Glyma01g10326 - SoyBase

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Report for Sequence Feature Glyma01g10326

Feature Type:	gene_model
Chromosome:	Gm01
Start:	13416711
stop:	13417813
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma01g10326

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G72880	AT	Annotation by Michelle Graham. TAIR10: Survival protein SurE-like phosphatase/nucleotidase \| chr1:27423678-27425928 REVERSE LENGTH=385	SoyBase	E_val: 2.00E-57	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0003993	GO-mf	Annotation by Michelle Graham. GO Molecular Function: acid phosphatase activity	SoyBase	N/A	ISS
GO:0016787	GO-mf	Annotation by Michelle Graham. GO Molecular Function: hydrolase activity	SoyBase	N/A	ISS
PF01975	PFAM	Survival protein SurE	JGI		ISS
UniRef100_G7IS42	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: 5'-nucleotidase surE n=1 Tax=Medicago truncatula RepID=G7IS42_MEDTR	SoyBase	E_val: 8.00E-70	ISS
UniRef100_UPI000233770B	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233770B related cluster n=1 Tax=unknown RepID=UPI000233770B	SoyBase	E_val: 2.00E-87	ISS

Expression Patterns of Glyma01g10326

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma01g10326 not represented in the dataset	Glyma01g10326 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma01g10326 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.01g072700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma01g10326

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma01g10326

Limit To All Plant Sequences

>Glyma01g10326.1   sequence type=CDS   gene model=Glyma01g10326   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGACTAATGCAAACTGTCCGCAAGAATCATTGCATTCAGTCTTAAACGGAAATCTAAGGTTCTACTCAGGGGTTGTTGCCGGAGCTAGGGAAGCGTTGTTATGTGGTGTATCGACATTATCAATATCATTAAATTGGAAGAAGGATGAAAGTCAGGAAAACAATTTCAAGGATGTTGTATCAGTCTGTTTACTATTAATAAACACAACTATTAGGGATGTTGAAAAGGGAACTTTTCCCAAAAGCTGCCTTTTAAATGTAGAAATTTCGACATCTCCTTTGAGTAACAAGGGCTTCAAATTAACCAAGCAAAGTATGTGGAGATCCACTCCAAACTGGCTAGCTGTTTCCACCAGCCATTATCCAACCGGTCATTTCTTGGCCAATCAAGGTGGCCTTGGTCTTCAGTTTGCACAGCTTGGCCAAGATGCTTCTGTAGCTGTAGGTGTCCTACATACATATCATGTCTTTTTGTTCTCTGTAATCTGA

Predicted protein sequences of Glyma01g10326

Limit To All Plant Sequences

>Glyma01g10326.1   sequence type=predicted peptide   gene model=Glyma01g10326   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MTNANCPQESLHSVLNGNLRFYSGVVAGAREALLCGVSTLSISLNWKKDESQENNFKDVVSVCLLLINTTIRDVEKGTFPKSCLLNVEISTSPLSNKGFKLTKQSMWRSTPNWLAVSTSHYPTGHFLANQGGLGLQFAQLGQDASVAVGVLHTYHVFLFSVI*

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