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Report for Sequence Feature Glyma01g08745

Feature Type:gene_model
Chromosome:Gm01
Start:10293655
stop:10294541
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G59120AT Annotation by Michelle Graham. TAIR10: subtilase 4.13 | chr5:23864897-23868020 REVERSE LENGTH=732 SoyBaseE_val: 1.00E-86ISS
GO:0006508GO-bp Annotation by Michelle Graham. GO Biological Process: proteolysis SoyBaseN/AISS
GO:0008152GO-bp Annotation by Michelle Graham. GO Biological Process: metabolic process SoyBaseN/AISS
GO:0043086GO-bp Annotation by Michelle Graham. GO Biological Process: negative regulation of catalytic activity SoyBaseN/AISS
GO:0048441GO-bp Annotation by Michelle Graham. GO Biological Process: petal development SoyBaseN/AISS
GO:0048443GO-bp Annotation by Michelle Graham. GO Biological Process: stamen development SoyBaseN/AISS
GO:0005576GO-cc Annotation by Michelle Graham. GO Cellular Compartment: extracellular region SoyBaseN/AISS
GO:0005618GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cell wall SoyBaseN/AISS
GO:0004252GO-mf Annotation by Michelle Graham. GO Molecular Function: serine-type endopeptidase activity SoyBaseN/AISS
GO:0042802GO-mf Annotation by Michelle Graham. GO Molecular Function: identical protein binding SoyBaseN/AISS
PTHR10795Panther SUBTILISIN/KEXIN-RELATED SERINE PROTEASE JGI ISS
PTHR10795:SF17Panther gb def: possible protease [sinorhizobium meliloti] JGI ISS
PF00082PFAM Subtilase family JGI ISS
UniRef100_I1MZ83UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MZ83_SOYBN SoyBaseE_val: 4.00E-164ISS
UniRef100_Q9ZTT3UniRef Annotation by Michelle Graham. Most informative UniRef hit: Subtilisin-like protease C1 n=1 Tax=Glycine max RepID=Q9ZTT3_SOYBN SoyBaseE_val: 1.00E-159ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma01g08745 not represented in the dataset

Glyma01g08745 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma01g08745.1   sequence type=CDS   gene model=Glyma01g08745   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GGACATGATAGAGTTGTAGTTGTCTTTCCTAATAAAAAGAAGCAACTCCATACAACAAGGTCATGGGATTTTATTGGCTTTCCACTACAAGCAAATAGAGCACCAACTGAAAGTGATGTCATCATTGCAGTACTTGACTCTGTAATTTGGCGAGAATCCGAGAGCTTCAATGACAAAGGATTTGGTCCACCACCAAGTAAATGGAAGGGCACCTGCCAAACTTCTAAAAATTTCACATGCAATAGTAAAATCATTGGGGCTAAGATTTACAAAGCTGGTGGATTTTTTAGCGATGATGATCCAAAATCTGTGAGGGATATAGATGGTCATGGCACTTATGTAGCATCAACAGCAGCTGGGAACCCAGTTAGCACAACTAGCATGTTAGGCCTTGGTCGAGGAACACCAAGAGGTGCTGCAACAAAAGCATGCATTGTTGTGTATAAAGTGTGTTGGTTTGATGGTTGTTCTGATGCAGACATACTTGCTGCATTTGATGATGCAATTGCAGATGGGGTTGACATAATAACAGTTTCTCTTGGAGGGTTCAGTGATGAAAACTACTTTAGAGATGTAATAGCCATTGGAGCATTTCATGCTATGAGAAATGGAGTGTTGACAGTAACTTCCGCAGGAAACAATGGTCCACGACCTTCCTCCCTATCCAACTTTTTGCCTTGGTCAATTACTGTGGCTGCTAGTACCATAGACAGGAAGTTTGTTACCAAGGTTGAATTAGGTAACAGGATCACCTATGAGGTAAATTACCTTCTCTATCCTATTTGA

>Glyma01g08745.1   sequence type=predicted peptide   gene model=Glyma01g08745   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GHDRVVVVFPNKKKQLHTTRSWDFIGFPLQANRAPTESDVIIAVLDSVIWRESESFNDKGFGPPPSKWKGTCQTSKNFTCNSKIIGAKIYKAGGFFSDDDPKSVRDIDGHGTYVASTAAGNPVSTTSMLGLGRGTPRGAATKACIVVYKVCWFDGCSDADILAAFDDAIADGVDIITVSLGGFSDENYFRDVIAIGAFHAMRNGVLTVTSAGNNGPRPSSLSNFLPWSITVAASTIDRKFVTKVELGNRITYEVNYLLYPI*







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