Report for Sequence Feature Glyma01g24670
Feature Type: gene_model
Chromosome: Gm01
Start: 32220915
stop: 32223882
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma01g24670
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G55550 AT
Annotation by Michelle Graham. TAIR10: Concanavalin A-like lectin protein kinase family protein | chr3:20600019-20602073 REVERSE LENGTH=684
SoyBase E_val: 0 ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
KOG1187
KOG
Serine/threonine protein kinase
JGI ISS
PTHR24420 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24420:SF435 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00069 PFAM
Protein kinase domain
JGI ISS
PF00139 PFAM
Legume lectin domain
JGI ISS
UniRef100_I1J6Y3 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1J6Y3_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q6UY58 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Lectin-like receptor kinase 7;3 n=1 Tax=Medicago truncatula RepID=Q6UY58_MEDTR
SoyBase E_val: 0 ISS
Expression Patterns of Glyma01g24670
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma01g24670
Paralog Evidence Comments
Glyma03g12120 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma01g24670 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.01g101000 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma01g24670
Coding sequences of Glyma01g24670
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma01g24670.1 sequence type=CDS gene model=Glyma01g24670 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCCACCAAACTCAACATGCTCCTCAAGCTCCTGCCTTTGTTGGTGTTCCTTCTGATCCCAGTTTCATCTCAGCCAAACCAGCTCTTCTATGCTGGATTCAAGGGTCTGGGAAGCAACAACATGACCCTTGATGGGGTTGCAGAAATAGAGCCAAATGGGGTACTGAAACTCACAAATGATTCAAGTAAAGTGATGGGTCATGCTTTTTATCCAACCCCTTTTCGGTTCAAGAACTCTAGTGGTGGTAAAGCTTTCTCCTTTTCTTCCTCTTTTGCTTTGGCTATTGTTCCTGAGTTTCCAAAGCTAGGAGGGCATGGCCTTGCTTTTACAATTGCTCCTTCTAAGGATCTGAAGGCTCATCCAAGCCAATATCTTGGTATTCTTGACTCAAGTAACATAGGGAACTTCTCCAACCACCTCTTTGCTGTTGAGTTTGACACAGCAAAGGATTTTGAGTTTGGGGACATTGATGACAACCATGTTGGAATTGACATCAATAGCTTGGCCTCCAATGCCTCTGCATCTGCAGGTTACTACACTGGGGATGATGATTCAAGCAAACAGAATCTCACCCTCCAAAGTAGGGTACCTATTCTAGCTTGGGTTGATTATGATGCTGCTAAAAGTGTGGTCCATGTCACGATTTCTGCATCTTCTACCAAACCCAAAAGGCCACTCTTGTCCTATCATGTGGATCTTTCACCAATCCTTAAGGAATCCATGTATGTTGGGTTCTCTGCATCAACAGGGTTGCTTGCTAGCTCCCATTACATCTTGGGATGGAGCTTCAAAATCAATGGGCCAGCTCCACCCCTTGATCTCTCTTCTCTCCCACAGCTTCCAGGGCCAAAGAAGAAACACACATCTCTGATAATTGGGGTTTCAGTCTCTGTTGTTGTTCTTGCATTGTGTGCTGTCTTATTTGGCATCTACATGTACAGAAGGTACAAGAATGCTGATGTCATAGAAGCTTGGGAGCTTGAGATTGGGCCACATAGGTACTCCTACCAAGAGCTCAAGAAAGCAACAAAAGGGTTCAAGGACAAAGAGCTGCTTGGACAAGGTGGGTTTGGGAGTGTTTACAAAGGAACATTGCCAAATTCCAATACCCAGGTTGCTGTTAAGAGAATTTCACATGACTCCAATCAAGGCCTGAGGGAATTTGTATCAGAAATAGCCAGCATAGGCCGGCTTCGCCACCGGAATTTGGTTCAGTTGCTGGGGTGGTGTCGCCGCCTGGGTGACCTCCTCCTTGTGTATGATTTCATGGAAAATGGGAGCTTAGACAAGTACTTGTTTAACGAGCCAGAAACAATCCTAAGTTGGGAGCAAAGGTTTAAGGTCATCAAGGATGTTGCTTCAGCCCTTTTGTATCTTCACGAGGGCTATGAGCAGGTGGTGATACATAGAGATGTGAAGGCTAGCAATGTGCTTCTAGACGGTGAACTCAATGGAAGACTAGGAGATTTTGGATTAGCAAGGTTGTATGAACATGGGACTAATCCAAGTACCACAAGGGTGGTGGGGACCTTGGGCTATTTGGCACCTGAGGTGCCTAGGACAGGGAAGGCCACTCCTAGCTCAGATGTTTTTGCATTTGGTGCACTTTTACTAGAGGTGGCATGTGGGCTAAGACCACTTGAGCCAAAGGCAATGCCAGAAGATATGGTTTTGGTTGATTGTGTGTGGAACAAATTCAAACAAGGGAGAATACTCAATATGGTGGACCCTAAACTAAATGGTGTTTTTAATGAAAGAGAGATGCTCATGGTGTTGAAATTGGGGCTTCTGTGTTCAAATGGTTCACCCACTGCTAGGCCTAGCATGAGACAGGTGGTGAGGTTTTTGGAAGGAGAAGTTGGTGTGCCAGATGAGTTGAGAAAGCCGGGAGAGGGAGGTTACCAGGAGGGTTTTGATGAATTCTTGCACTCACTTGAATCTTCTTCGTTTGATCAGATGAACACAGGTTCCTATGGTAGAAACAGAGACATGGATTCTAGTTTTCCATCTTTAACTGGTACATCTCTTTTTAGTCCCCATGGTAAAGGACAAACAATGTGA
Predicted protein sequences of Glyma01g24670
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma01g24670.1 sequence type=predicted peptide gene model=Glyma01g24670 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MATKLNMLLKLLPLLVFLLIPVSSQPNQLFYAGFKGLGSNNMTLDGVAEIEPNGVLKLTNDSSKVMGHAFYPTPFRFKNSSGGKAFSFSSSFALAIVPEFPKLGGHGLAFTIAPSKDLKAHPSQYLGILDSSNIGNFSNHLFAVEFDTAKDFEFGDIDDNHVGIDINSLASNASASAGYYTGDDDSSKQNLTLQSRVPILAWVDYDAAKSVVHVTISASSTKPKRPLLSYHVDLSPILKESMYVGFSASTGLLASSHYILGWSFKINGPAPPLDLSSLPQLPGPKKKHTSLIIGVSVSVVVLALCAVLFGIYMYRRYKNADVIEAWELEIGPHRYSYQELKKATKGFKDKELLGQGGFGSVYKGTLPNSNTQVAVKRISHDSNQGLREFVSEIASIGRLRHRNLVQLLGWCRRLGDLLLVYDFMENGSLDKYLFNEPETILSWEQRFKVIKDVASALLYLHEGYEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYEHGTNPSTTRVVGTLGYLAPEVPRTGKATPSSDVFAFGALLLEVACGLRPLEPKAMPEDMVLVDCVWNKFKQGRILNMVDPKLNGVFNEREMLMVLKLGLLCSNGSPTARPSMRQVVRFLEGEVGVPDELRKPGEGGYQEGFDEFLHSLESSSFDQMNTGSYGRNRDMDSSFPSLTGTSLFSPHGKGQTM*