SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G69020 | AT | Annotation by Michelle Graham. TAIR10: Prolyl oligopeptidase family protein | chr1:25943949-25947197 REVERSE LENGTH=757 | SoyBase | E_val: 8.00E-106 | ISS |
| GO:0006508 | GO-bp | Annotation by Michelle Graham. GO Biological Process: proteolysis | SoyBase | N/A | ISS |
| GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
| GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
| GO:0004252 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: serine-type endopeptidase activity | SoyBase | N/A | ISS |
| GO:0008236 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: serine-type peptidase activity | SoyBase | N/A | ISS |
| GO:0070008 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: serine-type exopeptidase activity | SoyBase | N/A | ISS |
| PTHR11757 | Panther | PROTEASE FAMILY S9A OLIGOPEPTIDASE | JGI | ISS | |
| PTHR11757:SF3 | Panther | OLIGOPEPTIDASE B (LYSYL AND ARGININYL OLIGOPEPTIDASE) | JGI | ISS | |
| PF02897 | PFAM | Prolyl oligopeptidase, N-terminal beta-propeller domain | JGI | ISS | |
| UniRef100_G7JZA5 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Prolyl endopeptidase-like protein n=1 Tax=Medicago truncatula RepID=G7JZA5_MEDTR | SoyBase | E_val: 2.00E-173 | ISS |
| UniRef100_I1J656 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1J656_SOYBN | SoyBase | E_val: 0 | ISS |
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Glyma01g08610 not represented in the dataset |
Glyma01g08610 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.01g065500 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma01g08610.2 sequence type=CDS gene model=Glyma01g08610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCATTATTCCGCGCACTTGCTCACTCCAAAAACAGCACACTGTCACTCACCAGGTCATGCCATACCGTCATCACATTCACCCCCTCTTCCGTGTGCCGGCGGCGGAGCAACTCTCCGGCACCGCCGCAATCTCCGCCGTCACCAAAGAAGGTGCCGTTCACAGTTTCGGTTCACGGGAAGACTTGGCAGGACCCCTATCACTGGATGTCCAACACCGACGACCCGAATCTGTTGGACCATCTCAACCGCGAAAACGGCTACGCCGATGCGTTCATGGCCGACACCGTCAAACTCCGTTCCGTTCTGTCGTCAGAGATGAAAGCGCGATTGCCACCCTCCGTTTCCACTCCCCCTGAGCGTTGGGGACCCTGGCTGTATTACCAGTATATTCCAGAGGGAAAGGAGTATCCTGTGCTGTGTAGGAGTCTGGAAACAGAGACTGGTTGGCTGAAGAATGCTGTTCTTCGCTATGGAATGACAAGATCAAAAAGGGAGGAGATTTTACTTGACTGGAATGAACTCGCAGAGAAATATGGGTATGTCAACGTTGGATCATGCAGAGTTTCACCTGACAACAACTACCTTGCATACACACTTGATATTTCCGGTGGTGAACGATTCACTCTCCAGATAAAAGACCTCAGAAGTGGATTAATAGATCCACAATTGGAAGTTGATGGTGCTGTTAGCTTGGCATGGGCTCAAGACGCAAGGTTCTCTGCAGAAGACTTGGATATGATCATGAGGATGATCTCCCATTATTTACTGAAAACAATTCCAGTTTTTGTTTATGTTATAGATTCGGTCAATCCATCAAATGGTTTACAAAAAATATGTAATCGTACTTCTGGTGTACAGTACTTTGTGGAACATCACTCTGGTTTATTTTATATTCTTACCAATGCTCCTATTCCTGATGCTGAATGGTCTGGTCAAGGTTATTACCTGGTTAGATGCCGAGTTGAAGATGTAGAGTCAGCTAAGTTTCAGAGTATCATCCTTCCTGATAAAGATACGAGCCTATGTGATAAGGACATTTTTAATGGATATCTGGTTCTTTTCTTCACTAAGAAAGGTCTTCCTCTGCCATGCTCATTGAACTTACCTATGCAAATTGATTTCAAGGTAATAGTCTACTAA
>Glyma01g08610.2 sequence type=predicted peptide gene model=Glyma01g08610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MALFRALAHSKNSTLSLTRSCHTVITFTPSSVCRRRSNSPAPPQSPPSPKKVPFTVSVHGKTWQDPYHWMSNTDDPNLLDHLNRENGYADAFMADTVKLRSVLSSEMKARLPPSVSTPPERWGPWLYYQYIPEGKEYPVLCRSLETETGWLKNAVLRYGMTRSKREEILLDWNELAEKYGYVNVGSCRVSPDNNYLAYTLDISGGERFTLQIKDLRSGLIDPQLEVDGAVSLAWAQDARFSAEDLDMIMRMISHYLLKTIPVFVYVIDSVNPSNGLQKICNRTSGVQYFVEHHSGLFYILTNAPIPDAEWSGQGYYLVRCRVEDVESAKFQSIILPDKDTSLCDKDIFNGYLVLFFTKKGLPLPCSLNLPMQIDFKVIVY*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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