Glyma01g43691 - SoyBase

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Report for Sequence Feature Glyma01g43691

Feature Type:	gene_model
Chromosome:	Gm01
Start:	54641656
stop:	54647376
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma01g43691

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G12430	AT	Annotation by Michelle Graham. TAIR10: Heat shock protein DnaJ with tetratricopeptide repeat \| chr5:4028475-4034086 REVERSE LENGTH=1165	SoyBase	E_val: 0	ISS
GO:0006457	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein folding	SoyBase	N/A	ISS
GO:0007155	GO-bp	Annotation by Michelle Graham. GO Biological Process: cell adhesion	SoyBase	N/A	ISS
GO:0010090	GO-bp	Annotation by Michelle Graham. GO Biological Process: trichome morphogenesis	SoyBase	N/A	ISS
GO:0010228	GO-bp	Annotation by Michelle Graham. GO Biological Process: vegetative to reproductive phase transition of meristem	SoyBase	N/A	ISS
GO:0016926	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein desumoylation	SoyBase	N/A	ISS
GO:0045010	GO-bp	Annotation by Michelle Graham. GO Biological Process: actin nucleation	SoyBase	N/A	ISS
GO:0048765	GO-bp	Annotation by Michelle Graham. GO Biological Process: root hair cell differentiation	SoyBase	N/A	ISS
GO:0050665	GO-bp	Annotation by Michelle Graham. GO Biological Process: hydrogen peroxide biosynthetic process	SoyBase	N/A	ISS
GO:0071555	GO-bp	Annotation by Michelle Graham. GO Biological Process: cell wall organization	SoyBase	N/A	ISS
GO:0031072	GO-mf	Annotation by Michelle Graham. GO Molecular Function: heat shock protein binding	SoyBase	N/A	ISS
KOG0550	KOG	Molecular chaperone (DnaJ superfamily)	JGI		ISS
PTHR22904	Panther	CHAPERONE BINDING PROTEIN	JGI		ISS
PTHR22904:SF36	Panther	HSC70-INTERACTING PROTEIN-RELATED	JGI		ISS
PF00226	PFAM	DnaJ domain	JGI		ISS
PF00515	PFAM	Tetratricopeptide repeat	JGI		ISS
UniRef100_G7JQK6	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Chaperone protein dnaJ n=1 Tax=Medicago truncatula RepID=G7JQK6_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_I1JAF8	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1JAF8_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma01g43691

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma01g43691 not represented in the dataset	Glyma01g43691 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma01g43691 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.01g227100	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma01g43691

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma01g43691

Limit To All Plant Sequences

>Glyma01g43691.2   sequence type=transcript   gene model=Glyma01g43691   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AATGGATCACCTTTCCGATTGAGAATGAGATCAGTTTTCAATCGTTTCAAATTTGGAAATAAAACTGTATTATTTGTGATCCCCAAGGAAGACGGTTTTTTGAAATGGCATCAGAAGATATGGCCAACTTGAAAATTGAAGATAGCAAAGACCAAAGAGATGGTGGATTTGTGTTCACATCCAAACAAGACAATAATAATTCTTCAGGCTCATCATTCCTTCAGCTTGGTGATGCTCATGCTCATGCCATTGATAAATTCAAATTCGGTGCAAGGAAGGAACAAAGTGGCAACAATAAAAGTAGACCAAAACTCAAGTTATCTACCCCTCCCCAGGGATATCATGATTTTATTTGGAAGCCAAAGAATGAGTCATTTGGTTTTTTTAGTGTGGATGCCACATCAATTGATCAGTGTTCGAATAAGAATGAATGTGAAGTTGTAGACATAGAGAATAAGGAGGAAGCTTCAGATTGTGGTGGAAGCTTCAAGTCTGCCAATGATGAAGTGGACATAACAAATGATGGTTCAAGACATATGAGTGGCTTTACATTTTCTGCTTCTCAAGTGCAATCATCTAGCTCTAGCCTCAAACGCCACCCCAATAAGATAAATTGGGTAAAAGTTGGTCATGCTCATCAAAATGATACTTACAACTCCACTCCTAATCCATTATCATTTTCTGGAACTTCCTCTCTTTTCACTTCAGGGCAAGCCAATACAAGGGGATCTGAGGTGCAAGGGATAAAGGATGAATTTGCTTCCATTTCTGCTACAACCCTTGCGGCTGAGGAAGCCTGTGAAAAGTGGAGACTCAAAGGAAACCAAGCCTACAAAAATGGAAATTTGTCTGTGGCTGAGGATTGCTACACACAAGGAGTTAGTTGTGCTTCTAAAGTTGAAGCGTCTCAGAGATGCCGAAGGGCCTTGATGCTGTGTTATAGCAACCGTGCTGCCACACGCATGTCTCTTGGTAGGATGAGAGATGCAGTAGAAGATTGTAGGCTGGCTGCTGAAATTGATCCAAATTTCCTCAGGGTGCGACTTAGAGCTGCAAATTGTTTCCTTGCTATGGGGGAAGCTGAGGATGCGTCAAAGTATTCCAAGAGGTGCTTGCAATCAGGAACCGATTTTTGTGTAGATAAAAAAATTGTTGTGGAAGCCTCCGATCTCTTGCAAAAGACACAGAAAGTATCAGAATTAATCAATCATTCTGATGAACTGTTGCAAAGAAGAACGGCTGCTGATGCAGAGAGAGCATTGGAACTTATAAATGAGGCATTGGTGATAAGTTCATACTCTGAAAAATTGCTTGAAATGAAAGCGGAGGCTCTTTTTATGCTATGTAGATATGAGGAAGTGATCCAGCTGTGTGATCAAACCGTTGGCTCTGCCGAGAAGAATTCCTATCCATTGGATGCTGATTGCGAAGTGAGAGATCTGGATAGTTCACAGCTTTCAAAAGGCTTATATTTCAGGCTTTGGCGGTGCTCAATGATGCTTAAATCCTACTTTCACCTAGGAAAGCTTGAAGAGGGTCTTTCTTTACTGGAGGAACAAGAGGAAAAGGTATCTGCCATAAACATGAGTGGAAGCAAGGTTTTGGAATCACTAATGCCACTAGCTGTCACTGTACGTGAGCTCTTGCATCATAAGACAGCAGGGAATGAAGCGTTTCAGGCAGGAAAACATGAGGAAGCTGTTGAACATTATACAGCTGCTTTATCATGTAATGTGGAATCTCTCTTATTTGCATCTGTCTGTTTTGGTAATCGGGCAGCTGCATATAAAGCATTAGGTCAAATTACTGATGCCATAGCAGATTGCAATCTGGCTATAGCTCTTGATGGAAGATACTTAAAGGCACTTTCTAGGCGTGCAACTTCATATGAGATGATCAGAGATTATGACCAAGCAGCAAGCGATATAAGGAGAGTTGTCTCTCTTCTCATTAATAGAAATCAGCATGGCATATCTGATAGATCAATCAGCTATGCCAATGATTTGAAACATAACCAAATTTGGCTTTCCGAAATAGAAGAGGAAGCCAAAAAGGGGATACCTCTTGATATGTACCTCATTTTGCATCAGCTGATTCAGATTATGATGGCAGAGGAGTTGAACATTCTGTTTCGTCATCTGAAATCAAGAAGGCCTATCACAAAGCTGCACTTAGACATCATCCAGACAAGGCTGGCCAATCTTTGGCAAGAAGTGACAATGGAGATGATCAGATATGGAAGGATATTGTTGAAGAAATAAGCAAAGATGCCGATAGGCTTTTCAAAATAATTGGAGAGGCATATGCAGTCCTGTCGGACACTGCCAAGCGTTCACAGTATGATTCTGAAGAAGAAATGAGAAATTCCCAAAAGAAACGCCATGGAAACAGCATCAATAGAAATAATGTCATTGATCAAACTGACAATAGGAGACACTGGAAAGAGGTTTGAAGATCAAGTGGTAACTCATCTTTTAAAGATTCTGAAGCTGGCAGGTCAAGTAGGCAATAAGAAAATCTGTGTTGAATTTTAGTCAGTGATGTGTTTTATCTTATGCATTTGAGACCAATGGCAATGCAGTTGAACAAGCTCGGTTCATCGGTTCTTGGGATTTCTTTGGGATATTGGAAGAATTTTTCTTTTGACATGCGAAAGAGATCATTGGTTGCATTCGATTGTTGTTTTGTTTTTTGTTTTTTTTTCTACTGACCATTAATCAGCTTGGATGACAGCAAGCAAGTGAAAAGGAAGTTTGAAATTTTGCATTCTGTCTGGTTTGTCAGGTGTGTAAAGATTTTTTTTTTCTTTCTTGAATGTGTGTATAGATCTATACTATCAGAAAGTTGATACCGCATTTGCATTTGTGTAATACCACATGAAAAATTTTGATGACCTGAACATGTGCTGCCAAAGATAGAGTACATTTACATTTTAGCAGGAA

Coding sequences of Glyma01g43691

Limit To All Plant Sequences

>Glyma01g43691.1   sequence type=CDS   gene model=Glyma01g43691   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCATCAGAAGATATGGCCAACTTGAAAATTGAAGATAGCAAAGACCAAAGAGATGGTGGATTTGTGTTCACATCCAAACAAGACAATAATAATTCTTCAGGCTCATCATTCCTTCAGCTTGGTGATGCTCATGCTCATGCCATTGATAAATTCAAATTCGGTGCAAGGAAGGAACAAAGTGGCAACAATAAAAGTAGACCAAAACTCAAGTTATCTACCCCTCCCCAGGGATATCATGATTTTATTTGGAAGCCAAAGAATGAGTCATTTGGTTTTTTTAGTGTGGATGCCACATCAATTGATCAGTGTTCGAATAAGAATGAATGTGAAGTTGTAGACATAGAGAATAAGGAGGAAGCTTCAGATTGTGGTGGAAGCTTCAAGTCTGCCAATGATGAAGTGGACATAACAAATGATGGTTCAAGACATATGAGTGGCTTTACATTTTCTGCTTCTCAAGTGCAATCATCTAGCTCTAGCCTCAAACGCCACCCCAATAAGATAAATTGGGTAAAAGTTGGTCATGCTCATCAAAATGATACTTACAACTCCACTCCTAATCCATTATCATTTTCTGGAACTTCCTCTCTTTTCACTTCAGGGCAAGCCAATACAAGGGGATCTGAGGTGCAAGGGATAAAGGATGAATTTGCTTCCATTTCTGCTACAACCCTTGCGGCTGAGGAAGCCTGTGAAAAGTGGAGACTCAAAGGAAACCAAGCCTACAAAAATGGAAATTTGTCTGTGGCTGAGGATTGCTACACACAAGGAGTTAGTTGTGCTTCTAAAGTTGAAGCGTCTCAGAGATGCCGAAGGGCCTTGATGCTGTGTTATAGCAACCGTGCTGCCACACGCATGTCTCTTGGTAGGATGAGAGATGCAGTAGAAGATTGTAGGCTGGCTGCTGAAATTGATCCAAATTTCCTCAGGGTGCGACTTAGAGCTGCAAATTGTTTCCTTGCTATGGGGGAAGCTGAGGATGCGTCAAAGTATTCCAAGAGGTGCTTGCAATCAGGAACCGATTTTTGTGTAGATAAAAAAATTGTTGTGGAAGCCTCCGATCTCTTGCAAAAGACACAGAAAGTATCAGAATTAATCAATCATTCTGATGAACTGTTGCAAAGAAGAACGGCTGCTGATGCAGAGAGAGCATTGGAACTTATAAATGAGGCATTGGTGATAAGTTCATACTCTGAAAAATTGCTTGAAATGAAAGCGGAGGCTCTTTTTATGCTATGTAGATATGAGGAAGTGATCCAGCTGTGTGATCAAACCGTTGGCTCTGCCGAGAAGAATTCCTATCCATTGGATGCTGATTGCGAAGTGAGAGATCTGGATAGTTCACAGCTTTCAAAAGGCTTATATTTCAGGCTTTGGCGGTGCTCAATGATGCTTAAATCCTACTTTCACCTAGGAAAGCTTGAAGAGGGTCTTTCTTTACTGGAGGAACAAGAGGAAAAGGTATCTGCCATAAACATGAGTGGAAGCAAGGTTTTGGAATCACTAATGCCACTAGCTGTCACTGTACGTGAGCTCTTGCATCATAAGACAGCAGGGAATGAAGCGTTTCAGGCAGGAAAACATGAGGAAGCTGTTGAACATTATACAGCTGCTTTATCATGTAATGTGGAATCTCTCTTATTTGCATCTGTCTGTTTTGGTAATCGGGCAGCTGCATATAAAGCATTAGGTCAAATTACTGATGCCATAGCAGATTGCAATCTGGCTATAGCTCTTGATGGAAGATACTTAAAGGCACTTTCTAGGCGTGCAACTTCATATGAGATGATCAGAGATTATGACCAAGCAGCAAGCGATATAAGGAGAGTTGTCTCTCTTCTCATTAATAGAAATCAGCATGGCATATCTGATAGATCAATCAGCTATGCCAATGATTTGAAACATAACCAAATTTGGCTTTCCGAAATAGAAGAGGAAGCCAAAAAGGGGATACCTCTTGATATGTACCTCATTTTAGGAGTTGAACATTCTGTTTCGTCATCTGAAATCAAGAAGGCCTATCACAAAGCTGCACTTAGACATCATCCAGACAAGGCTGGCCAATCTTTGGCAAGAAGTGACAATGGAGATGATCAGATATGGAAGGATATTGTTGAAGAAATAAGCAAAGATGCCGATAGGCTTTTCAAAATAATTGGAGAGGCATATGCAGTCCTGTCGGACACTGCCAAGCGTTCACAGTATGATTCTGAAGAAGAAATGAGAAATTCCCAAAAGAAACGCCATGGAAACAGCATCAATAGAAATAATGTCATTGATCAAACTGACAATAGGAGACACTGGAAAGAGGTTTGA

>Glyma01g43691.2   sequence type=CDS   gene model=Glyma01g43691   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCATCAGAAGATATGGCCAACTTGAAAATTGAAGATAGCAAAGACCAAAGAGATGGTGGATTTGTGTTCACATCCAAACAAGACAATAATAATTCTTCAGGCTCATCATTCCTTCAGCTTGGTGATGCTCATGCTCATGCCATTGATAAATTCAAATTCGGTGCAAGGAAGGAACAAAGTGGCAACAATAAAAGTAGACCAAAACTCAAGTTATCTACCCCTCCCCAGGGATATCATGATTTTATTTGGAAGCCAAAGAATGAGTCATTTGGTTTTTTTAGTGTGGATGCCACATCAATTGATCAGTGTTCGAATAAGAATGAATGTGAAGTTGTAGACATAGAGAATAAGGAGGAAGCTTCAGATTGTGGTGGAAGCTTCAAGTCTGCCAATGATGAAGTGGACATAACAAATGATGGTTCAAGACATATGAGTGGCTTTACATTTTCTGCTTCTCAAGTGCAATCATCTAGCTCTAGCCTCAAACGCCACCCCAATAAGATAAATTGGGTAAAAGTTGGTCATGCTCATCAAAATGATACTTACAACTCCACTCCTAATCCATTATCATTTTCTGGAACTTCCTCTCTTTTCACTTCAGGGCAAGCCAATACAAGGGGATCTGAGGTGCAAGGGATAAAGGATGAATTTGCTTCCATTTCTGCTACAACCCTTGCGGCTGAGGAAGCCTGTGAAAAGTGGAGACTCAAAGGAAACCAAGCCTACAAAAATGGAAATTTGTCTGTGGCTGAGGATTGCTACACACAAGGAGTTAGTTGTGCTTCTAAAGTTGAAGCGTCTCAGAGATGCCGAAGGGCCTTGATGCTGTGTTATAGCAACCGTGCTGCCACACGCATGTCTCTTGGTAGGATGAGAGATGCAGTAGAAGATTGTAGGCTGGCTGCTGAAATTGATCCAAATTTCCTCAGGGTGCGACTTAGAGCTGCAAATTGTTTCCTTGCTATGGGGGAAGCTGAGGATGCGTCAAAGTATTCCAAGAGGTGCTTGCAATCAGGAACCGATTTTTGTGTAGATAAAAAAATTGTTGTGGAAGCCTCCGATCTCTTGCAAAAGACACAGAAAGTATCAGAATTAATCAATCATTCTGATGAACTGTTGCAAAGAAGAACGGCTGCTGATGCAGAGAGAGCATTGGAACTTATAAATGAGGCATTGGTGATAAGTTCATACTCTGAAAAATTGCTTGAAATGAAAGCGGAGGCTCTTTTTATGCTATGTAGATATGAGGAAGTGATCCAGCTGTGTGATCAAACCGTTGGCTCTGCCGAGAAGAATTCCTATCCATTGGATGCTGATTGCGAAGTGAGAGATCTGGATAGTTCACAGCTTTCAAAAGGCTTATATTTCAGGCTTTGGCGGTGCTCAATGATGCTTAAATCCTACTTTCACCTAGGAAAGCTTGAAGAGGGTCTTTCTTTACTGGAGGAACAAGAGGAAAAGGTATCTGCCATAAACATGAGTGGAAGCAAGGTTTTGGAATCACTAATGCCACTAGCTGTCACTGTACGTGAGCTCTTGCATCATAAGACAGCAGGGAATGAAGCGTTTCAGGCAGGAAAACATGAGGAAGCTGTTGAACATTATACAGCTGCTTTATCATGTAATGTGGAATCTCTCTTATTTGCATCTGTCTGTTTTGGTAATCGGGCAGCTGCATATAAAGCATTAGGTCAAATTACTGATGCCATAGCAGATTGCAATCTGGCTATAGCTCTTGATGGAAGATACTTAAAGGCACTTTCTAGGCGTGCAACTTCATATGAGATGATCAGAGATTATGACCAAGCAGCAAGCGATATAAGGAGAGTTGTCTCTCTTCTCATTAATAGAAATCAGCATGGCATATCTGATAGATCAATCAGCTATGCCAATGATTTGAAACATAACCAAATTTGGCTTTCCGAAATAGAAGAGGAAGCCAAAAAGGGGATACCTCTTGATATGTACCTCATTTTGCATCAGCTGATTCAGATTATGATGGCAGAGGAGTTGAACATTCTGTTTCGTCATCTGAAATCAAGAAGGCCTATCACAAAGCTGCACTTAGACATCATCCAGACAAGGCTGGCCAATCTTTGGCAAGAAGTGACAATGGAGATGATCAGATATGGAAGGATATTGTTGAAGAAATAA

Predicted protein sequences of Glyma01g43691

Limit To All Plant Sequences

>Glyma01g43691.1   sequence type=predicted peptide   gene model=Glyma01g43691   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MASEDMANLKIEDSKDQRDGGFVFTSKQDNNNSSGSSFLQLGDAHAHAIDKFKFGARKEQSGNNKSRPKLKLSTPPQGYHDFIWKPKNESFGFFSVDATSIDQCSNKNECEVVDIENKEEASDCGGSFKSANDEVDITNDGSRHMSGFTFSASQVQSSSSSLKRHPNKINWVKVGHAHQNDTYNSTPNPLSFSGTSSLFTSGQANTRGSEVQGIKDEFASISATTLAAEEACEKWRLKGNQAYKNGNLSVAEDCYTQGVSCASKVEASQRCRRALMLCYSNRAATRMSLGRMRDAVEDCRLAAEIDPNFLRVRLRAANCFLAMGEAEDASKYSKRCLQSGTDFCVDKKIVVEASDLLQKTQKVSELINHSDELLQRRTAADAERALELINEALVISSYSEKLLEMKAEALFMLCRYEEVIQLCDQTVGSAEKNSYPLDADCEVRDLDSSQLSKGLYFRLWRCSMMLKSYFHLGKLEEGLSLLEEQEEKVSAINMSGSKVLESLMPLAVTVRELLHHKTAGNEAFQAGKHEEAVEHYTAALSCNVESLLFASVCFGNRAAAYKALGQITDAIADCNLAIALDGRYLKALSRRATSYEMIRDYDQAASDIRRVVSLLINRNQHGISDRSISYANDLKHNQIWLSEIEEEAKKGIPLDMYLILGVEHSVSSSEIKKAYHKAALRHHPDKAGQSLARSDNGDDQIWKDIVEEISKDADRLFKIIGEAYAVLSDTAKRSQYDSEEEMRNSQKKRHGNSINRNNVIDQTDNRRHWKEV*

>Glyma01g43691.2   sequence type=predicted peptide   gene model=Glyma01g43691   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MASEDMANLKIEDSKDQRDGGFVFTSKQDNNNSSGSSFLQLGDAHAHAIDKFKFGARKEQSGNNKSRPKLKLSTPPQGYHDFIWKPKNESFGFFSVDATSIDQCSNKNECEVVDIENKEEASDCGGSFKSANDEVDITNDGSRHMSGFTFSASQVQSSSSSLKRHPNKINWVKVGHAHQNDTYNSTPNPLSFSGTSSLFTSGQANTRGSEVQGIKDEFASISATTLAAEEACEKWRLKGNQAYKNGNLSVAEDCYTQGVSCASKVEASQRCRRALMLCYSNRAATRMSLGRMRDAVEDCRLAAEIDPNFLRVRLRAANCFLAMGEAEDASKYSKRCLQSGTDFCVDKKIVVEASDLLQKTQKVSELINHSDELLQRRTAADAERALELINEALVISSYSEKLLEMKAEALFMLCRYEEVIQLCDQTVGSAEKNSYPLDADCEVRDLDSSQLSKGLYFRLWRCSMMLKSYFHLGKLEEGLSLLEEQEEKVSAINMSGSKVLESLMPLAVTVRELLHHKTAGNEAFQAGKHEEAVEHYTAALSCNVESLLFASVCFGNRAAAYKALGQITDAIADCNLAIALDGRYLKALSRRATSYEMIRDYDQAASDIRRVVSLLINRNQHGISDRSISYANDLKHNQIWLSEIEEEAKKGIPLDMYLILHQLIQIMMAEELNILFRHLKSRRPITKLHLDIIQTRLANLWQEVTMEMIRYGRILLKK*

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