|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G25855 | AT | Annotation by Michelle Graham. TAIR10: Copper transport protein family | chr3:9459608-9460267 REVERSE LENGTH=112 | SoyBase | E_val: 2.00E-29 | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
KOG1603 | KOG | Copper chaperone | JGI | ISS | |
PTHR22814 | Panther | COPPER TRANSPORT PROTEIN ATOX1-RELATED | JGI | ISS | |
PTHR22814:SF59 | Panther | UNKNOWN PROTEIN | JGI | ISS | |
UniRef100_Q69N34 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein-like n=1 Tax=Oryza sativa Japonica Group RepID=Q69N34_ORYSJ | SoyBase | E_val: 2.00E-18 | ISS |
UniRef100_UPI0002337916 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI0002337916 related cluster n=1 Tax=unknown RepID=UPI0002337916 | SoyBase | E_val: 8.00E-53 | ISS |
Glyma01g20800 not represented in the dataset |
Glyma01g20800 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.01g082600 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma01g20800.2 sequence type=CDS gene model=Glyma01g20800 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTCAGAAAAGTATTGTTGCATGGTCATGAGAATCAACGTTGACTGCAATTCTTGTTGCAGAAAATTAAGGAGGATCATTCTAAGGATGAAAGCGATAGAGAACCATATGATAGAGAAGCAGCAGCGCAGGGTATTTGTGTTTGGCAGATTTGAACCAGGGGATGTTGCAATAAAGATAAAGAAAAAGATGAACCGAAGAGTTGAGATCCTTGAAGTTCAAGAAATGGAGGGTGAAGCTCAAAATGAAGGAGAATAG
>Glyma01g20800.2 sequence type=predicted peptide gene model=Glyma01g20800 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSEKYCCMVMRINVDCNSCCRKLRRIILRMKAIENHMIEKQQRRVFVFGRFEPGDVAIKIKKKMNRRVEILEVQEMEGEAQNEGE*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||