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Report for Sequence Feature Glyma01g41430
Feature Type: gene_model
Chromosome: Gm01
Start: 52931069
stop: 52933636
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma01g41430
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G35660 AT
Annotation by Michelle Graham. TAIR10: FAD/NAD(P)-binding oxidoreductase family protein | chr2:14988499-14990320 FORWARD LENGTH=439
SoyBase E_val: 0 ISS
GO:0008152 GO-bp
Annotation by Michelle Graham. GO Biological Process: metabolic process
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0004497 GO-mf
Annotation by Michelle Graham. GO Molecular Function: monooxygenase activity
SoyBase N/A ISS
GO:0016491 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity
SoyBase N/A ISS
KOG2614
KOG
Kynurenine 3-monooxygenase and related flavoprotein monooxygenases
JGI ISS
PTHR13789 Panther
MONOOXYGENASE
JGI ISS
PTHR13789:SF6 Panther
gb def: putative oxidoreductase [streptomyces coelicolor a3(2)]
JGI ISS
PF01494 PFAM
FAD binding domain
JGI ISS
UniRef100_G7JXH2 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Zeaxanthin epoxidase n=1 Tax=Medicago truncatula RepID=G7JXH2_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1J9R9 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1J9R9_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma01g41430
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma01g41430
Paralog Evidence Comments
Glyma11g03990 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma01g41430 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.01g205700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma01g41430
Transcripts of Glyma01g41430
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma01g41430.4 sequence type=transcript gene model=Glyma01g41430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
TTTAGATTTAAGAAACATTGACCACTAGTTTTTATGGTCCAAGGCTGGACACTACGCACCCCTATCTTTCCACGACCGTAATGCATATGATATGGCGTGGCTGCAATCAATCACAACAGAACTGAACATATCATGGCTACAACAACAACCTCGTCTTTTGCCTTTCTGAAATCTCACACTCACACCAAAACATTGTTCACCCGCAGAAGCTACAAAGCCATAAAGGCTCAATCTCAAACTGATGTCCGAGAGGAACAAGTCGTGGTAGTGGGTGCTGGGATCGCGGGCCTTGCAACTGCTCTGTCCCTTCATAGGCTTGGAGTTCGGTCCCTGGTGCTGGAGCAGGCACAGTCACTTCGAACAGGTGGAACTTCACTCACCCTTTTCAAAAACGGATGGAGGGTGCTCGATGCAATTGGAGTAGCTAATGACCTCAGAACTCAATTCTTAGAAATTCAAGGCTGTACAGGATGGTGGTGAAGTCCGTGGATGGGAGGGAACTACGCGCCTTCAATTTCAAACAAGAGGATCCAAGCCAAGAGGTACGTGCAGTGGAGAGGAGAGTGCTTTTGGAAACCTTGGCTAGTCAGCTACCTCGGGATACCATTCAATATTCTTCACAATTACAGAGGATTGAAGCCACTCCAAACGGGGATACCTTGTTGGAACTTGTGGATGGGTCTAAGCTGCTTGCAAAGATTGTGATAGGGTGCGATGGGATTCGATCACCAATAGCTAAGTGGATGGGGTTTCCTGAGCCAAAGTATGTTGGTCATTGTGCTTTCCGTGGACTTGCGTCTTATTCAGATGGACAACCTTTTGGACCAAGAGTGAATTACATCTACGGAAGAGGGTTGCGCGCTGGATTTGTTCCTGTTTCTCCAACCAAAGTTTACTGGTTCATCTGCTTCAATAGTCCATCTGCAGGTCCAAAAATAACTGATTCATTGGAGCTGAAGAAGCAAGCTAAGGAACTGGTGAAGAATTGGCCTTCAGAGCTATTGAACATAGTGGATTCTACGCCGGATGACACTGTCATTAAGACTCCATTAGTAGATAGGTGGCTTTGGCCAGCCATAAGTCCTTCTGCTTCTGCAGGAAGAGTTGTGGTGGTTGGAGATGCATGGCATCCAATGACCCCAAATCTTGGGCAAGGAGCTTGTTGTGCACTTGAGGATTCAGTGGTTCTTGCTAAAAAGCTTGCCAGAGCCATCAATTCTGAAGACCCATCTGTGGAAGAAGCTTTCAGGTCATATGGCGCTGAAAGATGGCCCCGTGTATTTCCACTAACCATTCGTGCAAACCTCGTAGGTTCCGTTTTGCAGTGGGAGAACCCATTGGTGTGTTCTGTTAGGAACAATATTGTCATACCTAAGCTAGTCAGGCTCGGGCCATTGCTGGAGCATACAAATTTTACTTGTGAGGGTCTATAAAGAAGACAAAGCAAGGCTGGCAATGGCAAGCACAATGAAAGATGGAGTTGTCAGGGAATAGAGAGAGTTTCATTTCTGTTCAATATGGATACTGCATTTGATGGGTGTAAAGAGAGTTAGTTATGTTCGTTACTCAATAGGTTATAAACATTGTATTTAACCGATCCTTAATAAGTACATTCAACACTTTATGTGAACTTCTCCATTTTTCTGTTTCCTGATGATTGGCTTGCCAAAAGAAGATCTAGTATACTTTTACCAATTATTGGAGATTTAATAATTGA
>Glyma01g41430.5 sequence type=transcript gene model=Glyma01g41430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
AAGAAACATTGACCACTAGTTTTTATGGTCCAAGGCTGGACACTACGCACCCCTATCTTTCCACGACCGTAATGCATATGATATGGCGTGGCTGCAATCAATCACAACAGAACTGAACATATCATGGCTACAACAACAACCTCGTCTTTTGCCTTTCTGAAATCTCACACTCACACCAAAACATTGTTCACCCGCAGAAGCTACAAAGCCATAAAGGCTCAATCTCAAACTGATGTCCGAGAGGAACAAGTCGTGGTAGTGGGTGCTGGGATCGCGGGCCTTGCAACTGCTCTGTCCCTTCATAGGCTTGGAGTTCGGTCCCTGGTGCTGGAGCAGGCACAGTCACTTCGAACAGGTGGAACTTCACTCACCCTTTTCAAAAACGGATGGAGGGTGCTCGATGCAATTGGAGTAGCTAATGACCTCAGAACTCAATTCTTAGAAATTCAAGGCTGAGCTTGATCTGGTTCACAATATCAGCTGTACAGGATGGTGGTGAAGTCCGTGGATGGGAGGGAACTACGCGCCTTCAATTTCAAACAAGAGGATCCAAGCCAAGAGGTACGTGCAGTGGAGAGGAGAGTGCTTTTGGAAACCTTGGCTAGTCAGCTACCTCGGGATACCATTCAATATTCTTCACAATTACAGAGGATTGAAGCCACTCCAAACGGGGATACCTTGTTGGAACTTGTGGATGGGTCTAAGCTGCTTGCAAAGATTGTGATAGGGTGCGATGGGATTCGATCACCAATAGCTAAGTGGATGGGGTTTCCTGAGCCAAAGTATGTTGGTCATTGTGCTTTCCGTGGACTTGCGTCTTATTCAGATGGACAACCTTTTGGACCAAGAGTGAATTACATCTACGGAAGAGGGTTGCGCGCTGGATTTGTTCCTGTTTCTCCAACCAAAGTTTACTGGTTCATCTGCTTCAATAGTCCATCTGCAGGTCCAAAAATAACTGATTCATTGGAGCTGAAGAAGCAAGCTAAGGAACTGGTGAAGAATTGGCCTTCAGAGCTATTGAACATAGTGGATTCTACGCCGGATGACACTGTCATTAAGACTCCATTAGTAGATAGGTGGCTTTGGCCAGCCATAAGTCCTTCTGCTTCTGCAGGAAGAGTTGTGGTGGTTGGAGATGCATGGCATCCAATGACCCCAAATCTTGGGCAAGGAGCTTGTTGTGCACTTGAGGATTCAGTGGTTCTTGCTAAAAAGCTTGCCAGAGCCATCAATTCTGAAGACCCATCTGTGGAAGAAGCTTTCAGGTCATATGGCGCTGAAAGATGGCCCCGTGTATTTCCACTAACCATTCGTGCAAACCTCGTAGGTTCCGTTTTGCAGTGGGAGAACCCATTGGTGTGTTCTGTTAGGAACAATATTGTCATACCTAAGCTAGTCAGGCTCGGGCCATTGCTGGAGCATACAAATTTTACTTGTGAGGGTCTATAAAGAAGACAAAGCAAGGCTGGCAATGGCAAGCACAATGAAAGATGGAGTTGTCAGGGAATAGAGAGAGTTTCATTTCTGTTCAATATGGATACTGCATTTGATGGGTGTAAAGAGAGTTAGTTATGTTCGTTACTCAATAGGTTATAAACATTGTATTTAACCGATCCTTAATAAGTACATTCAACACTTTATGTGAACTTCTCCATTTTTCTGTTTCCTGATGATTGGCTTGCCAAAAGAAGATCTAGTATACTTTTACCAATTATTGGAGATTTAATAATTGAATCACTTGAGATTTTGCTTAGTGAAAAACAATACAGTACCTCTGATA
Coding sequences of Glyma01g41430
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma01g41430.1 sequence type=CDS gene model=Glyma01g41430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCTACAACAACAACCTCGTCTTTTGCCTTTCTGAAATCTCACACTCACACCAAAACATTGTTCACCCGCAGAAGCTACAAAGCCATAAAGGCTCAATCTCAAACTGATGTCCGAGAGGAACAAGTCGTGGTAGTGGGTGCTGGGATCGCGGGCCTTGCAACTGCTCTGTCCCTTCATAGGCTTGGAGTTCGGTCCCTGGTGCTGGAGCAGGCACAGTCACTTCGAACAGGTGGAACTTCACTCACCCTTTTCAAAAACGGATGGAGGGTGCTCGATGCAATTGGAGTAGCTAATGACCTCAGAACTCAATTCTTAGAAATTCAAGGGATGGTGGTGAAGTCCGTGGATGGGAGGGAACTACGCGCCTTCAATTTCAAACAAGAGGATCCAAGCCAAGAGGTACGTGCAGTGGAGAGGAGAGTGCTTTTGGAAACCTTGGCTAGTCAGCTACCTCGGGATACCATTCAATATTCTTCACAATTACAGAGGATTGAAGCCACTCCAAACGGGGATACCTTGTTGGAACTTGTGGATGGGTCTAAGCTGCTTGCAAAGATTGTGATAGGGTGCGATGGGATTCGATCACCAATAGCTAAGTGGATGGGGTTTCCTGAGCCAAAGTATGTTGGTCATTGTGCTTTCCGTGGACTTGCGTCTTATTCAGATGGACAACCTTTTGGACCAAGAGTGAATTACATCTACGGAAGAGGGTTGCGCGCTGGATTTGTTCCTGTTTCTCCAACCAAAGTTTACTGGTTCATCTGCTTCAATAGTCCATCTGCAGGTCCAAAAATAACTGATTCATTGGAGCTGAAGAAGCAAGCTAAGGAACTGGTGAAGAATTGGCCTTCAGAGCTATTGAACATAGTGGATTCTACGCCGGATGACACTGTCATTAAGACTCCATTAGTAGATAGGTGGCTTTGGCCAGCCATAAGTCCTTCTGCTTCTGCAGGAAGAGTTGTGGTGGTTGGAGATGCATGGCATCCAATGACCCCAAATCTTGGGCAAGGAGCTTGTTGTGCACTTGAGGATTCAGTGGTTCTTGCTAAAAAGCTTGCCAGAGCCATCAATTCTGAAGACCCATCTGTGGAAGAAGCTTTCAGGTCATATGGCGCTGAAAGATGGCCCCGTGTATTTCCACTAACCATTCGTGCAAACCTCGTAGGTTCCGTTTTGCAGTGGGAGAACCCATTGGTGTGTTCTGTTAGGAACAATATTGTCATACCTAAGCTAGTCAGGCTCGGGCCATTGCTGGAGCATACAAATTTTACTTGTGAGGGTCTATAA
>Glyma01g41430.4 sequence type=CDS gene model=Glyma01g41430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGGTGAAGTCCGTGGATGGGAGGGAACTACGCGCCTTCAATTTCAAACAAGAGGATCCAAGCCAAGAGGTACGTGCAGTGGAGAGGAGAGTGCTTTTGGAAACCTTGGCTAGTCAGCTACCTCGGGATACCATTCAATATTCTTCACAATTACAGAGGATTGAAGCCACTCCAAACGGGGATACCTTGTTGGAACTTGTGGATGGGTCTAAGCTGCTTGCAAAGATTGTGATAGGGTGCGATGGGATTCGATCACCAATAGCTAAGTGGATGGGGTTTCCTGAGCCAAAGTATGTTGGTCATTGTGCTTTCCGTGGACTTGCGTCTTATTCAGATGGACAACCTTTTGGACCAAGAGTGAATTACATCTACGGAAGAGGGTTGCGCGCTGGATTTGTTCCTGTTTCTCCAACCAAAGTTTACTGGTTCATCTGCTTCAATAGTCCATCTGCAGGTCCAAAAATAACTGATTCATTGGAGCTGAAGAAGCAAGCTAAGGAACTGGTGAAGAATTGGCCTTCAGAGCTATTGAACATAGTGGATTCTACGCCGGATGACACTGTCATTAAGACTCCATTAGTAGATAGGTGGCTTTGGCCAGCCATAAGTCCTTCTGCTTCTGCAGGAAGAGTTGTGGTGGTTGGAGATGCATGGCATCCAATGACCCCAAATCTTGGGCAAGGAGCTTGTTGTGCACTTGAGGATTCAGTGGTTCTTGCTAAAAAGCTTGCCAGAGCCATCAATTCTGAAGACCCATCTGTGGAAGAAGCTTTCAGGTCATATGGCGCTGAAAGATGGCCCCGTGTATTTCCACTAACCATTCGTGCAAACCTCGTAGGTTCCGTTTTGCAGTGGGAGAACCCATTGGTGTGTTCTGTTAGGAACAATATTGTCATACCTAAGCTAGTCAGGCTCGGGCCATTGCTGGAGCATACAAATTTTACTTGTGAGGGTCTATAA
>Glyma01g41430.5 sequence type=CDS gene model=Glyma01g41430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGGTGAAGTCCGTGGATGGGAGGGAACTACGCGCCTTCAATTTCAAACAAGAGGATCCAAGCCAAGAGGTACGTGCAGTGGAGAGGAGAGTGCTTTTGGAAACCTTGGCTAGTCAGCTACCTCGGGATACCATTCAATATTCTTCACAATTACAGAGGATTGAAGCCACTCCAAACGGGGATACCTTGTTGGAACTTGTGGATGGGTCTAAGCTGCTTGCAAAGATTGTGATAGGGTGCGATGGGATTCGATCACCAATAGCTAAGTGGATGGGGTTTCCTGAGCCAAAGTATGTTGGTCATTGTGCTTTCCGTGGACTTGCGTCTTATTCAGATGGACAACCTTTTGGACCAAGAGTGAATTACATCTACGGAAGAGGGTTGCGCGCTGGATTTGTTCCTGTTTCTCCAACCAAAGTTTACTGGTTCATCTGCTTCAATAGTCCATCTGCAGGTCCAAAAATAACTGATTCATTGGAGCTGAAGAAGCAAGCTAAGGAACTGGTGAAGAATTGGCCTTCAGAGCTATTGAACATAGTGGATTCTACGCCGGATGACACTGTCATTAAGACTCCATTAGTAGATAGGTGGCTTTGGCCAGCCATAAGTCCTTCTGCTTCTGCAGGAAGAGTTGTGGTGGTTGGAGATGCATGGCATCCAATGACCCCAAATCTTGGGCAAGGAGCTTGTTGTGCACTTGAGGATTCAGTGGTTCTTGCTAAAAAGCTTGCCAGAGCCATCAATTCTGAAGACCCATCTGTGGAAGAAGCTTTCAGGTCATATGGCGCTGAAAGATGGCCCCGTGTATTTCCACTAACCATTCGTGCAAACCTCGTAGGTTCCGTTTTGCAGTGGGAGAACCCATTGGTGTGTTCTGTTAGGAACAATATTGTCATACCTAAGCTAGTCAGGCTCGGGCCATTGCTGGAGCATACAAATTTTACTTGTGAGGGTCTATAA
Predicted protein sequences of Glyma01g41430
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma01g41430.1 sequence type=predicted peptide gene model=Glyma01g41430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MATTTTSSFAFLKSHTHTKTLFTRRSYKAIKAQSQTDVREEQVVVVGAGIAGLATALSLHRLGVRSLVLEQAQSLRTGGTSLTLFKNGWRVLDAIGVANDLRTQFLEIQGMVVKSVDGRELRAFNFKQEDPSQEVRAVERRVLLETLASQLPRDTIQYSSQLQRIEATPNGDTLLELVDGSKLLAKIVIGCDGIRSPIAKWMGFPEPKYVGHCAFRGLASYSDGQPFGPRVNYIYGRGLRAGFVPVSPTKVYWFICFNSPSAGPKITDSLELKKQAKELVKNWPSELLNIVDSTPDDTVIKTPLVDRWLWPAISPSASAGRVVVVGDAWHPMTPNLGQGACCALEDSVVLAKKLARAINSEDPSVEEAFRSYGAERWPRVFPLTIRANLVGSVLQWENPLVCSVRNNIVIPKLVRLGPLLEHTNFTCEGL*
>Glyma01g41430.4 sequence type=predicted peptide gene model=Glyma01g41430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVVKSVDGRELRAFNFKQEDPSQEVRAVERRVLLETLASQLPRDTIQYSSQLQRIEATPNGDTLLELVDGSKLLAKIVIGCDGIRSPIAKWMGFPEPKYVGHCAFRGLASYSDGQPFGPRVNYIYGRGLRAGFVPVSPTKVYWFICFNSPSAGPKITDSLELKKQAKELVKNWPSELLNIVDSTPDDTVIKTPLVDRWLWPAISPSASAGRVVVVGDAWHPMTPNLGQGACCALEDSVVLAKKLARAINSEDPSVEEAFRSYGAERWPRVFPLTIRANLVGSVLQWENPLVCSVRNNIVIPKLVRLGPLLEHTNFTCEGL*
>Glyma01g41430.5 sequence type=predicted peptide gene model=Glyma01g41430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVVKSVDGRELRAFNFKQEDPSQEVRAVERRVLLETLASQLPRDTIQYSSQLQRIEATPNGDTLLELVDGSKLLAKIVIGCDGIRSPIAKWMGFPEPKYVGHCAFRGLASYSDGQPFGPRVNYIYGRGLRAGFVPVSPTKVYWFICFNSPSAGPKITDSLELKKQAKELVKNWPSELLNIVDSTPDDTVIKTPLVDRWLWPAISPSASAGRVVVVGDAWHPMTPNLGQGACCALEDSVVLAKKLARAINSEDPSVEEAFRSYGAERWPRVFPLTIRANLVGSVLQWENPLVCSVRNNIVIPKLVRLGPLLEHTNFTCEGL*