Glyma01g25734 - SoyBase

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Report for Sequence Feature Glyma01g25734

Feature Type:	gene_model
Chromosome:	Gm01
Start:	33873562
stop:	33877219
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma01g25734

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
PTHR10492	Panther	HELICASE-RELATED	JGI		ISS
UniRef100_G7JLV8	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Helicase-like protein n=1 Tax=Medicago truncatula RepID=G7JLV8_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_UPI000233957A	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233957A related cluster n=1 Tax=unknown RepID=UPI000233957A	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma01g25734

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma01g25734 not represented in the dataset	Glyma01g25734 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma01g25734 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma01g25734

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma01g25734

Limit To All Plant Sequences

>Glyma01g25734.1   sequence type=CDS   gene model=Glyma01g25734   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCAAAAGAATGCACATGCAAATGCATGTACCTCAGGCTATTCTGACTTGGGTGATCAGGCCATGGAATGTAGACATTGCAATGCAAAAATGTGGTATGATGAAAGAATTTCAAAAGATAGAAATACAACAAGTCCAAAATTCACCTTATGTTGTGGAGATGGGAAAGTTGAGCTTCCATTATTACAAAGTCCACCGAAATATCTTGAACGACTTTTGTTTGATGGTAAAGCAAGTGATAGTAAAAATTATCAGTGTAACATACGGACATACAACATGATGTTTGCCTTTACGTCTGCTGGTATTAAGCTAGACAAATCAATTAATGAAAGCAGCTTATTACCAATGCTTGGAAAGCAACCAAAATTTTCACAATTGTATATCTTTGATACGCAGAATGAAGTTGAAAATAGAATTAATACAATGAGTCAACATGTTGAAATTCAACTAGAGATTGTTTCAACTTTAAGTCAAATGCTGGATGAGTACAATGTCCATGCAAAAAGTTTTAGAATGGCCAGGGACAGATTGACAGATAGTCAAGTCGATAATGTAAAATTGAGAATGATAGCTGCACGTGAGAAAGATGGTCGTACATACAATCTCCCAAATGTTTCTGAAGTTGCTGCTCTGATTGTTGGTGATTTTGATCCAGACTCAAGAAGGAATATTATTGTTGAAACTCAAAATGGAGAATTACAAAGAATCCATGAATTACACTCTAGCTATCTAGGACTCCAATACCCTTTACTCTTCCCTTATGGTGAAGATGGATATAGACCTGATATACTTCACCGTTGTACACCTAGCAGCAGAAAAAGGAAGAGAAATCGTCTAACGATGAGAGAGTGGTTTGCTTATAGACTACAGTCCAGATCAAATGAAGCACAAACTTTGTTGCATTCTAGAAAACTATTCCAACAATTCATTGTTGAAGCATACACGATGGTTGAGTCTGAAAGACTTAGCTACATTAGGAACAATAAAAAAAAACTTAGAGTTGACAAGTATTGTAGTTTACAAACATCATTGGATGCTGGAAGCAGTAAAGACTCTTCTAAAGGAAAAAGAGTGATTTTGCCGTCAACCTTTGTTGGCAGTCCACGCTATATGGACCTACTTTATTTTGATGGTATGGCAATATGCAGCCATGTGGGTTTTCCAAATCTTTTTATTACTTTAACCTGTAATCCAAATTGGCCTGAAATCCGTAGAGTACTTGCACCTTTGAATCTAAAAGCAGCAGATAGACCGGATCTTATCTCACGTGTTTTCAGATTGAAGTATGAGCAGATGCTTTTTGACTTAACAAAAAAACACCTGCTTGGAAAAGTAGTCGCATATAATAAATATCCATCTTCAGATGACATTGACCACATAATATCAGCAGAAATTCCTTCGCATGAAAATGACCCTGAACTCTATACATTAGTCCAAAATCATATGGTACATGGGCCATGTGGAATTCTCCAACCTAAGTCTCCATGTATGAAAGAAGGCAAGTGTAGCCGTTTTTACCCTAAAATGTTTCACCCTCAAATTTTTTTAGATTCAAATGGCTATCCAATCTATCCTAGAAGAAAAGATGGTCGTACCATTTCAAAGAATAGAGTTATTATTGATAATAGATATATAGTACCTTACAATGCAAAATTGCTAAGGAAATACCAAGCACATATAAATATTGAATGGTGTAATCAAAATACTTCCATTAAATATCTATTTAAATATATAAACAAAGGTTATGACAGAGTCACTGCTGTTGTTATTCATGATGCTAATGGTACACTTGAGAATGCTATCAGTCAAAATGATGAGATTAAAGAATATGTGGATTGCAGATCATGGAACCTTAGAAAGAAAGGCAATACAATTGGCAGGCTGATATGGGTTCCACCAACGACTAGTGAATTGGTTTATCTAAGAATGATGCTTACTGCATGCAAAGGAGCTACTTCATTTGAGGATATTAGAACAGTTGAAAATATTCTATATCCTACATATAGAGAAGCATGCTTTGCAATGGGTTTTTTGCAAGATGACAGAGAATTTGTGGAAGCAATCAAAGAAGCTAAGGACTGGGGTACAACTAATTATTTGAGGAAATTATTTGTGTTAATGCTATTATCAGGTGTCATTACTAAACCTGAAGAACTTTGGAGTCAGACATGGAATTGGTTAGCTGAAGACATTGCATATCATTATAAAAAAACAACTCTGAACACAGAATTACACATTGATGATGAGCAACTTAAAAATTTAACATTACTGGAAATTGAAAAACTTCTGCATGCTGAGCAACTTAAAAATTTAACATTACTGGAAATTGAAAAACTTCTGCATGCAAACCAAAAATCACTCAGAGACTATCCTACAATTTTCTGA

Predicted protein sequences of Glyma01g25734

Limit To All Plant Sequences

>Glyma01g25734.1   sequence type=predicted peptide   gene model=Glyma01g25734   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MQKNAHANACTSGYSDLGDQAMECRHCNAKMWYDERISKDRNTTSPKFTLCCGDGKVELPLLQSPPKYLERLLFDGKASDSKNYQCNIRTYNMMFAFTSAGIKLDKSINESSLLPMLGKQPKFSQLYIFDTQNEVENRINTMSQHVEIQLEIVSTLSQMLDEYNVHAKSFRMARDRLTDSQVDNVKLRMIAAREKDGRTYNLPNVSEVAALIVGDFDPDSRRNIIVETQNGELQRIHELHSSYLGLQYPLLFPYGEDGYRPDILHRCTPSSRKRKRNRLTMREWFAYRLQSRSNEAQTLLHSRKLFQQFIVEAYTMVESERLSYIRNNKKKLRVDKYCSLQTSLDAGSSKDSSKGKRVILPSTFVGSPRYMDLLYFDGMAICSHVGFPNLFITLTCNPNWPEIRRVLAPLNLKAADRPDLISRVFRLKYEQMLFDLTKKHLLGKVVAYNKYPSSDDIDHIISAEIPSHENDPELYTLVQNHMVHGPCGILQPKSPCMKEGKCSRFYPKMFHPQIFLDSNGYPIYPRRKDGRTISKNRVIIDNRYIVPYNAKLLRKYQAHINIEWCNQNTSIKYLFKYINKGYDRVTAVVIHDANGTLENAISQNDEIKEYVDCRSWNLRKKGNTIGRLIWVPPTTSELVYLRMMLTACKGATSFEDIRTVENILYPTYREACFAMGFLQDDREFVEAIKEAKDWGTTNYLRKLFVLMLLSGVITKPEELWSQTWNWLAEDIAYHYKKTTLNTELHIDDEQLKNLTLLEIEKLLHAEQLKNLTLLEIEKLLHANQKSLRDYPTIF*

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