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Report for Sequence Feature Glyma01g06774

Feature Type:gene_model
Chromosome:Gm01
Start:7193729
stop:7195967
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G15460AT Annotation by Michelle Graham. TAIR10: HCO3- transporter family | chr1:5310196-5313376 REVERSE LENGTH=683 SoyBaseE_val: 2.00E-20ISS
GO:0006820GO-bp Annotation by Michelle Graham. GO Biological Process: anion transport SoyBaseN/AISS
GO:0046713GO-bp Annotation by Michelle Graham. GO Biological Process: borate transport SoyBaseN/AISS
GO:0080029GO-bp Annotation by Michelle Graham. GO Biological Process: cellular response to boron-containing substance levels SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0016021GO-cc Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane SoyBaseN/AISS
GO:0005452GO-mf Annotation by Michelle Graham. GO Molecular Function: inorganic anion exchanger activity SoyBaseN/AISS
GO:0015301GO-mf Annotation by Michelle Graham. GO Molecular Function: anion:anion antiporter activity SoyBaseN/AISS
GO:0080139GO-mf Annotation by Michelle Graham. GO Molecular Function: borate efflux transmembrane transporter activity SoyBaseN/AISS
PTHR11453Panther ANION EXCHANGE PROTEIN JGI ISS
PTHR11453:SF6Panther ANION EXCHANGE PROTEIN-RELATED JGI ISS
UniRef100_B9GKZ0UniRef Annotation by Michelle Graham. Most informative UniRef hit: Anion exchanger family protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GKZ0_POPTR SoyBaseE_val: 4.00E-19ISS
UniRef100_I1MCI9UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MCI9_SOYBN SoyBaseE_val: 5.00E-20ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma01g06774 not represented in the dataset

Glyma01g06774 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.01g055700 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma01g06774.2   sequence type=transcript   gene model=Glyma01g06774   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GTTCATATAAAAAGAAATATCCTGAGCCTAGAAAGTGAATGTGCTGTTTTGCTCATTCAAATGTTCCTCCAAGTCAAGTCCATATGGTTTATCTCGGAGGAGTGAATCTGAGAACACAAGGCTGGTTTGCACTGCTATATCATCTATTGGTATAAGGTGAATTTACTTTGTGTTCTCAGGTCACCCCTTTGAGCCAACCTGTTGACATATACCAAAACATGAATCCTTCTCACTTTGCTTCTCATCTTTTTTTATCACCACATCTTGTTATAATGTCTTCAGATTTCAGGAAATGTTGCAGGCTGGATTTGTGGATGGTATAGACATCAATGTTGTTATTTTTATACTTCATTTTTTATACTTTAATTTCCTCTATACCTCACTTTTATTGGAGAAAAAAGAGAATAGAAAATAGTGGATTTCTCTTCTTTTTTTCAATCAAAGGGAGTTGTAGGGGAAAAGTTTAGAAAATGGCGTGTAAGAATAACATCATTGTGGAAATATAAAGTGGCTGCAATCATTTGCACAATTTCAAGTTGAAGAGAAAATGACAACTAGTGCTTATAACATATAAGCATCAGATTTAGGAATACAAGAGGAAGATTCTATTGGCACGTATTTTCTTCTCTAGTGCGAGACACAAGACATAGCCTTCCTTTTTCTACTTTTTTTTTCAAGTTGATGACAATATAATAGAGTTTAACTATGGTATAAGTTGGGAGGTTTCCTTTTTTCTTTTTTTGATACAGAAAAATTAAGGACCCTTGAATGCTAAAGCAGAAATGCAGTTACTAGCTACACGAGTTTCCAACAAAGTACATGTTTGAAGTTGTCCTTTTGCTACCTATTAAACATGAGGAATACAGATATCATAGTTGTCTTCAATTCTGATCTACCAATACATATTCTTTTTTTACTATACTATCAATTTTATGTCGCACCTACTCTGATAAGAATATATTCTACATTCAACAATTGACCTCCCTACACAACTGCCCCATCAAAAATTGCAAACAGAATAATGAAAAGTTTGCTAAATCAGCACACAACACACAACCACTTCCTTTTGTCAATCAATAAATGGCATCATACATAACATTAGTATACATAACTTCCACATTTCACGCACTGATCAACTTAATATAGAGTTTGCCTTCTTTAATTTGCATGGAATCCAGAAGGTTGTCAAAGCCAAATGGGAACCAACAAACTTGCAGTCATCATACCAAACTTCTGCAGAGCATTCAGCATTGTGTATTCCTTTAGATTCACATGCATAATGCATTTGATTATGCTGTCTTTGATATGGTACCATGATCCTTAAATGCAAAAAGGTCATAGTCTACCAAGGTTAAAATCTATGATAAAAGAATGTAATACTACCATGGTTCCAAAGATTTGGAAGAGCACTGTGTTATAGAGAAGATTGGACTAGTGCTCTCTATTCAGGAATCAGATTTACGAGGGTTGCAGATGAGCTTTTTGGCATGTTGGTGTTGTTCATTCAAGAATATGAAGGGAATGGTAAAGGAGTTTCATGTTCCTAATAATGAAGATCAGACAACAGAACAAAATCAATTTCAGTGGCTCTATGGAAACGGGTTACTGGGAATTATATTCTCATTTGGCCTTCTCTATACTGCATTGAAGAGCAGAAGAACGAGGTCCTGGCTATACAGGGACTGATCAAACCTCGAGACAAAATCAATTGTGAAATCTGAATCAACAATGTTTAATTAAAACATGCATTGGTGAAGATTTGATATGTATGTGATTGCACGTACCATGAGAAAGAAAAAAAAAAAAAAAGCAGAGCTACAAAACATTATGTTGCTGAATTTCCAAACCTATGTGTGATTTACATTTAGATAAAAGCTAAGCATCATACTTTGGCAATCAAAATCACTAAGTTATCTACTGCAGCATGAATATATTATGAAGTAGCATTTCAG

>Glyma01g06774.1   sequence type=CDS   gene model=Glyma01g06774   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCTGGTAATATCATCAACAGATTTACGAGGGTTGCAGATGAGCTTTTTGGCATGTTGGTGTTGTTCATTCAAGAATATGAAGGGAATGGTAAAGGAGTTTCATGTTCCTAATAATGAAGATCAGACAACAGAACAAAATCAATTTCAGTGGCTCTATGGAAACGGGTTACTGGGAATTATATTCTCATTTGGCCTTCTCTATACTGCATTGAAGAGCAGAAGAACGAGGTCCTGGCTATACAGGGACTGA

>Glyma01g06774.2   sequence type=CDS   gene model=Glyma01g06774   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGCTTTTTGGCATGTTGGTGTTGTTCATTCAAGAATATGAAGGGAATGGTAAAGGAGTTTCATGTTCCTAATAATGAAGATCAGACAACAGAACAAAATCAATTTCAGTGGCTCTATGGAAACGGGTTACTGGGAATTATATTCTCATTTGGCCTTCTCTATACTGCATTGAAGAGCAGAAGAACGAGGTCCTGGCTATACAGGGACTGA

>Glyma01g06774.1   sequence type=predicted peptide   gene model=Glyma01g06774   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLVISSTDLRGLQMSFLACWCCSFKNMKGMVKEFHVPNNEDQTTEQNQFQWLYGNGLLGIIFSFGLLYTALKSRRTRSWLYRD*

>Glyma01g06774.2   sequence type=predicted peptide   gene model=Glyma01g06774   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSFLACWCCSFKNMKGMVKEFHVPNNEDQTTEQNQFQWLYGNGLLGIIFSFGLLYTALKSRRTRSWLYRD*







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