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Report for Sequence Feature Glyma02g01100

Feature Type:gene_model
Chromosome:Gm02
Start:822824
stop:829317
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma02g01100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G47000AT Annotation by Michelle Graham. TAIR10: ATP binding cassette subfamily B4 | chr2:19310008-19314750 REVERSE LENGTH=1286 SoyBaseE_val: 0ISS
GO:0000303GO-bp Annotation by Michelle Graham. GO Biological Process: response to superoxide SoyBaseN/AISS
GO:0006810GO-bp Annotation by Michelle Graham. GO Biological Process: transport SoyBaseN/AISS
GO:0006888GO-bp Annotation by Michelle Graham. GO Biological Process: ER to Golgi vesicle-mediated transport SoyBaseN/AISS
GO:0007165GO-bp Annotation by Michelle Graham. GO Biological Process: signal transduction SoyBaseN/AISS
GO:0009407GO-bp Annotation by Michelle Graham. GO Biological Process: toxin catabolic process SoyBaseN/AISS
GO:0009414GO-bp Annotation by Michelle Graham. GO Biological Process: response to water deprivation SoyBaseN/AISS
GO:0009630GO-bp Annotation by Michelle Graham. GO Biological Process: gravitropism SoyBaseN/AISS
GO:0009651GO-bp Annotation by Michelle Graham. GO Biological Process: response to salt stress SoyBaseN/AISS
GO:0009723GO-bp Annotation by Michelle Graham. GO Biological Process: response to ethylene stimulus SoyBaseN/AISS
GO:0009733GO-bp Annotation by Michelle Graham. GO Biological Process: response to auxin stimulus SoyBaseN/AISS
GO:0009735GO-bp Annotation by Michelle Graham. GO Biological Process: response to cytokinin stimulus SoyBaseN/AISS
GO:0009737GO-bp Annotation by Michelle Graham. GO Biological Process: response to abscisic acid stimulus SoyBaseN/AISS
GO:0009738GO-bp Annotation by Michelle Graham. GO Biological Process: abscisic acid mediated signaling pathway SoyBaseN/AISS
GO:0009743GO-bp Annotation by Michelle Graham. GO Biological Process: response to carbohydrate stimulus SoyBaseN/AISS
GO:0009753GO-bp Annotation by Michelle Graham. GO Biological Process: response to jasmonic acid stimulus SoyBaseN/AISS
GO:0009873GO-bp Annotation by Michelle Graham. GO Biological Process: ethylene mediated signaling pathway SoyBaseN/AISS
GO:0009926GO-bp Annotation by Michelle Graham. GO Biological Process: auxin polar transport SoyBaseN/AISS
GO:0010315GO-bp Annotation by Michelle Graham. GO Biological Process: auxin efflux SoyBaseN/AISS
GO:0010540GO-bp Annotation by Michelle Graham. GO Biological Process: basipetal auxin transport SoyBaseN/AISS
GO:0010583GO-bp Annotation by Michelle Graham. GO Biological Process: response to cyclopentenone SoyBaseN/AISS
GO:0042538GO-bp Annotation by Michelle Graham. GO Biological Process: hyperosmotic salinity response SoyBaseN/AISS
GO:0043090GO-bp Annotation by Michelle Graham. GO Biological Process: amino acid import SoyBaseN/AISS
GO:0043161GO-bp Annotation by Michelle Graham. GO Biological Process: proteasomal ubiquitin-dependent protein catabolic process SoyBaseN/AISS
GO:0043248GO-bp Annotation by Michelle Graham. GO Biological Process: proteasome assembly SoyBaseN/AISS
GO:0048767GO-bp Annotation by Michelle Graham. GO Biological Process: root hair elongation SoyBaseN/AISS
GO:0051788GO-bp Annotation by Michelle Graham. GO Biological Process: response to misfolded protein SoyBaseN/AISS
GO:0055085GO-bp Annotation by Michelle Graham. GO Biological Process: transmembrane transport SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0009506GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0000166GO-mf Annotation by Michelle Graham. GO Molecular Function: nucleotide binding SoyBaseN/AISS
GO:0005524GO-mf Annotation by Michelle Graham. GO Molecular Function: ATP binding SoyBaseN/AISS
GO:0008559GO-mf Annotation by Michelle Graham. GO Molecular Function: xenobiotic-transporting ATPase activity SoyBaseN/AISS
GO:0016887GO-mf Annotation by Michelle Graham. GO Molecular Function: ATPase activity SoyBaseN/AISS
GO:0017111GO-mf Annotation by Michelle Graham. GO Molecular Function: nucleoside-triphosphatase activity SoyBaseN/AISS
GO:0042626GO-mf Annotation by Michelle Graham. GO Molecular Function: ATPase activity, coupled to transmembrane movement of substances SoyBaseN/AISS
KOG0055 KOG Multidrug/pheromone exporter, ABC superfamily JGI ISS
PTHR24222Panther FAMILY NOT NAMED JGI ISS
PTHR24222:SF96Panther JGI ISS
PF00005PFAM ABC transporter JGI ISS
PF00664PFAM ABC transporter transmembrane region JGI ISS
UniRef100_G7IBR0UniRef Annotation by Michelle Graham. Most informative UniRef hit: ABC transporter B family member n=1 Tax=Medicago truncatula RepID=G7IBR0_MEDTR SoyBaseE_val: 0ISS
UniRef100_I1JBB1UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JBB1_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma02g01100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma02g01100 not represented in the dataset
Glyma02g01100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g01100 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.02g008000 Wm82.a2.v1IGC As supplied by JGI

References for Glyma02g01100
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma02g01100
>Glyma02g01100.1   sequence type=CDS   gene model=Glyma02g01100   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGATGCGGAGAATGGCGAAGAGAGAAAACATCATGAGGCAAGCACGTCAGAGAATAGTGCAGAAACAAGCACGAATGGGGAGAAGAGAGAAAAGGGCAAACAAAAGGAAAAGCCAGAGACAGTTCCATTTCACAAGCTGTTCGCTTTTGCAGACTCCACTGACATTCTTTTGATGGCTGTTGGGACCATTGGTGCCATTGGAAATGGTTTGGGTTTGCCTCTCATGACTTTGCTGTTCGGTCAAATGATTGATAGCTTCGGTAGTAACCAGCAAAACACTCACGTGGTTGAAGAAGTATCCAAGGTTTCTCTTAAATTTGTGTACTTGGCAGTAGGATCTGGGATGGCGGCGTTTCTCCAGGTGACTAGTTGGATGGTCACTGGGGAGAGACAAGCTGCACGGATACGGGGATTGTATTTGAAAACTATTCTGAGACAAGATGTTGCTTTCTTTGATAAGGAAACGAACACGGGAGAGGTGATAGGGAGGATGTCTGGTGATACGGTTCTCATACAAGATGCCATGGGTGAGAAGGTTGGGAAATTTCTGCAGCTAATAGCAACATTCATTGGGGGATTTGTGATAGCATTTGTCAGAGGGTGGCTTCTTACTGTTGTCATGTTGTCCACCCTTCCGCTTCTTGCTTTGTCAGGTGCTACTATGGCCGTCATCATAGGCAGGATGGCTTCTCGAGGTCAAACAGCTTATGCAAAAGCTGCACATGTAGTTGAACAGACCATTGGATCAATAAGAACTGTTGCATCCTTTACTGGGGAAAAGCAAGCAGTATCTAGTTATAGCAAATTTCTTGTAGATGCTTACAAATCAGGAGTTCATGAAGGTTCCACAGCTGGCGCTGGTCTAGGCACAGTTATGTTAGTTATTTTCTGTGGTTATGCTTTGGCTGTATGGTTTGGCGCAAAGATGATAATGGAAAAAGGATATAATGGGGGCACGGTGATTAATGTGATTATTGCTGTGCTAACTGCTTCAATGTCTCTTGGACAGGCATCCCCTAGCATGAGTGCTTTCGCTGCAGGTCAGGCTGCAGCTTACAAAATGTTTCAGACAATTGAAAGGAAGCCAGAGATAGATGCTTATGATCCAAATGGAAAAATATTAGAAGATATTCAAGGTGAAATAGAGTTGAGGGATGTTGATTTCAGTTATCCTGCAAGACCTGAGGAACTGATATTTAATGGATTCTCTCTTCATATACCAAGTGGTACAACTGCGGCTTTAGTTGGACAAAGTGGAAGTGGAAAGTCTACGGTTATCAGCTTGGTAGAAAGATTCTATGATCCACAGGCAGGTGAAGTTCTTATTGATGGCATCAACCTGAAAGAATTTCAGCTTAGGTGGATTAGAGGAAAAATTGGCCTTGTCAGCCAGGAGCCGGTGTTGTTTGCATCTAGCATTAAGGATAACATTGCATATGGAAAGGAGGGAGCAACAATTGAAGAGATAAGATCTGCATCTGAACTTGCTAATGCTGCTAAATTCATTGATAAGCTTCCACAGGGATTGGACACGATGGTTGGTGAGCATGGAACTCAGCTGTCTGGTGGACAGAAGCAACGCATTGCCATTGCAAGAGCAATCCTGAAAAATCCGAGAATTCTACTTCTGGATGAAGCAACAAGTGCACTTGACGCAGAGTCTGAAAGGATAGTGCAAGAGGCTCTAGACAGGATCATGGTCAACAGAACTACTATTATAGTGGCGCATCGCTTGAGCACAGTGAGGAATGCTGATGTGATTGCTGTCATTCATAGAGGGAAGATGGTTGAGAAAGGAACACACATAGAATTACTAAAGGATCCTGAGGGAGCTTACTCTCAACTTATACGCCTACAAGAAGTAAACAAAGAGACAGAAGGAAATGCTGACCAACACAACAACAGTGAACTTTCTGTAGAATCCTTTAGACAATCTAGTCAAAAGAGATCACTTCAAAGATCTATTAGTAGGGGGTCATCCTTAGGGAATAGTAGCCGCCACTCCTTTTCAGTTTCCTTTGGTTTACCCACAGGAGTTAACGTTGCTGATCCTGAACATGAAAGCTCACAACCCAAAGAAGAAGCACCAGAGGTTCCACTCAGCCGCCTTGCTTCCCTCAACAAGCCAGAGATTCCAGTTCTTGTGATTGGATCTGTAGCTGCCATAGCAAATGGGGTTATATTTCCAATATTTGGCGTGCTGATTTCCAGTGTCATCAAGACATTTTATGAACCATTTGATGAGATGAAAAAGGACTCCAAGTTTTGGGCACTGATGTTTATGATCCTTGGTCTTGCATCATTTCTTATAATTCCTGCACGAGGATACTTTTTTGCGGTGGCAGGGTGTAAGTTAATCCAACGTATCAGGCAAATGTGTTTTGAGAAGGTTGTCAACATGGAGGTTAGTTGGTTTGATGAGCCTGAAAACTCAAGTGGTGCCATTGGTGCAAGGCTCTCAGCAGATGCTGCTTCTGTTCGTGCCCTTGTCGGTGATGCGCTGGGACTATTGGTTCAAAATTTCGCAACTGTACTGGCAGGTTTGATTATTGCTTTCGTTGCATCTTGGCAGCTGGCATTAATTATTCTTGTCTTGATTCCTCTGATTGGAGTAAATGGATATGTTCAAATGAAATTCATGAAGGGATTCAGTGCAGATGCAAAGATGATGTACGAGGAAGCAAGCCAAGTTGCTAATGATGCAGTTGGAAGCATAAGAACAGTTGCTTCTTTCTGTGCTGAAGACAAGGTTATGGAACTATACAAGAATAAATGTGAGGGCCCCATGAAAACAGGGATACGGCAAGGGTTGATCAGCGGATCAGGATTTGGGGTTTCATTTTTCTTACTGTTTTGTGTTTATGCAACCAGTTTCTACGCAGGAGCTAGACTTGTGGATGCTGGGAAGGCAACATTCTCAGATGTTTTCCGGGTTTTCTTTGCATTAACTATGGCAGCTATTGGAGTTTCCCAATCAAGCTCCTTTGCTCCTGACTCAAGCAAAGCCAAGTCAGCTACTGCTTCCATATTTGGAATTATTGATAAGAAGTCAAAGATAGATCCTGGTGATGAATCTGGTAGCACACTGGACAGCGTTAAGGGAGAAATTGAGCTTCGTCATGTGAGCTTCAAGTATCCTTCTAGGCCTGATATACAGATTTTTCGAGACCTCAGCTTGACTATCCATTCTGGCAAGACAGTGGCTCTTGTTGGTGAAAGTGGAAGTGGAAAATCGACAGTGATTGCCTTGTTGCAAAGATTTTATAATCCTGATTCAGGCCAAATCACACTTGATGGGATAGAAATTCGTGAGTTACAGCTCAAGTGGTTAAGGCAGCAGATGGGTCTTGTAAGCCAAGAGCCAGTTTTGTTCAATGAAACTATACGTGCCAATATTGCCTATGGAAAAGGAGGTGATGCTACTGAAGCAGAAATCATAGCTGCAGCAGAAATGGCCAATGCACATAAATTCATTAGTGGCTTACAACAGGGTTATGATACTATAGTGGGAGAGAGAGGAACCCAATTATCTGGTGGGCAGAAGCAACGGGTAGCAATTGCTCGTGCCATAATTAAAAGTCCAAAGATATTGCTACTAGATGAGGCTACAAGTGCATTAGATGCTGAGTCAGAAAGAGTTGTTCAAGATGCGTTGGACAAAGTCATGGTGAACAGAACTACTGTGGTTGTGGCACATCGTCTATCTACAATAAAAAATGCAGATGTGATTGCTGTTGTGAAAAATGGAGTTATAGTGGAGAAAGGGAAGCATGAAAAGCTCATTAACGTCAGTGGTGGATTTTATGCTTCCTTAGTCCAACTTCACACAAGTGCCTCAACAGTTTGA
Predicted protein sequences of Glyma02g01100
>Glyma02g01100.1   sequence type=predicted peptide   gene model=Glyma02g01100   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDAENGEERKHHEASTSENSAETSTNGEKREKGKQKEKPETVPFHKLFAFADSTDILLMAVGTIGAIGNGLGLPLMTLLFGQMIDSFGSNQQNTHVVEEVSKVSLKFVYLAVGSGMAAFLQVTSWMVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVIGRMSGDTVLIQDAMGEKVGKFLQLIATFIGGFVIAFVRGWLLTVVMLSTLPLLALSGATMAVIIGRMASRGQTAYAKAAHVVEQTIGSIRTVASFTGEKQAVSSYSKFLVDAYKSGVHEGSTAGAGLGTVMLVIFCGYALAVWFGAKMIMEKGYNGGTVINVIIAVLTASMSLGQASPSMSAFAAGQAAAYKMFQTIERKPEIDAYDPNGKILEDIQGEIELRDVDFSYPARPEELIFNGFSLHIPSGTTAALVGQSGSGKSTVISLVERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEGATIEEIRSASELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQEALDRIMVNRTTIIVAHRLSTVRNADVIAVIHRGKMVEKGTHIELLKDPEGAYSQLIRLQEVNKETEGNADQHNNSELSVESFRQSSQKRSLQRSISRGSSLGNSSRHSFSVSFGLPTGVNVADPEHESSQPKEEAPEVPLSRLASLNKPEIPVLVIGSVAAIANGVIFPIFGVLISSVIKTFYEPFDEMKKDSKFWALMFMILGLASFLIIPARGYFFAVAGCKLIQRIRQMCFEKVVNMEVSWFDEPENSSGAIGARLSADAASVRALVGDALGLLVQNFATVLAGLIIAFVASWQLALIILVLIPLIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEDKVMELYKNKCEGPMKTGIRQGLISGSGFGVSFFLLFCVYATSFYAGARLVDAGKATFSDVFRVFFALTMAAIGVSQSSSFAPDSSKAKSATASIFGIIDKKSKIDPGDESGSTLDSVKGEIELRHVSFKYPSRPDIQIFRDLSLTIHSGKTVALVGESGSGKSTVIALLQRFYNPDSGQITLDGIEIRELQLKWLRQQMGLVSQEPVLFNETIRANIAYGKGGDATEAEIIAAAEMANAHKFISGLQQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHEKLINVSGGFYASLVQLHTSASTV*






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