Report for Sequence Feature Glyma01g09190
Feature Type: gene_model
Chromosome: Gm01
Start: 10916140
stop: 10919654
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma01g09190
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G03980 AT
Annotation by Michelle Graham. TAIR10: GDSL-like Lipase/Acylhydrolase superfamily protein | chr2:1260907-1262408 FORWARD LENGTH=367
SoyBase E_val: 1.00E-88 ISS
GO:0006629 GO-bp
Annotation by Michelle Graham. GO Biological Process: lipid metabolic process
SoyBase N/A ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
GO:0016788 GO-mf
Annotation by Michelle Graham. GO Molecular Function: hydrolase activity, acting on ester bonds
SoyBase N/A ISS
PTHR22835 Panther
ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN
JGI ISS
PTHR22835:SF39 Panther
LATERAL SIGNALING TARGET PROTEIN 2
JGI ISS
PF00657 PFAM
GDSL-like Lipase/Acylhydrolase
JGI ISS
UniRef100_I1J668 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1J668_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q2HVX7 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Lipolytic enzyme, G-D-S-L n=1 Tax=Medicago truncatula RepID=Q2HVX7_MEDTR
SoyBase E_val: 5.00E-102 ISS
Expression Patterns of Glyma01g09190
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma01g09190
Paralog Evidence Comments
Glyma02g13720 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma01g09190 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.01g067200 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma01g09190
Coding sequences of Glyma01g09190
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma01g09190.1 sequence type=CDS gene model=Glyma01g09190 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAATAGCCAGTATCTCATCACCCTTTCTTTTGTGTTATTAACTTTGGTTTTACCCCTATCATCAGCAACGAACTCATTTGAGTCGTATGACACAAAAAAGTTTCCAGCTTTGTATGTTTTTGGTGATTCCCTGATTGATTGTGGGAACAACAATCATCTTCCAAGCGGTGGAGCAGATTATCTTCCTTATGGTATAGATTTTATGGGTGGCAACAAACCTACCGGTCGTGCCACTAATGGAAAAACCGTGGCTGATTTCCTTGCTATGCATCTAGGACTACCCTTTGTCCGTCCCTACTTGGATCTTACAAATCATCAAAGGAACAAAATCAGCACTGGCATTAATTATGCATCTGGTGGGTCTGGCATTCTTCCAGACACCAACAACGTCACGTCTTTGACACTTGACAAGCAAATTAAGTTCTTCCATAGTACTGTTAAGCATAATTTGCATAAGGTGTTCAAAGAGAAAGAAGAAATTGAGATGCATTTATCTGAATCCTTGTTTTTTGTCTCTACGGGGGTGAACGATTACTTCCATAATGGAACCTTCCGCGGCAACAAAAACCTTGCTTTGTTCCTGCTAAATGAATTCACCCTACGCATCCAGAGAATATATAATCTAGGAGCAAGAAAGTTTTTGGTGAACAACATTCCCCCAGCAGGTTGCTTTCCCTCAAAAGCTATCCGCGCTAGACCAAGAGGAAAATGTGATGAGAAAATAAACAAAGCTATCAGCTTTTACAATAGAAGGTTGCCTGAAGTGCTCCATGAGTTGCAGTCAAAGCTTCCTGGCTTCAGCTTTGTACATGCAGATCTCTTTGGGTTCCTTAAGGGGGTGAGGGAAACTGGAAAGAGTTATGGGATAGTGGAAACATGGAAGCCTTGCTGCCCTAACACCATTTATGGTGATCTTAAATGCCATCCCAACACTGTTCCTTGTCCAAACAGAGATACTCATCTTTTCTGGGATGAACACCCCACACAAATTGTAAACCAAATATATGCATGGCTTTGCTTCAATGAGGGGACCATTTGCAAGTCCTGGGGCCTCAAACTAATCTACCATGCCTAG
Predicted protein sequences of Glyma01g09190
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma01g09190.1 sequence type=predicted peptide gene model=Glyma01g09190 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MNSQYLITLSFVLLTLVLPLSSATNSFESYDTKKFPALYVFGDSLIDCGNNNHLPSGGADYLPYGIDFMGGNKPTGRATNGKTVADFLAMHLGLPFVRPYLDLTNHQRNKISTGINYASGGSGILPDTNNVTSLTLDKQIKFFHSTVKHNLHKVFKEKEEIEMHLSESLFFVSTGVNDYFHNGTFRGNKNLALFLLNEFTLRIQRIYNLGARKFLVNNIPPAGCFPSKAIRARPRGKCDEKINKAISFYNRRLPEVLHELQSKLPGFSFVHADLFGFLKGVRETGKSYGIVETWKPCCPNTIYGDLKCHPNTVPCPNRDTHLFWDEHPTQIVNQIYAWLCFNEGTICKSWGLKLIYHA*