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Report for Sequence Feature Glyma.20g245300

Feature Type:gene_model
Chromosome:Gm20
Start:47515172
stop:47522625
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g245300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G74040.1AT IMS1,IPMS2,MAML-3 JGI N/AIEA
2.3.3.13EC 2-isopropylmalate synthase JGI N/AIEA
GO:0009098GO-bp leucine biosynthetic process JGI N/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0003852GO-mf 2-isopropylmalate synthase activity JGI N/AIEA
PTHR10277PantherFam HOMOCITRATE SYNTHASE-RELATED JGI N/AIEA
PF00682Pfam HMGL-like JGI N/AIEA
PF08502Pfam LeuA allosteric (dimerisation) domain JGI N/AIEA

Gene model name correspondences to Glyma.20g245300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g38950 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g245300
>Glyma.20g245300.2 sequence-type=CDS polypeptide=Glyma.20g245300.2.p locus=Glyma.20g245300 id=Glyma.20g245300.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCACCGTGATCCGCAATCCTATCCTCTTTCCCTCCACCTCTCACCGCCCCAACCAAAACCACAGCAACAACACATTCCTCATTTTCCGCTTCCCTCAAACCTCACGCTCTTCTCTCCACTCCAAATCCCGATTCGCCTTTTCCTGCTCCCAATCGGAGCCTCCTCCTCCTTCTCCTTCTGCTTCTCCTCGACGGCGTCCTCCGTACATCCCGAACCGCATTCCTGACCCTTCCTATGTCCGCATTTTCGACACCACTCTCCGCGACGGCGAGCAGTCCCCGGGCGCCTCCATGACCTCCAAGGAGAAGCTGGATGTGGCGCGGCAGCTTGCCAAGCTCGGCGTCGACATCATCGAGGCCGGCTTCCCTGCCGCCTCCAAGGATGACTTCGAGGCCGTCAAAATGATCGCCCAAGAGGTCGGCAACGCCGTTGACGACGACGGATACGTCCCCGTCATCTGTGGCCTCTCCCGCTGCAACGAGAAGGACATTCGAACAGCCTGGGAGGCCGTCAAGTACGCCAAGAGGCCCAGGATTCACACCTTCATCGCCACCAGCGCCATTCACATGGAGTACAAGTTGAGAATGTCCAAAGACAAGGTCGTCGACATTGCCCGCAATATGGTCAAGTTCGCTCGTAGCTTGGGCTGCGAAGATGTCGAGTTCAGTCCTGAAGATGCTGGAAGGTCGGATAGGGAGTTTCTTTATGAAATTCTTGGAGAAGTTATTAAGGCCGGGGCCACCACGCTCAACATACCTGACACTGTTGGTATAACTATGCCCAGTGAATTTGGAAAGTTGATTGCTGATATTAAAGCTAATACCCCTGGAATTGAAAATGTTATTATTTCCACCCACTGCCAGAATGATCTCGGACTTTCTACTGCAAACACTATAGAGGGTGCGCGTGCTGGTGCAAGGCAACTGGAAGTGACGATTAATGGGATTGGTGAAAGGGCTGGAAATGCCTCCCTAGAAGAGGTTGTGATGGCCTTGAGATGCGGAGCACATGTCAATGGCAATCTCTACACTGGAATTAATACGAAGCACATCTTTCTGACGAGCAGGATGGTCGAAGAGTACACTGGTTTGCAGTTACAGCCACACAAGGCTCTTGTGGGAGCTAATGCCTTCGCCCATGAAAGTGGCATACATCAGGATGGAATGCTAAAACACAAAGGTACATATGAAATAATATCACCTGAGGACATTGGACTTGAAAGAACCAATGAAGCTGGTATTGTACTGGGGAAGCTTAGTGGACGCCATGCTTTGAGAAAGCGACTTGAAGAGCTTGGTTATGAACTTAGTGACGACCAAGTTCAGACTTTATTTTGGCGTTTTAAAGCAGTGGCTGAGCAAAAAAAGAGGGTTACTGATGCTGACCTCAGAGCATTGGTATCAGATGAAGTTTTTCAAGCAGAGCCTGTCTGGAAACTTGGTGATTTGCAGGTGACTTGTGGAACTCTTGGCCTTTCTACAGCAACTGTCAAACTTTTGAGTAGTGATGGTAGCACACATGTTGCTTGTTCTGTTGGTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAGGTTTGA

>Glyma.20g245300.3 sequence-type=CDS polypeptide=Glyma.20g245300.3.p locus=Glyma.20g245300 id=Glyma.20g245300.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCACCGTGATCCGCAATCCTATCCTCTTTCCCTCCACCTCTCACCGCCCCAACCAAAACCACAGCAACAACACATTCCTCATTTTCCGCTTCCCTCAAACCTCACGCTCTTCTCTCCACTCCAAATCCCGATTCGCCTTTTCCTGCTCCCAATCGGAGCCTCCTCCTCCTTCTCCTTCTGCTTCTCCTCGACGGCGTCCTCCGTACATCCCGAACCGCATTCCTGACCCTTCCTATGTCCGCATTTTCGACACCACTCTCCGCGACGGCGAGCAGTCCCCGGGCGCCTCCATGACCTCCAAGGAGAAGCTGGATGTGGCGCGGCAGCTTGCCAAGCTCGGCGTCGACATCATCGAGGCCGGCTTCCCTGCCGCCTCCAAGGATGACTTCGAGGCCGTCAAAATGATCGCCCAAGAGGTCGGCAACGCCGTTGACGACGACGGATACGTCCCCGTCATCTGTGGCCTCTCCCGCTGCAACGAGAAGGACATTCGAACAGCCTGGGAGGCCGTCAAGTACGCCAAGAGGCCCAGGATTCACACCTTCATCGCCACCAGCGCCATTCACATGGAGTACAAGTTGAGAATGTCCAAAGACAAGGTCGTCGACATTGCCCGCAATATGGTCAAGTTCGCTCGTAGCTTGGGCTGCGAAGATGTCGAGTTCAGTCCTGAAGATGCTGGAAGGTCGGATAGGGAGTTTCTTTATGAAATTCTTGGAGAAGTTATTAAGGCCGGGGCCACCACGCTCAACATACCTGACACTGTTGGTATAACTATGCCCAGTGAATTTGGAAAGTTGATTGCTGATATTAAAGCTAATACCCCTGGAATTGAAAATGTTATTATTTCCACCCACTGCCAGAATGATCTCGGACTTTCTACTGCAAACACTATAGAGGGTGCGCGTGCTGGTGCAAGGCAACTGGAAGTGACGATTAATGGGATTGGTGAAAGGGCTGGAAATGCCTCCCTAGAAGAGGTTGTGATGGCCTTGAGATGCGGAGCACATGTCAATGGCAATCTCTACACTGGAATTAATACGAAGCACATCTTTCTGACGAGCAGGATGGTCGAAGAGTACACTGGTTTGCAGTTACAGCCACACAAGGCTCTTGTGGGAGCTAATGCCTTCGCCCATGAAAGTGGCATACATCAGGATGGAATGCTAAAACACAAAGGTACATATGAAATAATATCACCTGAGGACATTGGACTTGAAAGAACCAATGAAGCTGGTATTGTACTGGGGAAGCTTAGTGGACGCCATGCTTTGAGAAAGCGACTTGAAGAGCTTGGTTATGAACTTAGTGACGACCAAGTTCAGACTTTATTTTGGCGTTTTAAAGCAGTGGCTGAGCAAAAAAAGAGGGTTACTGATGCTGACCTCAGAGCATTGGTATCAGATGAAGTTTTTCAAGCAGAGCCTGTCTGGAAACTTGGTGATTTGCAGGTGACTTGTGGAACTCTTGGCCTTTCTACAGCAACTGTCAAACTTTTGAGTAGTGATGGTAGCACACATGTTGCTTGTTCTGTTGGTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAGGAGCCAGTAACACTTCTTGAGTACTCAATGAATGCAGTCACGGAAGGCATCGATGCAATTGCCACTACCCGGGTTGTGATTCGTGGGGAGAGTGAAACAAGTACTAGTACTACTCATGCTTTAACTGGAGAAGCTGTTCTTCGAACATTTAGTGGGACTGGAGCGGGAATGGATGTCGTTGTTTCCAGTGTCAAGGCCTATATTGCTGCACTAAACAAGATGTTGGGTTTCAAGGAAACATCTCCATCTGCTGAAAAAATTCCAGTTTCTTCATTGAAGATTTGA

>Glyma.20g245300.4 sequence-type=CDS polypeptide=Glyma.20g245300.4.p locus=Glyma.20g245300 id=Glyma.20g245300.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCACCGTGATCCGCAATCCTATCCTCTTTCCCTCCACCTCTCACCGCCCCAACCAAAACCACAGCAACAACACATTCCTCATTTTCCGCTTCCCTCAAACCTCACGCTCTTCTCTCCACTCCAAATCCCGATTCGCCTTTTCCTGCTCCCAATCGGAGCCTCCTCCTCCTTCTCCTTCTGCTTCTCCTCGACGGCGTCCTCCGTACATCCCGAACCGCATTCCTGACCCTTCCTATGTCCGCATTTTCGACACCACTCTCCGCGACGGCGAGCAGTCCCCGGGCGCCTCCATGACCTCCAAGGAGAAGCTGGATGTGGCGCGGCAGCTTGCCAAGCTCGGCGTCGACATCATCGAGGCCGGCTTCCCTGCCGCCTCCAAGGATGACTTCGAGGCCGTCAAAATGATCGCCCAAGAGGTCGGCAACGCCGTTGACGACGACGGATACGTCCCCGTCATCTGTGGCCTCTCCCGCTGCAACGAGAAGGACATTCGAACAGCCTGGGAGGCCGTCAAGTACGCCAAGAGGCCCAGGATTCACACCTTCATCGCCACCAGCGCCATTCACATGGAGTACAAGTTGAGAATGTCCAAAGACAAGGTCGTCGACATTGCCCGCAATATGGTCAAGTTCGCTCGTAGCTTGGGCTGCGAAGATGTCGAGTTCAGTCCTGAAGATGCTGGAAGGTCGGATAGGGAGTTTCTTTATGAAATTCTTGGAGAAGTTATTAAGGCCGGGGCCACCACGCTCAACATACCTGACACTGTTGGTATAACTATGCCCAGTGAATTTGGAAAGTTGATTGCTGATATTAAAGCTAATACCCCTGGAATTGAAAATGTTATTATTTCCACCCACTGCCAGAATGATCTCGGACTTTCTACTGCAAACACTATAGAGGGTGCGCGTGCTGGTGCAAGGCAACTGGAAGTGACGATTAATGGGATTGGTGAAAGGGCTGGAAATGCCTCCCTAGAAGAGGTTGTGATGGCCTTGAGATGCGGAGCACATGTCAATGGCAATCTCTACACTGGAATTAATACGAAGCACATCTTTCTGACGAGCAGGATGGTCGAAGAGTACACTGGTTTGCAGTTACAGCCACACAAGGCTCTTGTGGGAGCTAATGCCTTCGCCCATGAAAGTGGCATACATCAGGATGGAATGCTAAAACACAAAGGTACATATGAAATAATATCACCTGAGGACATTGGACTTGAAAGAACCAATGAAGCTGGTATTGTACTGGGGAAGCTTAGTGGACGCCATGCTTTGAGAAAGCGACTTGAAGAGCTTGGTTATGAACTTAGTGACGACCAAGTTCAGACTTTATTTTGGCGTTTTAAAGCAGTGGCTGAGCAAAAAAAGAGGGTTACTGATGCTGACCTCAGAGCATTGGTATCAGATGAAGTTTTTCAAGCAGAGCCTGTCTGGAAACTTGGTGATTTGCAGGTGACTTGTGGAACTCTTGGCCTTTCTACAGCAACTGTCAAACTTTTGAGTAGTGATGGTAGCACACATGTTGCTTGTTCTGTTGGTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAGCTGTGTTTCTCTCTTTTCCTTCTTCCCTATCCCTAA
Predicted protein sequences of Glyma.20g245300
>Glyma.20g245300.2.p sequence-type=predicted peptide transcript=Glyma.20g245300.2 locus=Glyma.20g245300 id=Glyma.20g245300.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATVIRNPILFPSTSHRPNQNHSNNTFLIFRFPQTSRSSLHSKSRFAFSCSQSEPPPPSPSASPRRRPPYIPNRIPDPSYVRIFDTTLRDGEQSPGASMTSKEKLDVARQLAKLGVDIIEAGFPAASKDDFEAVKMIAQEVGNAVDDDGYVPVICGLSRCNEKDIRTAWEAVKYAKRPRIHTFIATSAIHMEYKLRMSKDKVVDIARNMVKFARSLGCEDVEFSPEDAGRSDREFLYEILGEVIKAGATTLNIPDTVGITMPSEFGKLIADIKANTPGIENVIISTHCQNDLGLSTANTIEGARAGARQLEVTINGIGERAGNASLEEVVMALRCGAHVNGNLYTGINTKHIFLTSRMVEEYTGLQLQPHKALVGANAFAHESGIHQDGMLKHKGTYEIISPEDIGLERTNEAGIVLGKLSGRHALRKRLEELGYELSDDQVQTLFWRFKAVAEQKKRVTDADLRALVSDEVFQAEPVWKLGDLQVTCGTLGLSTATVKLLSSDGSTHVACSVGTGPVDSAYKAVDLIVKV*

>Glyma.20g245300.3.p sequence-type=predicted peptide transcript=Glyma.20g245300.3 locus=Glyma.20g245300 id=Glyma.20g245300.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATVIRNPILFPSTSHRPNQNHSNNTFLIFRFPQTSRSSLHSKSRFAFSCSQSEPPPPSPSASPRRRPPYIPNRIPDPSYVRIFDTTLRDGEQSPGASMTSKEKLDVARQLAKLGVDIIEAGFPAASKDDFEAVKMIAQEVGNAVDDDGYVPVICGLSRCNEKDIRTAWEAVKYAKRPRIHTFIATSAIHMEYKLRMSKDKVVDIARNMVKFARSLGCEDVEFSPEDAGRSDREFLYEILGEVIKAGATTLNIPDTVGITMPSEFGKLIADIKANTPGIENVIISTHCQNDLGLSTANTIEGARAGARQLEVTINGIGERAGNASLEEVVMALRCGAHVNGNLYTGINTKHIFLTSRMVEEYTGLQLQPHKALVGANAFAHESGIHQDGMLKHKGTYEIISPEDIGLERTNEAGIVLGKLSGRHALRKRLEELGYELSDDQVQTLFWRFKAVAEQKKRVTDADLRALVSDEVFQAEPVWKLGDLQVTCGTLGLSTATVKLLSSDGSTHVACSVGTGPVDSAYKAVDLIVKEPVTLLEYSMNAVTEGIDAIATTRVVIRGESETSTSTTHALTGEAVLRTFSGTGAGMDVVVSSVKAYIAALNKMLGFKETSPSAEKIPVSSLKI*

>Glyma.20g245300.4.p sequence-type=predicted peptide transcript=Glyma.20g245300.4 locus=Glyma.20g245300 id=Glyma.20g245300.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATVIRNPILFPSTSHRPNQNHSNNTFLIFRFPQTSRSSLHSKSRFAFSCSQSEPPPPSPSASPRRRPPYIPNRIPDPSYVRIFDTTLRDGEQSPGASMTSKEKLDVARQLAKLGVDIIEAGFPAASKDDFEAVKMIAQEVGNAVDDDGYVPVICGLSRCNEKDIRTAWEAVKYAKRPRIHTFIATSAIHMEYKLRMSKDKVVDIARNMVKFARSLGCEDVEFSPEDAGRSDREFLYEILGEVIKAGATTLNIPDTVGITMPSEFGKLIADIKANTPGIENVIISTHCQNDLGLSTANTIEGARAGARQLEVTINGIGERAGNASLEEVVMALRCGAHVNGNLYTGINTKHIFLTSRMVEEYTGLQLQPHKALVGANAFAHESGIHQDGMLKHKGTYEIISPEDIGLERTNEAGIVLGKLSGRHALRKRLEELGYELSDDQVQTLFWRFKAVAEQKKRVTDADLRALVSDEVFQAEPVWKLGDLQVTCGTLGLSTATVKLLSSDGSTHVACSVGTGPVDSAYKAVDLIVKLCFSLFLLPYP*






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