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Report for Sequence Feature Glyma01g37290
Feature Type: gene_model
Chromosome: Gm01
Start: 49639993
stop: 49643961
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma01g37290
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G66290 AT
Annotation by Michelle Graham. TAIR10: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:26477917-26479441 REVERSE LENGTH=202
SoyBase E_val: 2.00E-85 ISS
GO:0006499 GO-bp
Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
UniRef100_I1J8M7 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1J8M7_SOYBN
SoyBase E_val: 3.00E-146 ISS
UniRef100_Q75GJ4 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Expressed protein n=2 Tax=Oryza sativa RepID=Q75GJ4_ORYSJ
SoyBase E_val: 1.00E-65 ISS
Expression Patterns of Glyma01g37290
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma01g37290
Paralog Evidence Comments
Glyma11g08010 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma01g37290 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.01g167600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma01g37290
Transcripts of Glyma01g37290
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma01g37290.3 sequence type=transcript gene model=Glyma01g37290 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
CGTAATTGTCTTCCAAGCTTAACTTTACGGCAACGGGCAACCCATTCCCAATCGAAGGTTGTTGTCATTGAACACACTGTTCCTGCGACACGAATTCGTGATGAGAAGCATTTTCATTTCCTTCCCAAATTCGCCCGCACGTGAATGAGAGTTTCGGCTCAGAGATTGATTTTTGAGCTACGATTTCACACCGCATTGCCAAACATGGGTGCTTCAGAGTCTACTCTCTCAAGCGGAAAGACGCCAGATGACAAAATCACCACCATAACCGAGCGGTCGGAAGCCTCTGACCCTATCTTGGAGCGCCTTAAATATCTCAAAATTACACCGCCCATATTGACCTCACCCCCAACAGAGGGGACTTTAACTGATATTTTAGTGAGGAAGCCTTCGTCGTCCTCAGTTTCAGCTACAGTCAATCCGAAGGTTATACTGGAGCTCTTCTCAATATACCATGATTGGCAGGAGAAAAAGGCCCAAGAGATAAGCATAAGACAGGAGGAAATAGAAAACAAAATAGAAGTTGCAGATGCTCTAGCGATCAAACTTCTTCAGCGATATAATCATTCAACTTCTACAATGAAGACTGCCTCACAACATCTATCCGGAGGTAATTATCAGGCACAGTTCAAGCAATATTTGGAATACCGGGATTCTCAACTCTATAGTTTTTGTTTTACTTAAAACACACTTACCAATGCACATTCAGCTAAACTCACAATGAATTGACATTCAACCGAACATAACGCTCATTCAAACACACCTATAGGCAGTGACTAACACTGTAACATGTGTTTTTGTAATCTTTTAAACGAATTGAAAGGTAAATTTCCTCTTTCATTGTTTACAAGGATCACAAACTTGTAAAATCTTGATTCATTTGCATTTATGTCATAAATCACAATACTTTCATGTGGTATTCTATGATTGTATGTGGAAATTG
>Glyma01g37290.4 sequence type=transcript gene model=Glyma01g37290 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
CGTAATTGTCTTCCAAGCTTAACTTTACGGCAACGGGCAACCCATTCCCAATCGAAGGTTGTTGTCATTGAACACACTGTTCCTGCGACACGAATTCGTGATGAGAAGCATTTTCATTTCCTTCCCAAATTCGCCCGCACGTGAATGAGAGTTTCGGCTCAGAGATTGATTTTTGAGCTACGATTTCACACCGCATTGCCAAACATGGGTGCTTCAGAGTCTACTCTCTCAAGCGGAAAGACGCCAGATGACAAAATCACCACCATAACCGAGCGGTCGGAAGCCTCTGACCCTATCTTGGAGCGCCTTAAATATCTCAAAATTACACCGCCCATATTGACCTCACCCCCAACAGAGGGGACTTTAACTGATATTTTAGTGAGGAAGCCTTCGTCGTCCTCAGTTTCAGTCAATCCGAAGGTTATACTGGAGCTCTTCTCAATATACCATGATTGGCAGGAGAAAAAGGCCCAAGAGATAAGCATAAGACAGGAGGAAATAGAAAACAAAATAGAAGTTGCAGATGCTCTAGCGATCAAACTTCTTCAGCGATATAATCATTCAACTTCTACAATGAAGACTGCCTCACAACATCTATCCGGAGTTCATTCATTGCAGGTGGAAATTGGAGAGCTCAAAGGAAGGTTGACTGAAGTTATCAGCAACTGTGATGCTTTGTGCAAGAGGATTGCAACAGAGGGTCCAGAATCTCTCGTGTCATCAATCAAACCTTTTGCAGTTACTACGGCTAATCAAGAAACCTACTCAAGTTCATCTAGTTTGCGGATAGTTTCAAAAACAAATCCACCTTCAGCAGAAGAATAGTTAGACCAACAGGATTGATTCTTGCTCATATTTTCAGAAGCTTCCTGCATTCTTATCGAATGAGGTGCTCGATAGTCTGAAGAACGGTTGGATCACATTCACTTGATAGACTAATTTTTTATTGGGACCATGTTTTGGAGGGCATGAAACTTCTCATTAATTGGGACCAAGTCATGGCAACCACAGAGCAACCCGGTCATGTTACAATGCTTCTATGAAAAGGAGCTATGATGCCCATCACCGACACGCACATATTGGGCTTGGTTGCTAATTTGAGGCAAAATAATGAAAGGACTTGATAACGGGCATGTGATCAGATCTAAAGAGATAACTTTTGTCTTTTTTTGGGTGGTTTTTTTTTTACAAGTTCACGTCATTGTTTTCGACGATCTCAGTTGCAGAATATTGCGGTAATTTCAGTATAAAATGAGCACGTGATCGTGTAATTCATTGTGTGCGACATGTTGCCATTGTCTTTAACGATGTTAAACAAAATAAAGATATATTTTCTTGTGTGCAAAATTGTTCATAAATAATTATGCACTCAAGTTTTATTGATGAAATGTCC
>Glyma01g37290.5 sequence type=transcript gene model=Glyma01g37290 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
CGTAATTGTCTTCCAAGCTTAACTTTACGGCAACGGGCAACCCATTCCCAATCGAAGGTTGTTGTCATTGAACACACTGTTCCTGCGACACGAATTCGTGATGAGAAGCATTTTCATTTCCTTCCCAAATTCGCCCGCACGTGAATGAGAGTTTCGGCTCAGAGATTGATTTTTGAGCTACGATTTCACACCGCATTGCCAAACATGGGTGCTTCAGAGTCTACTCTCTCAAGCGGAAAGACGCCAGATGACAAAATCACCACCATAACCGAGCGGTCGGAAGCCTCTGACCCTATCTTGGAGCGCCTTAAATATCTCAAAATTACACCGCCCATATTGACCTCACCCCCAACAGAGGGGACTTTAACTGATATTTTAGTGAGGAAGCCTTCGTCGTCCTCAGTTTCAGTCAATCCGAAGGTTATACTGGAGCTCTTCTCAATATACCATGATTGGCAGGAGAAAAAGGCCCAAGAGATAAGCATAAGACAGGAGGAAATAGAAAACAAAATAGAAGTTGCAGATGCTCTAGCGATCAAACTTCTTCAGCGATATAATCATTCAACTTCTACAATGAAGACTGCCTCACAACATCTATCCGGAGGTAATTATCAGGCACAGTTCAAGCAATATTTGGAATACCGGGATTCTCAACTCTATAGTTTTTGTTTTACTTAAAACACACTTACCAATGCACATTCAGCTAAACTCACAATGAATTGACATTCAACCGAACATAACGCTCATTCAAACACACCTATAGGCAGTGACTAACACTGTAACATGTGTTTTTGTAATCTTTTAAACGAATTGAAAGGTAAATTTCCTCTTTCATTGTTTACAAGGATCACAAACTTGTAAAATCTTGATTCATTTGCATTTATGTCATAAATCACAATACTTTCATGTGGTATTCTATGATTGTATGTGGAAATTG
Coding sequences of Glyma01g37290
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma01g37290.1 sequence type=CDS gene model=Glyma01g37290 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAGAGTTTCGGCTCAGAGATTGATTTTTGAGCTACGATTTCACACCGCATTGCCAAACATGGGTGCTTCAGAGTCTACTCTCTCAAGCGGAAAGACGCCAGATGACAAAATCACCACCATAACCGAGCGGTCGGAAGCCTCTGACCCTATCTTGGAGCGCCTTAAATATCTCAAAATTACACCGCCCATATTGACCTCACCCCCAACAGAGGGGACTTTAACTGATATTTTAGTGAGGAAGCCTTCGTCGTCCTCAGTTTCAGCTACAGTCAATCCGAAGGTTATACTGGAGCTCTTCTCAATATACCATGATTGGCAGGAGAAAAAGGCCCAAGAGATAAGCATAAGACAGGAGGAAATAGAAAACAAAATAGAAGTTGCAGATGCTCTAGCGATCAAACTTCTTCAGCGATATAATCATTCAACTTCTACAATGAAGACTGCCTCACAACATCTATCCGGAGTTCATTCATTGCAGGTGGAAATTGGAGAGCTCAAAGGAAGGTTGACTGAAGTTATCAGCAACTGTGATGCTTTGTGCAAGAGGATTGCAACAGAGGGTCCAGAATCTCTCGTGTCATCAATCAAACCTTTTGCAGTTACTACGGCTAATCAAGAAACCTACTCAAGTTCATCTAGTTTGCGGATAGTTTCAAAAACAAATCCACCTTCAGCAGAAGAATAG
>Glyma01g37290.3 sequence type=CDS gene model=Glyma01g37290 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAGAGTTTCGGCTCAGAGATTGATTTTTGAGCTACGATTTCACACCGCATTGCCAAACATGGGTGCTTCAGAGTCTACTCTCTCAAGCGGAAAGACGCCAGATGACAAAATCACCACCATAACCGAGCGGTCGGAAGCCTCTGACCCTATCTTGGAGCGCCTTAAATATCTCAAAATTACACCGCCCATATTGACCTCACCCCCAACAGAGGGGACTTTAACTGATATTTTAGTGAGGAAGCCTTCGTCGTCCTCAGTTTCAGCTACAGTCAATCCGAAGGTTATACTGGAGCTCTTCTCAATATACCATGATTGGCAGGAGAAAAAGGCCCAAGAGATAAGCATAAGACAGGAGGAAATAGAAAACAAAATAGAAGTTGCAGATGCTCTAGCGATCAAACTTCTTCAGCGATATAATCATTCAACTTCTACAATGAAGACTGCCTCACAACATCTATCCGGAGGTAATTATCAGGCACAGTTCAAGCAATATTTGGAATACCGGGATTCTCAACTCTATAGTTTTTGTTTTACTTAA
>Glyma01g37290.4 sequence type=CDS gene model=Glyma01g37290 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAGAGTTTCGGCTCAGAGATTGATTTTTGAGCTACGATTTCACACCGCATTGCCAAACATGGGTGCTTCAGAGTCTACTCTCTCAAGCGGAAAGACGCCAGATGACAAAATCACCACCATAACCGAGCGGTCGGAAGCCTCTGACCCTATCTTGGAGCGCCTTAAATATCTCAAAATTACACCGCCCATATTGACCTCACCCCCAACAGAGGGGACTTTAACTGATATTTTAGTGAGGAAGCCTTCGTCGTCCTCAGTTTCAGTCAATCCGAAGGTTATACTGGAGCTCTTCTCAATATACCATGATTGGCAGGAGAAAAAGGCCCAAGAGATAAGCATAAGACAGGAGGAAATAGAAAACAAAATAGAAGTTGCAGATGCTCTAGCGATCAAACTTCTTCAGCGATATAATCATTCAACTTCTACAATGAAGACTGCCTCACAACATCTATCCGGAGTTCATTCATTGCAGGTGGAAATTGGAGAGCTCAAAGGAAGGTTGACTGAAGTTATCAGCAACTGTGATGCTTTGTGCAAGAGGATTGCAACAGAGGGTCCAGAATCTCTCGTGTCATCAATCAAACCTTTTGCAGTTACTACGGCTAATCAAGAAACCTACTCAAGTTCATCTAGTTTGCGGATAGTTTCAAAAACAAATCCACCTTCAGCAGAAGAATAG
>Glyma01g37290.5 sequence type=CDS gene model=Glyma01g37290 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAGAGTTTCGGCTCAGAGATTGATTTTTGAGCTACGATTTCACACCGCATTGCCAAACATGGGTGCTTCAGAGTCTACTCTCTCAAGCGGAAAGACGCCAGATGACAAAATCACCACCATAACCGAGCGGTCGGAAGCCTCTGACCCTATCTTGGAGCGCCTTAAATATCTCAAAATTACACCGCCCATATTGACCTCACCCCCAACAGAGGGGACTTTAACTGATATTTTAGTGAGGAAGCCTTCGTCGTCCTCAGTTTCAGTCAATCCGAAGGTTATACTGGAGCTCTTCTCAATATACCATGATTGGCAGGAGAAAAAGGCCCAAGAGATAAGCATAAGACAGGAGGAAATAGAAAACAAAATAGAAGTTGCAGATGCTCTAGCGATCAAACTTCTTCAGCGATATAATCATTCAACTTCTACAATGAAGACTGCCTCACAACATCTATCCGGAGGTAATTATCAGGCACAGTTCAAGCAATATTTGGAATACCGGGATTCTCAACTCTATAGTTTTTGTTTTACTTAA
Predicted protein sequences of Glyma01g37290
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma01g37290.1 sequence type=predicted peptide gene model=Glyma01g37290 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MRVSAQRLIFELRFHTALPNMGASESTLSSGKTPDDKITTITERSEASDPILERLKYLKITPPILTSPPTEGTLTDILVRKPSSSSVSATVNPKVILELFSIYHDWQEKKAQEISIRQEEIENKIEVADALAIKLLQRYNHSTSTMKTASQHLSGVHSLQVEIGELKGRLTEVISNCDALCKRIATEGPESLVSSIKPFAVTTANQETYSSSSSLRIVSKTNPPSAEE*
>Glyma01g37290.3 sequence type=predicted peptide gene model=Glyma01g37290 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MRVSAQRLIFELRFHTALPNMGASESTLSSGKTPDDKITTITERSEASDPILERLKYLKITPPILTSPPTEGTLTDILVRKPSSSSVSATVNPKVILELFSIYHDWQEKKAQEISIRQEEIENKIEVADALAIKLLQRYNHSTSTMKTASQHLSGGNYQAQFKQYLEYRDSQLYSFCFT*
>Glyma01g37290.4 sequence type=predicted peptide gene model=Glyma01g37290 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MRVSAQRLIFELRFHTALPNMGASESTLSSGKTPDDKITTITERSEASDPILERLKYLKITPPILTSPPTEGTLTDILVRKPSSSSVSVNPKVILELFSIYHDWQEKKAQEISIRQEEIENKIEVADALAIKLLQRYNHSTSTMKTASQHLSGVHSLQVEIGELKGRLTEVISNCDALCKRIATEGPESLVSSIKPFAVTTANQETYSSSSSLRIVSKTNPPSAEE*
>Glyma01g37290.5 sequence type=predicted peptide gene model=Glyma01g37290 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MRVSAQRLIFELRFHTALPNMGASESTLSSGKTPDDKITTITERSEASDPILERLKYLKITPPILTSPPTEGTLTDILVRKPSSSSVSVNPKVILELFSIYHDWQEKKAQEISIRQEEIENKIEVADALAIKLLQRYNHSTSTMKTASQHLSGGNYQAQFKQYLEYRDSQLYSFCFT*