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Report for Sequence Feature Glyma01g37350

Feature Type:gene_model
Chromosome:Gm01
Start:49711600
stop:49713520
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma01g37350
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G29490AT Annotation by Michelle Graham. TAIR10: Metallopeptidase M24 family protein | chr4:14487943-14491321 FORWARD LENGTH=486 SoyBaseE_val: 6.00E-34ISS
GO:0009987GO-bp Annotation by Michelle Graham. GO Biological Process: cellular process SoyBaseN/AISS
GO:0004177GO-mf Annotation by Michelle Graham. GO Molecular Function: aminopeptidase activity SoyBaseN/AISS
GO:0030145GO-mf Annotation by Michelle Graham. GO Molecular Function: manganese ion binding SoyBaseN/AISS
PTHR10804Panther PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P) JGI ISS
PTHR10804:SF17Panther PROLINE AMINOPEPTIDASE P JGI ISS
PF00557PFAM Metallopeptidase family M24 JGI ISS
UniRef100_B6TL64UniRef Annotation by Michelle Graham. Most informative UniRef hit: Xaa-Pro dipeptidase n=1 Tax=Zea mays RepID=B6TL64_MAIZE SoyBaseE_val: 1.00E-32ISS
UniRef100_I1K635UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1K635_SOYBN SoyBaseE_val: 8.00E-39ISS

Expression Patterns of Glyma01g37350
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma01g37350 not represented in the dataset
Glyma01g37350 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma01g37350 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma01g37350
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma01g37350
>Glyma01g37350.1   sequence type=CDS   gene model=Glyma01g37350   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TGCTTGATATGTAATGAATGGCAAAAGAAAAATAATAGAATCCTTTCTTCCCTCTATGAACTTATGGAGCCATCACAGAACTCACTGTTGCCTAAGATGCCATGGACACCAAATTGGACGGACTTCTTCAGAGACAAGGGAAAGTTGCAGAAAATCAAATCATGGAAACACATTTTATTGGGTAATGTTGATGTCCTGATGGCTGCACACTTGGGTGTTGTTTTTATGCCACAAGGTCTGGGGCATTTCCTTGGTATTGACACATTTGACCCTGGAGGCTACTTAAAGGGCCTGGAAAGAAGAAAGGAACCTGGATTAAAATCTTTGCGGACAATCATAGATCTCCAAGAAGGAATGGTTATCACTGTGGAGCCTGGCTGCTACTTTATTGATGCTTTTTGGATAATATTTTATCAACTCAACCGGGCAAATGTGTTAACTGCTCAGCACTTTCTTTGTTTGCACTCCTCAACCATTAATAGTTTCATACACGTT
Predicted protein sequences of Glyma01g37350
>Glyma01g37350.1   sequence type=predicted peptide   gene model=Glyma01g37350   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CLICNEWQKKNNRILSSLYELMEPSQNSLLPKMPWTPNWTDFFRDKGKLQKIKSWKHILLGNVDVLMAAHLGVVFMPQGLGHFLGIDTFDPGGYLKGLERRKEPGLKSLRTIIDLQEGMVITVEPGCYFIDAFWIIFYQLNRANVLTAQHFLCLHSSTINSFIHV






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