|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G54100 | AT | Annotation by Michelle Graham. TAIR10: aldehyde dehydrogenase 7B4 | chr1:20195435-20198853 REVERSE LENGTH=508 | SoyBase | E_val: 2.00E-23 | ISS |
GO:0000303 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to superoxide | SoyBase | N/A | ISS |
GO:0008152 | GO-bp | Annotation by Michelle Graham. GO Biological Process: metabolic process | SoyBase | N/A | ISS |
GO:0009269 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to desiccation | SoyBase | N/A | ISS |
GO:0009651 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to salt stress | SoyBase | N/A | ISS |
GO:0009733 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to auxin stimulus | SoyBase | N/A | ISS |
GO:0009737 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to abscisic acid stimulus | SoyBase | N/A | ISS |
GO:0009743 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to carbohydrate stimulus | SoyBase | N/A | ISS |
GO:0009873 | GO-bp | Annotation by Michelle Graham. GO Biological Process: ethylene mediated signaling pathway | SoyBase | N/A | ISS |
GO:0015996 | GO-bp | Annotation by Michelle Graham. GO Biological Process: chlorophyll catabolic process | SoyBase | N/A | ISS |
GO:0055114 | GO-bp | Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0005829 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosol | SoyBase | N/A | ISS |
GO:0004028 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: 3-chloroallyl aldehyde dehydrogenase activity | SoyBase | N/A | ISS |
GO:0016491 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity | SoyBase | N/A | ISS |
PTHR11699 | Panther | ALDEHYDE DEHYDROGENASE-RELATED | JGI | ISS | |
PTHR11699:SF26 | Panther | UNCHARACTERIZED | JGI | ISS | |
PF00171 | PFAM | Aldehyde dehydrogenase family | JGI | ISS | |
UniRef100_I1MHH0 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MHH0_SOYBN | SoyBase | E_val: 5.00E-28 | ISS |
UniRef100_Q84P31 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Aldehyde dehydrogenase family 7 member A1 n=1 Tax=Glycine max RepID=Q84P31_SOYBN | SoyBase | E_val: 2.00E-27 | ISS |
Glyma01g27160 not represented in the dataset |
Glyma01g27160 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma01g27160.1 sequence type=CDS gene model=Glyma01g27160 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high CAGGGAGGGAGTATCCTAACATATGAATCTGTATTAGAGTCAAGAGAAAATTTTGTAGAACCAACAATTGTTGAAATTTCTCTAGATGCTCCTGTAGTTAAAGAAGAATTGTTTGGTCCAGTTCTGTATGTTATGAAATTTCAGACTCTGGAAGAAGCAATTGCCTTGAACAATTCTGTACCTCAAGGATTA
>Glyma01g27160.1 sequence type=predicted peptide gene model=Glyma01g27160 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high QGGSILTYESVLESRENFVEPTIVEISLDAPVVKEELFGPVLYVMKFQTLEEAIALNNSVPQGL
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||