|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G47240 | AT | Annotation by Michelle Graham. TAIR10: nudix hydrolase homolog 8 | chr5:19183806-19185467 FORWARD LENGTH=369 | SoyBase | E_val: 8.00E-28 | ISS |
GO:0009611 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to wounding | SoyBase | N/A | ISS |
GO:0005829 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosol | SoyBase | N/A | ISS |
GO:0016787 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: hydrolase activity | SoyBase | N/A | ISS |
PTHR13994 | Panther | NUDIX HYDROLASE RELATED | JGI | ISS | |
PTHR13994:SF2 | Panther | MUTT DOMAIN PROTEIN | JGI | ISS | |
UniRef100_B9SZQ2 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Mutt domain protein, putative n=1 Tax=Ricinus communis RepID=B9SZQ2_RICCO | SoyBase | E_val: 2.00E-32 | ISS |
UniRef100_UPI00023379E3 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI00023379E3 related cluster n=1 Tax=unknown RepID=UPI00023379E3 | SoyBase | E_val: 1.00E-49 | ISS |
Glyma01g41542 not represented in the dataset |
Glyma01g41542 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.01g206900 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma01g41542.1 sequence type=CDS gene model=Glyma01g41542 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGACACCCGTCTCCGTGTGATTGGTGATCCCATGAATGGAGTTCAACGGTTAAGACCCCTGTCAGCTGAGACCATTGTTGATGATCCTGAAATTGAAGCTGCAAAGTGGATGCCTCAAGTTGAGTTTGTAGAACAACCATTTATCCAAGAAGATTCTATGTTCAAGAAGATAATAGATATCTGCATGGCTTGTCTCGAGAAGCATTATTGTGGCCTAACTTCTCATCAAATGGTTTCAAAATGTGATGGCAAGTTATCTTCCCTGTACTATAATTTCATCAACATGGAAGATATATATCAACTGTATTGGCAGTTAAATTAA
>Glyma01g41542.1 sequence type=predicted peptide gene model=Glyma01g41542 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MDTRLRVIGDPMNGVQRLRPLSAETIVDDPEIEAAKWMPQVEFVEQPFIQEDSMFKKIIDICMACLEKHYCGLTSHQMVSKCDGKLSSLYYNFINMEDIYQLYWQLN*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||