma02g02230 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high CAATAATTGACTTTATGTTAACATTTCTCATAAAATATCAACAACTACCACTAGGATCACTAGGCCTTTTTGGCACATTCGATTCTAGATGATGACTTTCTCCGTCTCTACACGTAATAAATGAAGTCCTAAGATGCCATCGAAAGAAGAAAATTAAAACGAACATGCATGTATCTATGAATGATGGAACCACCACAAACGAGGTTGATGATCAACGTTTTCATAGTGAGTTTCTTAGCACTACTTGTGAACTTGGTGGTGGGAGTGCTCGGCGCTGATAACTATAGCAGAGATGATTTTCCTCTTGACTTTGTTTTCGGTTCAGGAACCTCTGCTTATCAGGATATGCCCATGGAGAAAATGGAGATGTAGCCTGTGATGGGTACCACAAGTACAAGGAAGATGTGCAGCTAATGCTGGAAACAGGGCTTGATGCCTATAGATTTTCGATTTCATGGTCAAGATTGTTACCAAATGGCAGAGGACCCGTCAATCCCAAAGGATTACAGTACTACAACAATCTCATCAACGAACTTATCAGCAATGGAATCCAACCACATGCCACGCTACACAACTTTGATCTTCCACAGGTACTTGAAGATGAATATGGAGGATGGATTAGTCGTGACATCATAAGAGACTTCACATACTACGCAGAAGTATGTTTTAGAGAGTTTGGTGACAGAGTGTTGTATTGGACCACTGTAAATGAGCCCAATGTTTTCGCCTTAGGTGGTTATGATCAGGGAAACAGCCCACCTCGACGATGTTCTCCCCCATTTTGTGCTACAAACGACACAATGGGCAACTCAACATATGAACCCTACTTGGCTGTTCATCATATTTTGTTATCACATTCTTCAGCTGCTAGATTGTACTGGAGAAAATATAGGGACAAACAACATGGATTTGTTGGTATCTCTATTTACACGTTTGGGATTTTTCCTCAAACAAATACAGAAAAAGACAGGGTAGCATCTCAACGAGCCCGTGATTTTTTTGTTGGTTGGATTATGGAACCCCTGCAATATGGAGACTATCCCATTTCCATGAAGACAAATGCAGGTGAAAGAATTCCGGCCTTCACAAATCATGAATCTAAACAAGTTAAGGGTTCATTTGACTTCATAGGCGTAATTCACTACACCAATCTCAATGTCTCAGACAATTCTGACGCCCTTAAGAACCAACTGAGAGATTTCACTGCAGACATGGCGGCAAATATCTTTGGAGAGGATCTGTTTTCAAATGAAGAGTACCTTATAACACCGTGGGGTTTGCGTCAAGAGTTGAATAAATTCAAGCTCCTTTATGGGAATCCTCCTATATTTATTCATGAAAATGGTCAACGGACAGCAAGTAATTCGTCACTGCAAGACGTGACAAGGGTGAAATACTTGCATGGATATATTGGTAGCGTGCTTGATGCCTTAAGAGATGGATCAAATATAAAGGGGTATTTTGCATGGTCTTTCCTGGATTTGTTCGAGTTGCTAGATGGATACAAGTCGAGCTTTGGCCTATACTACGTTGATAGGGATGATCCAGAGTTGAAGAGATACCCAAAGCTCTCTGCAAAATGGTACAACCGGTTTTTGAAGGGTAGAAGGACCTCTATAGTTGGAACTATTGAACTTGAGAAGGATCCATCACTTGTTTTTGTTTCCCAATTATTTGAGTAGGTTCTTTATTAATTTCTTTTCACAAGATCATGCTTAGTGGTGTTATTAGCTATGCTTACTTTTCCTTGTATACATACATAAAATAAGAATTTATGTGGAGGGAGCCTAGCTGCCCGGGCAAAATTCCTCTCAAATATTGGTAATGTTTAAAAGAGATATTCCTTTTCTGAAGATATTTTACTAAAAGTAATATGTGAAATGTAATTTAGAGTAAAAGCTTTCATCATTTTCACTCTCTCAATTT
>Glyma02g02230.2 sequence type=CDS gene model=Glyma02g02230 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGATGGAACCACCACAAACGAGGTTGATGATCAACGTTTTCATAGTGAGTTTCTTAGCACTACTTGTGAACTTGGTGGTGGGAGTGCTCGGCGCTGATAACTATAGCAGAGATGATTTTCCTCTTGACTTTGTTTTCGGTTCAGGAACCTCTGCTTATCAGGTGGAAGGAGCTGCTAACAAAGATGGAAGAACTCCTAGCATCTGGGACACCTTTGCCTACGCTGGATATGCCCATGGAGAAAATGGAGATGTAGCCTGTGATGGGTACCACAAGTACAAGGAAGATGTGCAGCTAATGCTGGAAACAGGGCTTGATGCCTATAGATTTTCGATTTCATGGTCAAGATTGTTACCAAATGGCAGAGGACCCGTCAATCCCAAAGGATTACAGTACTACAACAATCTCATCAACGAACTTATCAGCAATGGAATCCAACCACATGCCACGCTACACAACTTTGATCTTCCACAGGTACTTGAAGATGAATATGGAGGATGGATTAGTCGTGACATCATAAGAGACTTCACATACTACGCAGAAGTATGTTTTAGAGAGTTTGGTGACAGAGTGTTGTATTGGACCACTGTAAATGAGCCCAATGTTTTCGCCTTAGGTGGTTATGATCAGGGAAACAGCCCACCTCGACGATGTTCTCCCCCATTTTGTGCTACAAACGACACAATGGGCAACTCAACATATGAACCCTACTTGGCTGTTCATCATATTTTGTTATCACATTCTTCAGCTGCTAGATTGTACTGGAGAAAATATAGGGACAAACAACATGGATTTGTTGGTATCTCTATTTACACGTTTGGGATTTTTCCTCAAACAAATACAGAAAAAGACAGGGTAGCATCTCAACGAGCCCGTGATTTTTTTGTTGGTTGGATTATGGAACCCCTGCAATATGGAGACTATCCCATTTCCATGAAGACAAATGCAGGTGAAAGAATTCCGGCCTTCACAAATCATGAATCTAAACAAGTTAAGGGTTCATTTGACTTCATAGGCGTAATTCACTACACCAATCTCAATGTCTCAGACAATTCTGACGCCCTTAAGAACCAACTGAGAGATTTCACTGCAGACATGGCGGCAAATATCTTTGGAGAGGATCTGTTTTCAAATGAAGAGGTCAACGGACAGCAAGTAATTCGTCACTGCAAGACGTGA >Glyma02g02230.3 sequence type=CDS gene model=Glyma02g02230 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGATGGAACCACCACAAACGAGGTTGATGATCAACGTTTTCATAGTGAGTTTCTTAGCACTACTTGTGAACTTGGTGGTGGGAGTGCTCGGCGCTGATAACTATAGCAGAGATGATTTTCCTCTTGACTTTGTTTTCGGTTCAGGAACCTCTGCTTATCAGGTGGAAGGAGCTGCTAACAAAGATGGAAGAACTCCTAGCATCTGGGACACCTTTGCCTACGCTGGATATGCCCATGGAGAAAATGGAGATGTAGCCTGTGATGGGTACCACAAGTACAAGGAAGATGTGCAGCTAATGCTGGAAACAGGGCTTGATGCCTATAGATTTTCGATTTCATGGTCAAGATTGTTACCAAATGGCAGAGGACCCGTCAATCCCAAAGGATTACAGTACTACAACAATCTCATCAACGAACTTATCAGCAATGGAATCCAACCACATGCCACGCTACACAACTTTGATCTTCCACAGGTACTTGAAGATGAATATGGAGGATGGATTAGTCGTGACATCATAAGAGACTTCACATACTACGCAGAAGTATGTTTTAGAGAGTTTGGTGACAGAGTGTTGTATTGGACCACTGTAAATGAGCCCAATGTTTTCGCCTTAGGTGGTTATGATCAGGGAAACAGCCCACCTCGACGATGTTCTCCCCCATTTTGTGCTACAAACGACACAATGGGCAACTCAACATATGAACCCTACTTGGCTGTTCATCATATTTTGTTATCACATTCTTCAGCTGCTAGATTGTACTGGAGAAAATATAGGGACAAACAACATGGATTTGTTGGTATCTCTATTTACACGTTTGGGATTTTTCCTCAAACAAATACAGAAAAAGACAGGGTAGCATCTCAACGAGCCCGTGATTTTTTTGTTGGTTGGATTATGGAACCCCTGCAATATGGAGACTATCCCATTTCCATGAAGACAAATGCAGGTGAAAGAATTCCGGCCTTCACAAATCATGAATCTAAACAAGTTAAGGGTTCATTTGACTTCATAGGCGTAATTCACTACACCAATCTCAATGTCTCAGACAATTCTGACGCCCTTAAGAACCAACTGAGAGATTTCACTGCAGACATGGCGGCAAATATCTTTGGAGAGGATCTGTTTTCAAATGAAGAGTACCTTATAACACCGTGGGGTTTGCGTCAAGAGTTGAATAAATTCAAGCTCCTTTATGGGAATCCTCCTATATTTATTCATGAAAATGGTCAACGGACAGCAAGTAATTCGTCACTGCAAGACGTGACAAGGGTGAAATACTTGCATGGATATATTGGTAGCGTGCTTGATGCCTTAAGAGATGGATCAAATATAAAGGGGTATTTTGCATGGTCTTTCCTGGATTTGTTCGAGTTGCTAGATGGATACAAGTCGAGCTTTGGCCTATACTACGTTGATAGGGATGATCCAGAGTTGAAGAGATACCCAAAGCTCTCTGCAAAATGGTACAACCGGTTTTTGAAGGGTAGAAGGACCTCTATAGTTGGAACTATTGAACTTGAGAAGGATCCATCACTTGTTTTTGTTTCCCAATTATTTGAGTAG >Glyma02g02230.4 sequence type=CDS gene model=Glyma02g02230 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGCTGGAAACAGGGCTTGATGCCTATAGATTTTCGATTTCATGGTCAAGATTGTTACCAAATGGCAGAGGACCCGTCAATCCCAAAGGATTACAGTACTACAACAATCTCATCAACGAACTTATCAGCAATGGAATCCAACCACATGCCACGCTACACAACTTTGATCTTCCACAGGTACTTGAAGATGAATATGGAGGATGGATTAGTCGTGACATCATAAGAGACTTCACATACTACGCAGAAGTATGTTTTAGAGAGTTTGGTGACAGAGTGTTGTATTGGACCACTGTAAATGAGCCCAATGTTTTCGCCTTAGGTGGTTATGATCAGGGAAACAGCCCACCTCGACGATGTTCTCCCCCATTTTGTGCTACAAACGACACAATGGGCAACTCAACATATGAACCCTACTTGGCTGTTCATCATATTTTGTTATCACATTCTTCAGCTGCTAGATTGTACTGGAGAAAATATAGGGACAAACAACATGGATTTGTTGGTATCTCTATTTACACGTTTGGGATTTTTCCTCAAACAAATACAGAAAAAGACAGGGTAGCATCTCAACGAGCCCGTGATTTTTTTGTTGGTTGGATTATGGAACCCCTGCAATATGGAGACTATCCCATTTCCATGAAGACAAATGCAGGTGAAAGAATTCCGGCCTTCACAAATCATGAATCTAAACAAGTTAAGGGTTCATTTGACTTCATAGGCGTAATTCACTACACCAATCTCAATGTCTCAGACAATTCTGACGCCCTTAAGAACCAACTGAGAGATTTCACTGCAGACATGGCGGCAAATATCTTTGGAGAGGATCTGTTTTCAAATGAAGAGTACCTTATAACACCGTGGGGTTTGCGTCAAGAGTTGAATAAATTCAAGCTCCTTTATGGGAATCCTCCTATATTTATTCATGAAAATGGTCAACGGACAGCAAGTAATTCGTCACTGCAAGACGTGACAAGGGTGAAATACTTGCATGGATATATTGGTAGCGTGCTTGATGCCTTAAGAGATGGATCAAATATAAAGGGGTATTTTGCATGGTCTTTCCTGGATTTGTTCGAGTTGCTAGATGGATACAAGTCGAGCTTTGGCCTATACTACGTTGATAGGGATGATCCAGAGTTGAAGAGATACCCAAAGCTCTCTGCAAAATGGTACAACCGGTTTTTGAAGGGTAGAAGGACCTCTATAGTTGGAACTATTGAACTTGAGAAGGATCCATCACTTGTTTTTGTTTCCCAATTATTTGAGTAG
>Glyma02g02230.2 sequence type=predicted peptide gene model=Glyma02g02230 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MMEPPQTRLMINVFIVSFLALLVNLVVGVLGADNYSRDDFPLDFVFGSGTSAYQVEGAANKDGRTPSIWDTFAYAGYAHGENGDVACDGYHKYKEDVQLMLETGLDAYRFSISWSRLLPNGRGPVNPKGLQYYNNLINELISNGIQPHATLHNFDLPQVLEDEYGGWISRDIIRDFTYYAEVCFREFGDRVLYWTTVNEPNVFALGGYDQGNSPPRRCSPPFCATNDTMGNSTYEPYLAVHHILLSHSSAARLYWRKYRDKQHGFVGISIYTFGIFPQTNTEKDRVASQRARDFFVGWIMEPLQYGDYPISMKTNAGERIPAFTNHESKQVKGSFDFIGVIHYTNLNVSDNSDALKNQLRDFTADMAANIFGEDLFSNEEVNGQQVIRHCKT* >Glyma02g02230.3 sequence type=predicted peptide gene model=Glyma02g02230 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MMEPPQTRLMINVFIVSFLALLVNLVVGVLGADNYSRDDFPLDFVFGSGTSAYQVEGAANKDGRTPSIWDTFAYAGYAHGENGDVACDGYHKYKEDVQLMLETGLDAYRFSISWSRLLPNGRGPVNPKGLQYYNNLINELISNGIQPHATLHNFDLPQVLEDEYGGWISRDIIRDFTYYAEVCFREFGDRVLYWTTVNEPNVFALGGYDQGNSPPRRCSPPFCATNDTMGNSTYEPYLAVHHILLSHSSAARLYWRKYRDKQHGFVGISIYTFGIFPQTNTEKDRVASQRARDFFVGWIMEPLQYGDYPISMKTNAGERIPAFTNHESKQVKGSFDFIGVIHYTNLNVSDNSDALKNQLRDFTADMAANIFGEDLFSNEEYLITPWGLRQELNKFKLLYGNPPIFIHENGQRTASNSSLQDVTRVKYLHGYIGSVLDALRDGSNIKGYFAWSFLDLFELLDGYKSSFGLYYVDRDDPELKRYPKLSAKWYNRFLKGRRTSIVGTIELEKDPSLVFVSQLFE* >Glyma02g02230.4 sequence type=predicted peptide gene model=Glyma02g02230 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MLETGLDAYRFSISWSRLLPNGRGPVNPKGLQYYNNLINELISNGIQPHATLHNFDLPQVLEDEYGGWISRDIIRDFTYYAEVCFREFGDRVLYWTTVNEPNVFALGGYDQGNSPPRRCSPPFCATNDTMGNSTYEPYLAVHHILLSHSSAARLYWRKYRDKQHGFVGISIYTFGIFPQTNTEKDRVASQRARDFFVGWIMEPLQYGDYPISMKTNAGERIPAFTNHESKQVKGSFDFIGVIHYTNLNVSDNSDALKNQLRDFTADMAANIFGEDLFSNEEYLITPWGLRQELNKFKLLYGNPPIFIHENGQRTASNSSLQDVTRVKYLHGYIGSVLDALRDGSNIKGYFAWSFLDLFELLDGYKSSFGLYYVDRDDPELKRYPKLSAKWYNRFLKGRRTSIVGTIELEKDPSLVFVSQLFE*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||