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Report for Sequence Feature Glyma01g35931

Feature Type:gene_model
Chromosome:Gm01
Start:48376296
stop:48378301
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma01g35931
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G45880AT Annotation by Michelle Graham. TAIR10: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:16869855-16871544 REVERSE LENGTH=345 SoyBaseE_val: 4.00E-32ISS
GO:0006355GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent SoyBaseN/AISS
GO:0008654GO-bp Annotation by Michelle Graham. GO Biological Process: phospholipid biosynthetic process SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
UniRef100_G7K2Q1UniRef Annotation by Michelle Graham. Most informative UniRef hit: JmjC domain-containing protein n=1 Tax=Medicago truncatula RepID=G7K2Q1_MEDTR SoyBaseE_val: 3.00E-42ISS
UniRef100_I1LIF0UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1LIF0_SOYBN SoyBaseE_val: 3.00E-56ISS

Expression Patterns of Glyma01g35931
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma01g35931 not represented in the dataset
Glyma01g35931 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma01g35931 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.01g155100 Wm82.a2.v1IGC As supplied by JGI

References for Glyma01g35931
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma01g35931
>Glyma01g35931.1   sequence type=CDS   gene model=Glyma01g35931   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAGGAGGAGAATCAGATAGAGGAACTGTGGAGGGAAGATACGGGAGAGTTTGATTTGGAACTTGAGAAGCCAACAAGGTATGTGCCTTGGTGCAGTGTGGATCCTTATCCTTCTCTGAGGACCATGGATGATGAGATGGCCAAGTTTCCCCTGTACTTCAATGGCCCTCGGCCGTTTGAATGTACTGTGAAGGCTGGCGAGGTTCTGTATTTAATTTCGATGGAAGTTATATTTTATGCAGGGTACCATATGCAGTTTGACATTAAGTACGCTTATTTCAACTTCTTACAGTCTATTCGATATCGATCTACTCCAAGTACAATGATAAATGATAAATTGTCTGAGGAGATAGATTCAGATTCTGCTTATTATGAATCTTGA
Predicted protein sequences of Glyma01g35931
>Glyma01g35931.1   sequence type=predicted peptide   gene model=Glyma01g35931   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKEENQIEELWREDTGEFDLELEKPTRYVPWCSVDPYPSLRTMDDEMAKFPLYFNGPRPFECTVKAGEVLYLISMEVIFYAGYHMQFDIKYAYFNFLQSIRYRSTPSTMINDKLSEEIDSDSAYYES*






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