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Report for Sequence Feature Glyma01g25806

Feature Type:gene_model
Chromosome:Gm01
Start:33911124
stop:33912252
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma01g25806
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G48440AT Annotation by Michelle Graham. TAIR10: FAD-dependent oxidoreductase family protein | chr5:19630209-19632588 REVERSE LENGTH=425 SoyBaseE_val: 8.00E-17ISS
GO:0055114GO-bp Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0016491GO-mf Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity SoyBaseN/AISS
UniRef100_G7KWY6UniRef Annotation by Michelle Graham. Most informative UniRef hit: D-amino acid dehydrogenase small subunit n=1 Tax=Medicago truncatula RepID=G7KWY6_MEDTR SoyBaseE_val: 7.00E-25ISS
UniRef100_I1KYY0UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1KYY0_SOYBN SoyBaseE_val: 2.00E-33ISS

Expression Patterns of Glyma01g25806
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma01g25806 not represented in the dataset
Glyma01g25806 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma01g25806 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma01g25806
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma01g25806
>Glyma01g25806.1   sequence type=CDS   gene model=Glyma01g25806   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTAAACAAAACCCCTGGGAGTGCTACGTGGGATCTTGCGTCAAGGAGCCATCAACTTTGGAAGACGCTGGTACAGAGCATAGAAGAGCAAGGTTTGGATCCTATGGTGGAGTTGAATTGGAAACAGTCTGGAAGCCTATTAATTGGTAGGACTAATGCTGAGTCAGACATGCTAAAAGGGAGGGTTAACTACTATGTGAGGCTGGGTTGA
Predicted protein sequences of Glyma01g25806
>Glyma01g25806.1   sequence type=predicted peptide   gene model=Glyma01g25806   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVNKTPGSATWDLASRSHQLWKTLVQSIEEQGLDPMVELNWKQSGSLLIGRTNAESDMLKGRVNYYVRLG*






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