Glyma01g42480 - SoyBase

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Report for Sequence Feature Glyma01g42480

Feature Type:	gene_model
Chromosome:	Gm01
Start:	53715626
stop:	53729704
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma01g42480

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G63020	AT	Annotation by Michelle Graham. TAIR10: nuclear RNA polymerase D1A \| chr1:23355329-23361126 REVERSE LENGTH=1453	SoyBase	E_val: 0	ISS
GO:0006306	GO-bp	Annotation by Michelle Graham. GO Biological Process: DNA methylation	SoyBase	N/A	ISS
GO:0006342	GO-bp	Annotation by Michelle Graham. GO Biological Process: chromatin silencing	SoyBase	N/A	ISS
GO:0006346	GO-bp	Annotation by Michelle Graham. GO Biological Process: methylation-dependent chromatin silencing	SoyBase	N/A	ISS
GO:0006351	GO-bp	Annotation by Michelle Graham. GO Biological Process: transcription, DNA-dependent	SoyBase	N/A	ISS
GO:0006354	GO-bp	Annotation by Michelle Graham. GO Biological Process: DNA-dependent transcription, elongation	SoyBase	N/A	ISS
GO:0007267	GO-bp	Annotation by Michelle Graham. GO Biological Process: cell-cell signaling	SoyBase	N/A	ISS
GO:0009616	GO-bp	Annotation by Michelle Graham. GO Biological Process: virus induced gene silencing	SoyBase	N/A	ISS
GO:0010267	GO-bp	Annotation by Michelle Graham. GO Biological Process: production of ta-siRNAs involved in RNA interference	SoyBase	N/A	ISS
GO:0010495	GO-bp	Annotation by Michelle Graham. GO Biological Process: long-distance posttranscriptional gene silencing	SoyBase	N/A	ISS
GO:0016246	GO-bp	Annotation by Michelle Graham. GO Biological Process: RNA interference	SoyBase	N/A	ISS
GO:0016569	GO-bp	Annotation by Michelle Graham. GO Biological Process: covalent chromatin modification	SoyBase	N/A	ISS
GO:0030422	GO-bp	Annotation by Michelle Graham. GO Biological Process: production of siRNA involved in RNA interference	SoyBase	N/A	ISS
GO:0031047	GO-bp	Annotation by Michelle Graham. GO Biological Process: gene silencing by RNA	SoyBase	N/A	ISS
GO:0031048	GO-bp	Annotation by Michelle Graham. GO Biological Process: chromatin silencing by small RNA	SoyBase	N/A	ISS
GO:0035196	GO-bp	Annotation by Michelle Graham. GO Biological Process: production of miRNAs involved in gene silencing by miRNA	SoyBase	N/A	ISS
GO:0051567	GO-bp	Annotation by Michelle Graham. GO Biological Process: histone H3-K9 methylation	SoyBase	N/A	ISS
GO:0000418	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: DNA-directed RNA polymerase IV complex	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0003677	GO-mf	Annotation by Michelle Graham. GO Molecular Function: DNA binding	SoyBase	N/A	ISS
GO:0003899	GO-mf	Annotation by Michelle Graham. GO Molecular Function: DNA-directed RNA polymerase activity	SoyBase	N/A	ISS
GO:0005515	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein binding	SoyBase	N/A	ISS
KOG0260	KOG	RNA polymerase II, large subunit	JGI		ISS
PTHR19376	Panther	DNA-DIRECTED RNA POLYMERASE	JGI		ISS
PTHR19376:SF10	Panther	DNA-DIRECTED RNA POLYMERASE LARGEST SUBUNIT	JGI		ISS
PF00623	PFAM	RNA polymerase Rpb1, domain 2	JGI		ISS
PF04983	PFAM	RNA polymerase Rpb1, domain 3	JGI		ISS
PF04997	PFAM	RNA polymerase Rpb1, domain 1	JGI		ISS
PF04998	PFAM	RNA polymerase Rpb1, domain 5	JGI		ISS
PF05000	PFAM	RNA polymerase Rpb1, domain 4	JGI		ISS
PF11523	PFAM	Protein of unknown function (DUF3223)	JGI		ISS
UniRef100_I1JA29	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max RepID=I1JA29_SOYBN	SoyBase	E_val: 0	ISS
UniRef100_UPI0002337AFB	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI0002337AFB related cluster n=1 Tax=unknown RepID=UPI0002337AFB	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma01g42480

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma01g42480 not represented in the dataset	Glyma01g42480 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma01g42480

Paralog	Evidence	Comments
Glyma11g02921	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma01g42480 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.01g215700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma01g42480

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma01g42480

Limit To All Plant Sequences

>Glyma01g42480.2   sequence type=transcript   gene model=Glyma01g42480   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TTATCGCGTCCTCGGTCTACACAAAGTGCCCCTTCTCAACTCGGCGTTTGTCTCGTGGTCGCGTGGAAAGTGATCAGCGGTGTTCCATTTCGCTATTCATTCGTCTTTACTTTACTGCGCTCTCTCTCTCTCCAATTCTCTCTTCGGTTTCGATTTTGGTCTTCGCAGAGCATTGCCGCGTAGCTCACACGCACCACCACCATTGTCTGCGTGCTGGTTTAGTCGATCATTCGTTCCTTTCACTCAAGTTACCTTGAAATTCTGAGTGCGCGAATTTCTTCGCACACGTGTGGTGCTATTGGCGGCACAAACCGGGGAGCGCAGCTTATCACTGTGCCCAACCCTTTTTGATTACTTGAAATTTTCTGCCGAGTGCAAGGTTACCAAGTTTCATGGATGATGACCTTTTACAGAGGAACAAAACACCATCTGTTGTCATAAAAGCGATAAAGTTCGATGTCTTAACTGAAGAAGATATAGAGAATATCTCTGTTTTGGAGATAAATGCAGCCGGGCAGGTCACTGGGTCAAATTTGGGATTGCCAAATGCATCTGATGAGTGTGCCACATGTGGCACTAAAGACAAAAAGTTCTGTGAAGGTCATTTTGGAGTAATCAAATTTCCTACTCCCATACTCCATCCATATTTTATGTTAGAAATTGCGCACATCTTGAACAAGATTTGCCCTGTTTGTAAATCTATTCGTCACAAATCCAAGGGTGCTCGATTAATCTATGGAACCAAGCGGTCTAATGATTGCAATTATTGTTCTGTGTATCCATCAATGCAATTTAGAGTTTCCTCCAACGATCTCTTTAGAAGAACTGCAATTATTGTTGAAGTAAAGGCTTCAAAGAAAACTTTGGGAACAGAAATACCTGCTGATTTTTGGAATTTTATTCCTTGTGATGCTCAACAAGAAGAAAATTATGTAAATAGAAGGGTTTTATCACCTGTGCAGGTTAATTATTTGTTGAATGATGTTGATCCAGACTTTATTGAAAAATATATTCCAAGAAAGAATTTGCTGTGTCTTAATTGCTTCCCGGTGACTCCAAATTGTCATCGTGTGACAGAAGTCCCTTATGCAATTTCTAGTGGAAGCCGGTTGAGTTTTGATGACAGGACTCGATCTTGTAAGAAATTGGTTGATTTCAGGGGTACAGCTAATGAATTAAGTTCTCGTGTTTTGGATTGCCTGAGGATCTCTAAGCTAAATCCTGATAAAACCCCAAATAGTATTTTTGCTGATATCCAGCAAAGAAAGATTGGAGAAAATGCTTTCAATTCTTCTGGTTTAAGATGGATAAAAGATGTGGTTCTTGGAAAACGCAATGACAGTTCATTCCGTACTGTGGTTGTTGGTGATCCAGACCTTGAGCTTAGTGAAATTGGTATACCTTGTCATATTGCTGAAAGTTTGCAGGTTTCTGAGTATGTGAATAGGCAGAATAGGGAGAAGCTGCTTTATTGTTGTGAGCTACACTTGTTAGAGAAGGGGAAAATAAATGTCTGCAGAAAGGGTAGTATAGTTCATCTGTATAAAAAGGAAGATCTACAAATAGGTGACAAATTTTATAGGCCTCTTGCTGATGGGGATAAAGTGCTGATAAATAGGCCCCCTTCTATACATCAACATTCTATGATTTCTCTCACAGTTAGGGTCCTTCCAATATCTTCTGTAGTGTGTATTAACCCACTCTGTTGTTCCCCACTACGTGGGGATTTTGATGGTGATTGCCTTCACGGGTATATTCCACAATCGGTTACTGCAAGAATTGAGCTTAATGAGCTGGTTGCTTTAGATAGGCAATTGATTAATGGGCAAAGTGGTAGAAATCTTCTTTCACTTTCCCAAGATAGTTTGACTGCTGCATATTTGCTAATGGAAGATGGGGTCCTTTTGAATGTTTATCAAATGCAGCAGCTTCAAATGCTTTCTATTTCTAACAAAAGATTAATACCTCCTGCAGTTGTTAAAGCTCCCTCTAGTAATAGCTCACTTTGGAATGGGAAGCAATTATTCAGCATGCTTTTGCCGTATGATTTTGACTATTCTTTTCCTTCAGATGGTGTTGTTGTTAGTGATGGAGAGCTTGTATCTTCTTCTGAGGCTTCTGGTTGGTTACGCGATTCTGACTACAATGTTTTTCAGAGTCTTGTGGAACATTATCAAGGGAAGACTCTAAACTTTTTGTATGCAGCACAAAAAGTTCTGTGTGAGTGGCTGTCTATGACAGGTTTTAGTGTTTCACTCTCTGATTTGTACCTTTCTTCTGATTCGTATGCACGGGAAAACATGATAGAGGAAATCTTTTATGGCTTACAAGATGCAGAGCGGGCTTGTAATTTCAAGCAGCTATTGTTGGATTATTATTGTGATTTTCTGTCAGGAAGTCTTCAAGAGAGTGAAAATGCTATCACTGTTAATGCAGATCGTCTGAATTATGAAAGACAAATATCTGCTTCTCTCAGTCAAGCGTCAGTTGATGCTTTTAGGCAAGTTTTTCGCAATATTCAAAGTTTAGCTGATAAATATGCATGCAAGGGAAATTCTTTCCTTGCAATGTTTAAGGCTGGAAGCAAGGGTAATTTGCTGAAATTAGTTCAACATTCCATGTGCCTTGGCATGCAAAATTCTCTGGTCCGCTTGTCATACAGACTACCCCGTCATCTTTCATGTGCTGACTGGAATAGTCAAAAGTGGGTTGATTCAATCCAGATGTCTTCTGGTACCCTTGAATCTGTTCAGTCATACATTCCATATGCTGTAGTTGAAAGTTCTTTTTTAACTGGGTTGAATCCACTTGAATGTTTTGTTCATTCAGTGACAAATCGTGATAGCTCTTTCAGTGACCATGCGGACCTTCCTGGTACACTGACACGTAGACTTATGTTCTTCATGCGTGATTTGTATGATGCATATGATGGAACGGTGAGAAATTTATATGGTAATCAACTTATTCAGTTTTCTTATGATATTGAAGAGGACTCTTCATGCAATAAAGGTTTCCAGCAGTATGCTTTAGGTGGTGAATCAGTTGGGGCTATTTCTGCCTGTGCAATTTCTGAAGCTGCATACAGTGCTTTGGGTCAACCAGTTAGTCTACTCGAAACATCACCTTTGCTGAATTTGAAAAATGTTCTGGAGTGTGGTTCAAGGAAAAGAAATGGTGATCAGACTGTGTCTTTATTTTTGTCTGAAAAGCTTGGTAAACAGAGACATGGGTTTGAATATGCAGCTTTAGAAGTCAAGAATTATTTGGAAAGATTGTTGTTCTCAAACATTGTTTCTAAAGTGATGATAATATTCACCCCACATGACAGCAGGAGCCAAGAAAAATACAGTCCTTGGGTCTGCCACTTTCATTTAGACAAGGAAATTGTAACAAGAAGAAAATTGAAAGTGCATTCTATCATTGACTCTCTCTATCAGAGATATTACTCTCAGAGAAAAGACTCAAAAGTCTGTTTTACCAATTTGAAAATTTCAAGCAGGAAGTGTTCTGCTGATTCCATGGTTAAGGAAGGTGAAGACACTTCTATAGATAAAGAAGAGGGTGATGATTGCATCATGGTCACAATTGTTGAAAACTCTAAGAATCCTATACAACTGGATTCTGTTCGGGACTTGGTGATACCTTTTCTTCTAGGAACAGCAATACAAGGATTTCTGGATGTCAAGAAGGTTGATATTCTCTGGAATAATCAGTCAAAAGTAACAAATTCTCGTAATGGTTTTTCTGGTGAACTGTACTTGAGGGTAACTTTGTCCAGCGAGGGTAGCAGAGGAAGATTTTGGGGTGTCCTCCTAAAGCTTTGTCACAAGATAATGCATATAATTGACTGGACACGAAGTCATACAGATAACATCAATCATTTCTCATCAGCATATGGAATTGATGCAGGGTGGCAATACTTTTTCAATAGTTTGGCATGTGCAACATCTGATACCGGCAAGTCCATCCTTCCTAAGCATTTGTGTCTTGTTGCCAATAGTCTGTCATGTAGTGGAGAGTTTGTAGGATTAAATGCTAAAGGCATGGCACTACAAAGAAAACATGCGTCCGTTTCATCACCATTTGTGCAAGCATGCTTTGCGAATCCAGGTAGTTGCTTTATAAAAGCTGCTAAGTCTGGAGCCACGGATAATCTCCAGGGCAGCCTGGATGGGTTGGCTTGGGGAAACTGTCTATCTATGGGGACAAGTGGAATGTTTGATGTCATATATTCAGAGAAGGTAGCTAAGTCTGTAGATGTGTATGAGCTGCTAGAAGCCAGTTTTGACAAGCCGAACAATAAAATTGGTACTCATTTGCACAAATATTCATCTGACAAATGCGGTTCTGAGTTTAGGCATAAAAATGGTTATGCCTTGAAAGAGGGAAAACAGTGGAAAACCATTTTAAGAAATTTTGTGACAGTAAATGATATTCAGAAGCTGACTTTTGCATCGAGGTGCATATTGAACAAGTATTCAATTGATGAGCTGCTAAGTGAGAGTGACAGGTCAACAATGCTAAGGGTTTTGAATTTTCATCCTCATAAAAGTGAGAAGTTTGGCATTGGACCACAGGACATTAAGGTTGGATGGCATCCAAAATACAAGGATAGCCGGTGCTTCCATATAATAAGAACTGATGGGACGGTTGAAGATTTTTCATACCGCAAATGCATTCTTGGTGCTCTTGATATCGTTGATCCAAAAAAATCAAAGATCCAGGAGAAAAAATGGTCAGGACATGGTGACACGTAATATCTATGCATATCCAAGCATAATAAGTGACTGTCATTTGATCTGGTGACAGTCACAGACTCTATAAAATATGAAGTGATGTTTTCGCCGAAGAAATCGTTGTAAAAATACAGTGGGAAGGGTAATAGTAGTGCCACAACTCTACAATCACAAAAAGCAACGTTGTTTTTCTGCCTTTGTTGTATTATACTATCTCAAGGCTAGACTGGGTGATAGCTTATTCAAATGTCGCTCGATGGATTTAGCTCGTCTGATAGAGGTAGTGCAGCAAATCAAGAGTAAAGTCATAACTTTTGTGCAGCAGCACATTTTGAAAGAAAGGAGATAATTCATAGATGGGAGTATACAAGATGGAACAATGGTAGTATTTTTTTTTTCTTTTCAATCTGAACAATTTAAATTTTATTTTGTATAATAAAGATGGAGTGGGTTCTTACCCTTAGCTTCTTTTTGCTTCTTCCACTAATACTTTATTTGCCAACGATTACGTAAGGCAAAGAAAGATCTAGTGGAAGCAGCAACGAGAAGCTTGTAAAAACTTGTACCCCCAGACCATTTGTATTGATGAATATGTGGCAGTTAAATATAAGATATGCCTGATTCAAATGTCATGCTTATCTCTGCATATCTCTAACGCGCATATTGAATGCGAG

Coding sequences of Glyma01g42480

Limit To All Plant Sequences

>Glyma01g42480.1   sequence type=CDS   gene model=Glyma01g42480   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGATGATGACCTTTTACAGAGGAACAAAACACCATCTGTTGTCATAAAAGCGATAAAGTTCGATGTCTTAACTGAAGAAGATATAGAGAATATCTCTGTTTTGGAGATAAATGCAGCCGGGCAGGTCACTGGGTCAAATTTGGGATTGCCAAATGCATCTGATGAGTGTGCCACATGTGGCACTAAAGACAAAAAGTTCTGTGAAGGTCATTTTGGAGTAATCAAATTTCCTACTCCCATACTCCATCCATATTTTATGTTAGAAATTGCGCACATCTTGAACAAGATTTGCCCTGTTTGTAAATCTATTCGTCACAAATCCAAGGGTGCTCGATTAATCTATGGAACCAAGCGGTCTAATGATTGCAATTATTGTTCTGTGTATCCATCAATGCAATTTAGAGTTTCCTCCAACGATCTCTTTAGAAGAACTGCAATTATTGTTGAAGTAAAGGCTTCAAAGAAAACTTTGGGAACAGAAATACCTGCTGATTTTTGGAATTTTATTCCTTGTGATGCTCAACAAGAAGAAAATTATGTAAATAGAAGGGTTTTATCACCTGTGCAGGTTAATTATTTGTTGAATGATGTTGATCCAGACTTTATTGAAAAATATATTCCAAGAAAGAATTTGCTGTGTCTTAATTGCTTCCCGGTGACTCCAAATTGTCATCGTGTGACAGAAGTCCCTTATGCAATTTCTAGTGGAAGCCGGTTGAGTTTTGATGACAGGACTCGATCTTGTAAGAAATTGGTTGATTTCAGGGGTACAGCTAATGAATTAAGTTCTCGTGTTTTGGATTGCCTGAGGATCTCTAAGCTAAATCCTGATAAAACCCCAAATAGTATTTTTGCTGATATCCAGCAAAGAAAGATTGGAGAAAATGCTTTCAATTCTTCTGGTTTAAGATGGATAAAAGATGTGGTTCTTGGAAAACGCAATGACAGTTCATTCCGTACTGTGGTTGTTGGTGATCCAGACCTTGAGCTTAGTGAAATTGGTATACCTTGTCATATTGCTGAAAGTTTGCAGGTTTCTGAGTATGTGAATAGGCAGAATAGGGAGAAGCTGCTTTATTGTTGTGAGCTACACTTGTTAGAGAAGGGGAAAATAAATGTCTGCAGAAAGGGTAGTATAGTTCATCTGTATAAAAAGGAAGATCTACAAATAGGTGACAAATTTTATAGGCCTCTTGCTGATGGGGATAAAGTGCTGATAAATAGGCCCCCTTCTATACATCAACATTCTATGATTTCTCTCACAGTTAGGGTCCTTCCAATATCTTCTGTAGTGTGTATTAACCCACTCTGTTGTTCCCCACTACGTGGGGATTTTGATGGTGATTGCCTTCACGGGTATATTCCACAATCGGTTACTGCAAGAATTGAGCTTAATGAGCTGGTTGCTTTAGATAGGCAATTGATTAATGGGCAAAGTGGTAGAAATCTTCTTTCACTTTCCCAAGATAGTTTGACTGCTGCATATTTGCTAATGGAAGATGGGGTCCTTTTGAATGTTTATCAAATGCAGCAGCTTCAAATGCTTTCTATTTCTAACAAAAGATTAATACCTCCTGCAGTTGTTAAAGCTCCCTCTAGTAATAGCTCACTTTGGAATGGGAAGCAATTATTCAGCATGCTTTTGCCGTATGATTTTGACTATTCTTTTCCTTCAGATGGTGTTGTTGTTAGTGATGGAGAGCTTGTATCTTCTTCTGAGGCTTCTGGTTGGTTACGCGATTCTGACTACAATGTTTTTCAGAGTCTTGTGGAACATTATCAAGGGAAGACTCTAAACTTTTTGTATGCAGCACAAAAAGTTCTGTGTGAGTGGCTGTCTATGACAGGTTTTAGTGTTTCACTCTCTGATTTGTACCTTTCTTCTGATTCGTATGCACGGGAAAACATGATAGAGGAAATCTTTTATGGCTTACAAGATGCAGAGCGGGCTTGTAATTTCAAGCAGCTATTGTTGGATTATTATTGTGATTTTCTGTCAGGAAGTCTTCAAGAGAGTGAAAATGCTATCACTGTTAATGCAGATCGTCTGAATTATGAAAGACAAATATCTGCTTCTCTCAGTCAAGCGTCAGTTGATGCTTTTAGGCAAGTTTTTCGCAATATTCAAAGTTTAGCTGATAAATATGCATGCAAGGGAAATTCTTTCCTTGCAATGTTTAAGGCTGGAAGCAAGGGTAATTTGCTGAAATTAGTTCAACATTCCATGTGCCTTGGCATGCAAAATTCTCTGGTCCGCTTGTCATACAGACTACCCCGTCATCTTTCATGTGCTGACTGGAATAGTCAAAAGTGGGTTGATTCAATCCAGATGTCTTCTGGTACCCTTGAATCTGTTCAGTCATACATTCCATATGCTGTAGTTGAAAGTTCTTTTTTAACTGGGTTGAATCCACTTGAATGTTTTGTTCATTCAGTGACAAATCGTGATAGCTCTTTCAGTGACCATGCGGACCTTCCTGGTACACTGACACGTAGACTTATGTTCTTCATGCGTGATTTGTATGATGCATATGATGGAACGGTGAGAAATTTATATGGTAATCAACTTATTCAGTTTTCTTATGATATTGAAGAGGACTCTTCATGCAATAAAGGTTTCCAGCAGTATGCTTTAGGTGGTGAATCAGTTGGGGCTATTTCTGCCTGTGCAATTTCTGAAGCTGCATACAGTGCTTTGGGTCAACCAGTTAGTCTACTCGAAACATCACCTTTGCTGAATTTGAAAAATGTTCTGGAGTGTGGTTCAAGGAAAAGAAATGGTGATCAGACTGTGTCTTTATTTTTGTCTGAAAAGCTTGGTAAACAGAGACATGGGTTTGAATATGCAGCTTTAGAAGTCAAGAATTATTTGGAAAGATTGTTGTTCTCAAACATTGTTTCTAAAGTGATGATAATATTCACCCCACATGACAGCAGGAGCCAAGAAAAATACAGTCCTTGGGTCTGCCACTTTCATTTAGACAAGGAAATTGTAACAAGAAGAAAATTGAAAGTGCATTCTATCATTGACTCTCTCTATCAGAGATATTACTCTCAGAGAAAAGACTCAAAAGTCTGTTTTACCAATTTGAAAATTTCAAGCAGGAAGTGTTCTGCTGATTCCATGGTTAAGGAAGGTGAAGACACTTCTATAGATAAAGAAGAGGGTGATGATTGCATCATGGTCACAATTGTTGAAAACTCTAAGAATCCTATACAACTGGATTCTGTTCGGGACTTGGTGATACCTTTTCTTCTAGGAACAGCAATACAAGGATTTCTGGATGTCAAGAAGGTTGATATTCTCTGGAATAATCAGTCAAAAGTAACAAATTCTCGTAATGGTTTTTCTGGTGAACTGTACTTGAGGGTAACTTTGTCCAGCGAGGGTAGCAGAGGAAGATTTTGGGGTGTCCTCCTAAAGCTTTGTCACAAGATAATGCATATAATTGACTGGACACGAAGTCATACAGATAACATCAATCATTTCTCATCAGCATATGGAATTGATGCAGGGTGGCAATACTTTTTCAATAGTTTGGCATGTGCAACATCTGATACCGGCAAGTCCATCCTTCCTAAGCATTTGTGTCTTGTTGCCAATAGTCTGTCATGTAGTGGAGAGTTTGTAGGATTAAATGCTAAAGGCATGGCACTACAAAGAAAACATGCGTCCGTTTCATCACCATTTGTGCAAGCATGCTTTGCGAATCCAGGTAGTTGCTTTATAAAAGCTGCTAAGTCTGGAGCCACGGATAATCTCCAGGGCAGCCTGGATGGGTTGGCTTGGGGAAACTGTCTATCTATGGGGACAAGTGGAATGTTTGATGTCATATATTCAGAGAAGGGACATCAGGTAGCTAAGTCTGTAGATGTGTATGAGCTGCTAGAAGCCAGTTTTGACAAGCCGAACAATAAAATTGGTACTCATTTGCACAAATATTCATCTGACAAATGCGGTTCTGAGTTTAGGCATAAAAATGGTTATGCCTTGAAAGAGGGAAAACAGTGGAAAACCATTTTAAGAAATTTTGTGACAGTAAATGATATTCAGAAGCTGACTTTTGCATCGAGGTGCATATTGAACAAGTATTCAATTGATGAGCTGCTAAGTGAGAGTGACAGGTCAACAATGCTAAGGGTTTTGAATTTTCATCCTCATAAAAGTGAGAAGTTTGGCATTGGACCACAGGACATTAAGGTTGGATGGCATCCAAAATACAAGGATAGCCGGTGCTTCCATATAATAAGAACTGATGGGACGGTTGAAGATTTTTCATACCGCAAATGCATTCTTGGTGCTCTTGATATCGTTGATCCAAAAAAATCAAAGATCCAGGAGAAAAAATGGTCAGGACATGGTGACACGTAA

>Glyma01g42480.2   sequence type=CDS   gene model=Glyma01g42480   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGATGATGACCTTTTACAGAGGAACAAAACACCATCTGTTGTCATAAAAGCGATAAAGTTCGATGTCTTAACTGAAGAAGATATAGAGAATATCTCTGTTTTGGAGATAAATGCAGCCGGGCAGGTCACTGGGTCAAATTTGGGATTGCCAAATGCATCTGATGAGTGTGCCACATGTGGCACTAAAGACAAAAAGTTCTGTGAAGGTCATTTTGGAGTAATCAAATTTCCTACTCCCATACTCCATCCATATTTTATGTTAGAAATTGCGCACATCTTGAACAAGATTTGCCCTGTTTGTAAATCTATTCGTCACAAATCCAAGGGTGCTCGATTAATCTATGGAACCAAGCGGTCTAATGATTGCAATTATTGTTCTGTGTATCCATCAATGCAATTTAGAGTTTCCTCCAACGATCTCTTTAGAAGAACTGCAATTATTGTTGAAGTAAAGGCTTCAAAGAAAACTTTGGGAACAGAAATACCTGCTGATTTTTGGAATTTTATTCCTTGTGATGCTCAACAAGAAGAAAATTATGTAAATAGAAGGGTTTTATCACCTGTGCAGGTTAATTATTTGTTGAATGATGTTGATCCAGACTTTATTGAAAAATATATTCCAAGAAAGAATTTGCTGTGTCTTAATTGCTTCCCGGTGACTCCAAATTGTCATCGTGTGACAGAAGTCCCTTATGCAATTTCTAGTGGAAGCCGGTTGAGTTTTGATGACAGGACTCGATCTTGTAAGAAATTGGTTGATTTCAGGGGTACAGCTAATGAATTAAGTTCTCGTGTTTTGGATTGCCTGAGGATCTCTAAGCTAAATCCTGATAAAACCCCAAATAGTATTTTTGCTGATATCCAGCAAAGAAAGATTGGAGAAAATGCTTTCAATTCTTCTGGTTTAAGATGGATAAAAGATGTGGTTCTTGGAAAACGCAATGACAGTTCATTCCGTACTGTGGTTGTTGGTGATCCAGACCTTGAGCTTAGTGAAATTGGTATACCTTGTCATATTGCTGAAAGTTTGCAGGTTTCTGAGTATGTGAATAGGCAGAATAGGGAGAAGCTGCTTTATTGTTGTGAGCTACACTTGTTAGAGAAGGGGAAAATAAATGTCTGCAGAAAGGGTAGTATAGTTCATCTGTATAAAAAGGAAGATCTACAAATAGGTGACAAATTTTATAGGCCTCTTGCTGATGGGGATAAAGTGCTGATAAATAGGCCCCCTTCTATACATCAACATTCTATGATTTCTCTCACAGTTAGGGTCCTTCCAATATCTTCTGTAGTGTGTATTAACCCACTCTGTTGTTCCCCACTACGTGGGGATTTTGATGGTGATTGCCTTCACGGGTATATTCCACAATCGGTTACTGCAAGAATTGAGCTTAATGAGCTGGTTGCTTTAGATAGGCAATTGATTAATGGGCAAAGTGGTAGAAATCTTCTTTCACTTTCCCAAGATAGTTTGACTGCTGCATATTTGCTAATGGAAGATGGGGTCCTTTTGAATGTTTATCAAATGCAGCAGCTTCAAATGCTTTCTATTTCTAACAAAAGATTAATACCTCCTGCAGTTGTTAAAGCTCCCTCTAGTAATAGCTCACTTTGGAATGGGAAGCAATTATTCAGCATGCTTTTGCCGTATGATTTTGACTATTCTTTTCCTTCAGATGGTGTTGTTGTTAGTGATGGAGAGCTTGTATCTTCTTCTGAGGCTTCTGGTTGGTTACGCGATTCTGACTACAATGTTTTTCAGAGTCTTGTGGAACATTATCAAGGGAAGACTCTAAACTTTTTGTATGCAGCACAAAAAGTTCTGTGTGAGTGGCTGTCTATGACAGGTTTTAGTGTTTCACTCTCTGATTTGTACCTTTCTTCTGATTCGTATGCACGGGAAAACATGATAGAGGAAATCTTTTATGGCTTACAAGATGCAGAGCGGGCTTGTAATTTCAAGCAGCTATTGTTGGATTATTATTGTGATTTTCTGTCAGGAAGTCTTCAAGAGAGTGAAAATGCTATCACTGTTAATGCAGATCGTCTGAATTATGAAAGACAAATATCTGCTTCTCTCAGTCAAGCGTCAGTTGATGCTTTTAGGCAAGTTTTTCGCAATATTCAAAGTTTAGCTGATAAATATGCATGCAAGGGAAATTCTTTCCTTGCAATGTTTAAGGCTGGAAGCAAGGGTAATTTGCTGAAATTAGTTCAACATTCCATGTGCCTTGGCATGCAAAATTCTCTGGTCCGCTTGTCATACAGACTACCCCGTCATCTTTCATGTGCTGACTGGAATAGTCAAAAGTGGGTTGATTCAATCCAGATGTCTTCTGGTACCCTTGAATCTGTTCAGTCATACATTCCATATGCTGTAGTTGAAAGTTCTTTTTTAACTGGGTTGAATCCACTTGAATGTTTTGTTCATTCAGTGACAAATCGTGATAGCTCTTTCAGTGACCATGCGGACCTTCCTGGTACACTGACACGTAGACTTATGTTCTTCATGCGTGATTTGTATGATGCATATGATGGAACGGTGAGAAATTTATATGGTAATCAACTTATTCAGTTTTCTTATGATATTGAAGAGGACTCTTCATGCAATAAAGGTTTCCAGCAGTATGCTTTAGGTGGTGAATCAGTTGGGGCTATTTCTGCCTGTGCAATTTCTGAAGCTGCATACAGTGCTTTGGGTCAACCAGTTAGTCTACTCGAAACATCACCTTTGCTGAATTTGAAAAATGTTCTGGAGTGTGGTTCAAGGAAAAGAAATGGTGATCAGACTGTGTCTTTATTTTTGTCTGAAAAGCTTGGTAAACAGAGACATGGGTTTGAATATGCAGCTTTAGAAGTCAAGAATTATTTGGAAAGATTGTTGTTCTCAAACATTGTTTCTAAAGTGATGATAATATTCACCCCACATGACAGCAGGAGCCAAGAAAAATACAGTCCTTGGGTCTGCCACTTTCATTTAGACAAGGAAATTGTAACAAGAAGAAAATTGAAAGTGCATTCTATCATTGACTCTCTCTATCAGAGATATTACTCTCAGAGAAAAGACTCAAAAGTCTGTTTTACCAATTTGAAAATTTCAAGCAGGAAGTGTTCTGCTGATTCCATGGTTAAGGAAGGTGAAGACACTTCTATAGATAAAGAAGAGGGTGATGATTGCATCATGGTCACAATTGTTGAAAACTCTAAGAATCCTATACAACTGGATTCTGTTCGGGACTTGGTGATACCTTTTCTTCTAGGAACAGCAATACAAGGATTTCTGGATGTCAAGAAGGTTGATATTCTCTGGAATAATCAGTCAAAAGTAACAAATTCTCGTAATGGTTTTTCTGGTGAACTGTACTTGAGGGTAACTTTGTCCAGCGAGGGTAGCAGAGGAAGATTTTGGGGTGTCCTCCTAAAGCTTTGTCACAAGATAATGCATATAATTGACTGGACACGAAGTCATACAGATAACATCAATCATTTCTCATCAGCATATGGAATTGATGCAGGGTGGCAATACTTTTTCAATAGTTTGGCATGTGCAACATCTGATACCGGCAAGTCCATCCTTCCTAAGCATTTGTGTCTTGTTGCCAATAGTCTGTCATGTAGTGGAGAGTTTGTAGGATTAAATGCTAAAGGCATGGCACTACAAAGAAAACATGCGTCCGTTTCATCACCATTTGTGCAAGCATGCTTTGCGAATCCAGGTAGTTGCTTTATAAAAGCTGCTAAGTCTGGAGCCACGGATAATCTCCAGGGCAGCCTGGATGGGTTGGCTTGGGGAAACTGTCTATCTATGGGGACAAGTGGAATGTTTGATGTCATATATTCAGAGAAGGTAGCTAAGTCTGTAGATGTGTATGAGCTGCTAGAAGCCAGTTTTGACAAGCCGAACAATAAAATTGGTACTCATTTGCACAAATATTCATCTGACAAATGCGGTTCTGAGTTTAGGCATAAAAATGGTTATGCCTTGAAAGAGGGAAAACAGTGGAAAACCATTTTAAGAAATTTTGTGACAGTAAATGATATTCAGAAGCTGACTTTTGCATCGAGGTGCATATTGAACAAGTATTCAATTGATGAGCTGCTAAGTGAGAGTGACAGGTCAACAATGCTAAGGGTTTTGAATTTTCATCCTCATAAAAGTGAGAAGTTTGGCATTGGACCACAGGACATTAAGGTTGGATGGCATCCAAAATACAAGGATAGCCGGTGCTTCCATATAATAAGAACTGATGGGACGGTTGAAGATTTTTCATACCGCAAATGCATTCTTGGTGCTCTTGATATCGTTGATCCAAAAAAATCAAAGATCCAGGAGAAAAAATGGTCAGGACATGGTGACACGTAA

Predicted protein sequences of Glyma01g42480

Limit To All Plant Sequences

>Glyma01g42480.1   sequence type=predicted peptide   gene model=Glyma01g42480   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDDDLLQRNKTPSVVIKAIKFDVLTEEDIENISVLEINAAGQVTGSNLGLPNASDECATCGTKDKKFCEGHFGVIKFPTPILHPYFMLEIAHILNKICPVCKSIRHKSKGARLIYGTKRSNDCNYCSVYPSMQFRVSSNDLFRRTAIIVEVKASKKTLGTEIPADFWNFIPCDAQQEENYVNRRVLSPVQVNYLLNDVDPDFIEKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFRTVVVGDPDLELSEIGIPCHIAESLQVSEYVNRQNREKLLYCCELHLLEKGKINVCRKGSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSIHQHSMISLTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISNKRLIPPAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSYARENMIEEIFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISASLSQASVDAFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQNSLVRLSYRLPRHLSCADWNSQKWVDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDHADLPGTLTRRLMFFMRDLYDAYDGTVRNLYGNQLIQFSYDIEEDSSCNKGFQQYALGGESVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFLSEKLGKQRHGFEYAALEVKNYLERLLFSNIVSKVMIIFTPHDSRSQEKYSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSRKCSADSMVKEGEDTSIDKEEGDDCIMVTIVENSKNPIQLDSVRDLVIPFLLGTAIQGFLDVKKVDILWNNQSKVTNSRNGFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNINHFSSAYGIDAGWQYFFNSLACATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQRKHASVSSPFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSEKGHQVAKSVDVYELLEASFDKPNNKIGTHLHKYSSDKCGSEFRHKNGYALKEGKQWKTILRNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGIGPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSKIQEKKWSGHGDT*

>Glyma01g42480.2   sequence type=predicted peptide   gene model=Glyma01g42480   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDDDLLQRNKTPSVVIKAIKFDVLTEEDIENISVLEINAAGQVTGSNLGLPNASDECATCGTKDKKFCEGHFGVIKFPTPILHPYFMLEIAHILNKICPVCKSIRHKSKGARLIYGTKRSNDCNYCSVYPSMQFRVSSNDLFRRTAIIVEVKASKKTLGTEIPADFWNFIPCDAQQEENYVNRRVLSPVQVNYLLNDVDPDFIEKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFRTVVVGDPDLELSEIGIPCHIAESLQVSEYVNRQNREKLLYCCELHLLEKGKINVCRKGSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSIHQHSMISLTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISNKRLIPPAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSYARENMIEEIFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISASLSQASVDAFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQNSLVRLSYRLPRHLSCADWNSQKWVDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDHADLPGTLTRRLMFFMRDLYDAYDGTVRNLYGNQLIQFSYDIEEDSSCNKGFQQYALGGESVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFLSEKLGKQRHGFEYAALEVKNYLERLLFSNIVSKVMIIFTPHDSRSQEKYSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSRKCSADSMVKEGEDTSIDKEEGDDCIMVTIVENSKNPIQLDSVRDLVIPFLLGTAIQGFLDVKKVDILWNNQSKVTNSRNGFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNINHFSSAYGIDAGWQYFFNSLACATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQRKHASVSSPFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSEKVAKSVDVYELLEASFDKPNNKIGTHLHKYSSDKCGSEFRHKNGYALKEGKQWKTILRNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGIGPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSKIQEKKWSGHGDT*

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