Glyma01g09160 - SoyBase

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Report for Sequence Feature Glyma01g09160

Feature Type:	gene_model
Chromosome:	Gm01
Start:	10877247
stop:	10880169
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma01g09160

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G03490	AT	Annotation by Michelle Graham. TAIR10: UDP-Glycosyltransferase superfamily protein \| chr5:871550-872947 FORWARD LENGTH=465	SoyBase	E_val: 6.00E-154	ISS
GO:0008152	GO-bp	Annotation by Michelle Graham. GO Biological Process: metabolic process	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0008194	GO-mf	Annotation by Michelle Graham. GO Molecular Function: UDP-glycosyltransferase activity	SoyBase	N/A	ISS
GO:0016757	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups	SoyBase	N/A	ISS
GO:0016758	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups	SoyBase	N/A	ISS
GO:0035251	GO-mf	Annotation by Michelle Graham. GO Molecular Function: UDP-glucosyltransferase activity	SoyBase	N/A	ISS
KOG1192	KOG	UDP-glucuronosyl and UDP-glucosyl transferase	JGI		ISS
PTHR11926	Panther	GLUCOSYL/GLUCURONOSYL TRANSFERASES	JGI		ISS
PTHR11926:SF15	Panther	UDP-GLUCURONOSYLTRANSFERASE RELATED	JGI		ISS
PF00201	PFAM	UDP-glucoronosyl and UDP-glucosyl transferase	JGI		ISS
UniRef100_Q8S9A5	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Glucosyltransferase like protein (Fragment) n=1 Tax=Vigna angularis RepID=Q8S9A5_PHAAN	SoyBase	E_val: 0	ISS
UniRef100_UPI0002337619	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI0002337619 related cluster n=1 Tax=unknown RepID=UPI0002337619	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma01g09160

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma01g09160 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.01g067100	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma01g09160

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma01g09160

Limit To All Plant Sequences

>Glyma01g09160.1   sequence type=CDS   gene model=Glyma01g09160   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAACAAAGTTCACATCCTGGCGTTCCCATACCCAGCACAGGGCCACATCCTCCCACTCCTCGACCTCATCCACCACTTAGCCCTACGAGGCCTAACCGTCACAATCATAATCACACCAAAAAACGTTCCTATCTTAAACCCTCTCTTATCCTCGCATCCAAACACGGTCCAAACTTTAGTTCTCCCATTCCCTCCCCACCCTAACATCCCCGCTGGCGCAGAGAACGTCCGTGAGGTCGGCAACAGAGGAAACTACCCCTTCATCAACGCCCTCTCCAAACTCCAACCAGAAATTATCCACTGGTTCGCAACCCACAGTAACCCTCCTGTAGCACTCGTCTCCGATTTCTTCCTCGGTTGGACTCAGCAACTCGCTTCCCAACTCAGTATTCCTAGGATCACGTTCTACTGCTCCGGCGCGTCCTTAATCGCCATCCTCCAGCGCTGCTGGAAAAATCTACACTTTTACAATTCACAGGGAGATAATAATATTATTAATTTTCCCGAAATTCCGGGAACGCCGTCGTTTAAGAGGGAGCACCTCCCCACGTTGTTCCTCCGCTACAAGGAATCGGAGCCGGAGTCTGAGTTTGTTAGAGAGAGCATGCTTCTTAACGACGCGAGCTGGGGATGCGTGTTCAACACGTTCCGCGCGTTGGAGGGTTCTTATTTGGATCACATTAAAGAAGAGTTGGGTCATAAGAGTGTGTTTTCGGTCGGGCCGTTGGGATTGGGTCGGGCTGAGTCCGACCCAAATAGAGGATCCGAGGTTTTGCGTTGGCTTGACGAGGTGGAGGAAGAAGCGTCGGTGTTGTACGTTTGCTTTGGGAGTCAGAAGTTGATGAGAAAGGAACAAATGGAAGCATTGGCGGTGGGATTAGAAAAATCCGAAACGAGATTCGTGTGGGTGGTGAAGACGGCTTCCACGAAGGAAGAAATGGATGAAGGGTTCGGGTTGGTACCGGAGGGGTTTGCGGATCGGGTTTCGGGTCGGGGCTTGGTTGTAACCGGGTGGGCCCCACAAGTGGCGATACTGAGTCACCGAGCTGTGGGGGGGTTTGTGAGTCACTGCGGATGGAACTCGGTGTTGGAGGCGATGACGAGTGGGGTTGTGATTGTGGGGTGGCCCATGGAGGCGGATCAGTTTGTGAATGCTAAGATGTTGGTGGAAGATAGAGGGCTAGGGGTGCGGGTTTGTGAAGGGTCGGATTTTGTGCCCGACCCGGATGAGTGGGGTCAGGTCGTGAAAGCGGTTATGGTTAGAGACAGTGCTGAGAAGAGAAGAGCGAAGTTGATGAGAGAGGAAGCTATTGGGGCTGTGAGGGAAGGTGGCGAGTCTTCCATGGATGTAGAGAAGCTCGTGAAATCGTTGTTGGAGCTTGGTGTTAAACAAGGATAA

Predicted protein sequences of Glyma01g09160

Limit To All Plant Sequences

>Glyma01g09160.1   sequence type=predicted peptide   gene model=Glyma01g09160   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MNKVHILAFPYPAQGHILPLLDLIHHLALRGLTVTIIITPKNVPILNPLLSSHPNTVQTLVLPFPPHPNIPAGAENVREVGNRGNYPFINALSKLQPEIIHWFATHSNPPVALVSDFFLGWTQQLASQLSIPRITFYCSGASLIAILQRCWKNLHFYNSQGDNNIINFPEIPGTPSFKREHLPTLFLRYKESEPESEFVRESMLLNDASWGCVFNTFRALEGSYLDHIKEELGHKSVFSVGPLGLGRAESDPNRGSEVLRWLDEVEEEASVLYVCFGSQKLMRKEQMEALAVGLEKSETRFVWVVKTASTKEEMDEGFGLVPEGFADRVSGRGLVVTGWAPQVAILSHRAVGGFVSHCGWNSVLEAMTSGVVIVGWPMEADQFVNAKMLVEDRGLGVRVCEGSDFVPDPDEWGQVVKAVMVRDSAEKRRAKLMREEAIGAVREGGESSMDVEKLVKSLLELGVKQG*

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